RNA–Protein interactions for RNA: YBR222C

PCS60, Transcript of Oxalyl-CoA synthetase, yeast

Gene PCS60, Length 1,632 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCS60	YBR222C	DSL1	P53847	754 aa		6.61	□□□□□ -1.35
PCS60	YBR222C	PNG1	Q02890	363 aa		6.61	□□□□□ -1.35
PCS60	YBR222C	SMD2	Q06217	110 aa	Known RBP	6.61	□□□□□ -1.35
PCS60	YBR222C	ARV1	Q06541	321 aa		6.61	□□□□□ -1.35
PCS60	YBR222C	BRR1	Q99177	341 aa	Predicted RBP	6.61	□□□□□ -1.35
PCS60	YBR222C	RPB4	P20433	221 aa	Predicted RBP	6.61	□□□□□ -1.35
PCS60	YBR222C	KRR1	P25586	316 aa	Predicted RBP	6.61	□□□□□ -1.35
PCS60	YBR222C	AAD3	P25612	363 aa		6.61	□□□□□ -1.35
PCS60	YBR222C	SMY1	P32364	656 aa	Known RBP	6.61	□□□□□ -1.35
PCS60	YBR222C	COY1	P34237	679 aa		6.61	□□□□□ -1.35
PCS60	YBR222C	JNM1	P36224	373 aa		6.61	□□□□□ -1.35
PCS60	YBR222C	EFM2	P38347	419 aa		6.61	□□□□□ -1.35
PCS60	YBR222C	OTU2	P38747	307 aa	Known RBP	6.61	□□□□□ -1.35
PCS60	YBR222C	HSE1	P38753	452 aa		6.61	□□□□□ -1.35
PCS60	YBR222C	TIF11	P38912	153 aa	Known RBP	6.61	□□□□□ -1.35
PCS60	YBR222C	ARB1	P40024	610 aa	Known RBP	6.61	□□□□□ -1.35
PCS60	YBR222C	SDS3	P40505	327 aa		6.61	□□□□□ -1.35
PCS60	YBR222C	ACF4	P47129	309 aa		6.61	□□□□□ -1.35
PCS60	YBR222C	RAD17	P48581	401 aa		6.61	□□□□□ -1.35
PCS60	YBR222C	ITC1	P53125	1264 aa		6.61	□□□□□ -1.35
PCS60	YBR222C	NDL1	Q06568	189 aa		6.61	□□□□□ -1.35
PCS60	YBR222C	BMS1	Q08965	1183 aa	Known RBP	6.61	□□□□□ -1.35
PCS60	YBR222C	YCF1	P39109	1515 aa	Known RBP	6.61	□□□□□ -1.35
PCS60	YBR222C	DPS1	P04802	557 aa	Known RBP	6.6	□□□□□ -1.35
PCS60	YBR222C	KAR3	P17119	729 aa		6.6	□□□□□ -1.35
PCS60	YBR222C	ACE2	P21192	770 aa		6.6	□□□□□ -1.35
PCS60	YBR222C	MRPL25	P23369	157 aa		6.6	□□□□□ -1.35
PCS60	YBR222C	PKC1	P24583	1151 aa		6.6	□□□□□ -1.35
PCS60	YBR222C	LAM1	P38851	1228 aa		6.6	□□□□□ -1.35
PCS60	YBR222C	YAP1801	P38856	637 aa		6.6	□□□□□ -1.35
PCS60	YBR222C	IRR1	P40541	1150 aa		6.6	□□□□□ -1.35
PCS60	YBR222C	SMC3	P47037	1230 aa		6.6	□□□□□ -1.35
PCS60	YBR222C	RNH1	Q04740	348 aa		6.6	□□□□□ -1.35
PCS60	YBR222C	PMT7	Q06644	662 aa		6.6	□□□□□ -1.35
PCS60	YBR222C	SKI3	P17883	1432 aa	Known RBP	6.59	□□□□□ -1.35
PCS60	YBR222C	PET123	P17558	318 aa		6.59	□□□□□ -1.35
PCS60	YBR222C	HNM1	P19807	563 aa		6.59	□□□□□ -1.35
PCS60	YBR222C	SRP54	P20424	541 aa	Known RBP	6.59	□□□□□ -1.35
PCS60	YBR222C	VPH1	P32563	840 aa	Known RBP	6.59	□□□□□ -1.35
PCS60	YBR222C	SRP40	P32583	406 aa	Predicted RBP	6.59	□□□□□ -1.35
PCS60	YBR222C	YGR016W	P53209	190 aa		6.59	□□□□□ -1.35
PCS60	YBR222C	TFB3	Q03290	321 aa		6.59	□□□□□ -1.35
PCS60	YBR222C	ATG26	Q06321	1198 aa		6.59	□□□□□ -1.35
PCS60	YBR222C	UTP4	Q06679	776 aa	Known RBP	6.59	□□□□□ -1.35
PCS60	YBR222C	YGR161W-C	Q3E744	92 aa		6.59	□□□□□ -1.35
PCS60	YBR222C	INH1	P01097	85 aa		6.58	□□□□□ -1.36
PCS60	YBR222C	YKL091C	P33324	310 aa	Known RBP	6.58	□□□□□ -1.36
PCS60	YBR222C	STS1	P38637	319 aa		6.58	□□□□□ -1.36
PCS60	YBR222C	YER034W	P40022	185 aa	Known RBP	6.58	□□□□□ -1.36
PCS60	YBR222C	MAM1	P40065	302 aa		6.58	□□□□□ -1.36
PCS60	YBR222C	YNL050C	P53952	270 aa		6.58	□□□□□ -1.36
PCS60	YBR222C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	6.58	□□□□□ -1.36	not detected
PCS60	YBR222C	SNZ1	Q03148	297 aa		6.58	□□□□□ -1.36
PCS60	YBR222C	MRD1	Q06106	887 aa	Known RBP	6.58	□□□□□ -1.36
PCS60	YBR222C	TOM70	P07213	617 aa	Known RBP	6.58	□□□□□ -1.36
PCS60	YBR222C	KEX2	P13134	814 aa		6.58	□□□□□ -1.36
PCS60	YBR222C	MEF1	P25039	761 aa		6.58	□□□□□ -1.36
PCS60	YBR222C	TPD3	P31383	635 aa		6.58	□□□□□ -1.36
PCS60	YBR222C	MRE11	P32829	692 aa		6.58	□□□□□ -1.36
PCS60	YBR222C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	6.58	□□□□□ -1.36	not detected
PCS60	YBR222C	VPS41	P38959	992 aa		6.58	□□□□□ -1.36
PCS60	YBR222C	IPL1	P38991	367 aa		6.58	□□□□□ -1.36
PCS60	YBR222C	UTP18	P40362	594 aa	Predicted RBP	6.58	□□□□□ -1.36
PCS60	YBR222C	BTN2	P53286	410 aa		6.58	□□□□□ -1.36
PCS60	YBR222C	HEH2	Q03281	663 aa		6.58	□□□□□ -1.36
PCS60	YBR222C	SPP382	Q06411	708 aa	Predicted RBP	6.58	□□□□□ -1.36
PCS60	YBR222C	YLR352W	Q06479	807 aa		6.58	□□□□□ -1.36
PCS60	YBR222C	VIP1	Q06685	1146 aa	Known RBP	6.58	□□□□□ -1.36
PCS60	YBR222C	MDM38	Q08179	573 aa		6.58	□□□□□ -1.36
PCS60	YBR222C	HAT1	Q12341	374 aa		6.58	□□□□□ -1.36
PCS60	YBR222C	TUF1	P02992	437 aa	Known RBP	6.57	□□□□□ -1.36
PCS60	YBR222C	TPM1	P17536	199 aa	Known RBP	6.57	□□□□□ -1.36
PCS60	YBR222C	TTI1	P36097	1038 aa		6.57	□□□□□ -1.36
PCS60	YBR222C	CAJ1	P39101	391 aa		6.57	□□□□□ -1.36
PCS60	YBR222C	SWD1	P39706	426 aa		6.57	□□□□□ -1.36
PCS60	YBR222C	RTT105	P40063	208 aa		6.57	□□□□□ -1.36
PCS60	YBR222C	SET2	P46995	733 aa	Known RBP	6.57	□□□□□ -1.36
PCS60	YBR222C	HOP2	P53187	214 aa		6.57	□□□□□ -1.36
PCS60	YBR222C	HOL1	P53389	586 aa		6.57	□□□□□ -1.36
PCS60	YBR222C	YML119W	Q03208	357 aa		6.57	□□□□□ -1.36
PCS60	YBR222C	CWC21	Q03375	135 aa	Known RBP	6.57	□□□□□ -1.36
PCS60	YBR222C	ATG16	Q03818	150 aa		6.57	□□□□□ -1.36
PCS60	YBR222C	YLH47	Q06493	454 aa		6.57	□□□□□ -1.36
PCS60	YBR222C	VID27	P40157	782 aa		6.56	□□□□□ -1.36
PCS60	YBR222C	RSC1	P53236	928 aa		6.56	□□□□□ -1.36
PCS60	YBR222C	RAD33	Q04231	177 aa		6.56	□□□□□ -1.36
PCS60	YBR222C	DBP9	Q06218	594 aa	Known RBP	6.56	□□□□□ -1.36
PCS60	YBR222C	SWA2	Q06677	668 aa		6.56	□□□□□ -1.36
PCS60	YBR222C	CSR1	Q06705	408 aa	Known RBP	6.56	□□□□□ -1.36
PCS60	YBR222C	MPC54	Q08550	464 aa		6.56	□□□□□ -1.36
PCS60	YBR222C	RRI2	Q12348	645 aa		6.56	□□□□□ -1.36
PCS60	YBR222C	LSO1	Q3E827	93 aa		6.56	□□□□□ -1.36
PCS60	YBR222C	SSK22	P25390	1331 aa	Predicted RBP	6.55	□□□□□ -1.36
PCS60	YBR222C	MPH2	P0CD99	609 aa		6.55	□□□□□ -1.36
PCS60	YBR222C	BUD14	P27637	709 aa		6.55	□□□□□ -1.36
PCS60	YBR222C	PSO2	P30620	661 aa		6.55	□□□□□ -1.36
PCS60	YBR222C	STO1	P34160	861 aa	Known RBP	6.55	□□□□□ -1.36
PCS60	YBR222C	UBP14	P38237	781 aa	Known RBP	6.55	□□□□□ -1.36
PCS60	YBR222C	ULI1	P43604	169 aa		6.55	□□□□□ -1.36
PCS60	YBR222C	YJR142W	P47173	342 aa		6.55	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 82.3 ms