RNA–Protein interactions for RNA: ENSMUST00000227819.1

Ldb3-207, Transcript of LIM domain-binding protein 3, mousemouse

BASIC

Gene Ldb3, Length 1,499 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-207ENSMUST00000227819 Os9Q8K2C7 672 aa20.24■□□□□ 0.83
Ldb3-207ENSMUST00000227819 Slc52a2Q9D8F3 450 aa20.24■□□□□ 0.83
Ldb3-207ENSMUST00000227819 Adamts13Q769J6 1426 aa20.24■□□□□ 0.83
Ldb3-207ENSMUST00000227819 D430041D05RikF6ZGR6 1678 aa20.24■□□□□ 0.83
Ldb3-207ENSMUST00000227819 Q3UJC8 639 aa20.24■□□□□ 0.83
Ldb3-207ENSMUST00000227819 Usp32F8VPZ3 1604 aa20.23■□□□□ 0.83
Ldb3-207ENSMUST00000227819 Cep170bQ80U49 1574 aa20.23■□□□□ 0.83
Ldb3-207ENSMUST00000227819 GnpatP98192 678 aa20.23■□□□□ 0.83
Ldb3-207ENSMUST00000227819 Fan1Q69ZT1 1020 aa20.23■□□□□ 0.83
Ldb3-207ENSMUST00000227819 MypopQ8R4U1 393 aa20.23■□□□□ 0.83
Ldb3-207ENSMUST00000227819 Bcl2l12Q9D3J3 255 aa20.23■□□□□ 0.83
Ldb3-207ENSMUST00000227819 Ifit1bl1D3Z6F0 470 aa20.22■□□□□ 0.83
Ldb3-207ENSMUST00000227819 Rgl3Q3UYI5 709 aa20.22■□□□□ 0.83
Ldb3-207ENSMUST00000227819 Lrp6O88572 1613 aa20.22■□□□□ 0.83
Ldb3-207ENSMUST00000227819 Srpk2O54781 681 aaKnown RBP20.21■□□□□ 0.83
Ldb3-207ENSMUST00000227819 Siglec1Q62230 1695 aa20.2■□□□□ 0.82
Ldb3-207ENSMUST00000227819 Lrrc7Q80TE7 1490 aa20.19■□□□□ 0.82
Ldb3-207ENSMUST00000227819 DccP70211 1447 aa20.19■□□□□ 0.82
Ldb3-207ENSMUST00000227819 Wnk3Q80XP9 1757 aa20.19■□□□□ 0.82
Ldb3-207ENSMUST00000227819 Dmrt2Q8BG36 561 aa20.18■□□□□ 0.82
Ldb3-207ENSMUST00000227819 Cep152A2AUM9 1736 aaKnown RBP20.18■□□□□ 0.82
Ldb3-207ENSMUST00000227819 Cdk5rap2Q8K389 1822 aa20.18■□□□□ 0.82
Ldb3-207ENSMUST00000227819 Usp47Q8BY87 1376 aa20.17■□□□□ 0.82
Ldb3-207ENSMUST00000227819 Puf60Q3UEB3 564 aaKnown RBP20.17■□□□□ 0.82
Ldb3-207ENSMUST00000227819 Farp2Q91VS8 1065 aa20.16■□□□□ 0.82
Ldb3-207ENSMUST00000227819 C5P06684 1680 aa20.15■□□□□ 0.82
Ldb3-207ENSMUST00000227819 Kcna6Q61923 529 aa20.15■□□□□ 0.82
Ldb3-207ENSMUST00000227819 N4bp2F8VQG7 1678 aaKnown RBP20.13■□□□□ 0.81
Ldb3-207ENSMUST00000227819 Eid3Q3V124 375 aa20.13■□□□□ 0.81
Ldb3-207ENSMUST00000227819 Als2Q920R0 1651 aa20.13■□□□□ 0.81
Ldb3-207ENSMUST00000227819 Gm20521D3Z5F7 333 aa20.12■□□□□ 0.81
Ldb3-207ENSMUST00000227819 Sox12Q04890 314 aa20.11■□□□□ 0.81
Ldb3-207ENSMUST00000227819 Smim5Q8BT42 78 aa20.11■□□□□ 0.81
Ldb3-207ENSMUST00000227819 Marf1Q8BJ34 1730 aaKnown RBP20.1■□□□□ 0.81
Ldb3-207ENSMUST00000227819 Grwd1Q810D6 446 aaKnown RBP20.1■□□□□ 0.81
Ldb3-207ENSMUST00000227819 Plekhg1F6S200 1446 aa20.09■□□□□ 0.81
Ldb3-207ENSMUST00000227819 Abca14E9Q8F8 1683 aa20.08■□□□□ 0.81
Ldb3-207ENSMUST00000227819 NinlQ6ZQ12 1394 aa20.08■□□□□ 0.8
Ldb3-207ENSMUST00000227819 Idi1P58044 227 aa20.06■□□□□ 0.8
Ldb3-207ENSMUST00000227819 Kif1aP33173 1695 aa20.06■□□□□ 0.8
Ldb3-207ENSMUST00000227819 Abcc10Q8R4P9 1501 aa20.05■□□□□ 0.8
Ldb3-207ENSMUST00000227819 Tmem2Q5FWI3 1383 aa20.05■□□□□ 0.8
Ldb3-207ENSMUST00000227819 Sipa1l1Q8C0T5 1782 aa20.05■□□□□ 0.8
Ldb3-207ENSMUST00000227819 Camta1A2A891 1682 aa20.04■□□□□ 0.8
Ldb3-207ENSMUST00000227819 Mink1Q9JM52 1308 aa20.03■□□□□ 0.8
Ldb3-207ENSMUST00000227819 Mier1Q5UAK0 511 aa20.03■□□□□ 0.8
Ldb3-207ENSMUST00000227819 Atp2b2Q9R0K7 1198 aa20.03■□□□□ 0.8
Ldb3-207ENSMUST00000227819 Zranb1Q7M760 708 aa20.02■□□□□ 0.8
Ldb3-207ENSMUST00000227819 Hspa5P20029 655 aaKnown RBP20.01■□□□□ 0.79
Ldb3-207ENSMUST00000227819 IqubQ8CDK3 788 aa20.01■□□□□ 0.79
Ldb3-207ENSMUST00000227819 NgefQ8CHT1 710 aa20.01■□□□□ 0.79
Ldb3-207ENSMUST00000227819 Tex14Q7M6U3 1450 aa20.01■□□□□ 0.79
Ldb3-207ENSMUST00000227819 Emilin2Q8K482 1074 aa20■□□□□ 0.79
Ldb3-207ENSMUST00000227819 Acsbg1Q99PU5 721 aa20■□□□□ 0.79
Ldb3-207ENSMUST00000227819 Stag3O70576 1240 aa19.99■□□□□ 0.79
Ldb3-207ENSMUST00000227819 Ddx54Q8K4L0 874 aaKnown RBP19.99■□□□□ 0.79
Ldb3-207ENSMUST00000227819 Atp7bQ64446 1462 aa19.98■□□□□ 0.79
Ldb3-207ENSMUST00000227819 Fam135bQ9DAI6 1403 aa19.98■□□□□ 0.79
Ldb3-207ENSMUST00000227819 RalgapbQ8BQZ4 1484 aa19.97■□□□□ 0.79
Ldb3-207ENSMUST00000227819 MpndQ3TV65 487 aa19.97■□□□□ 0.79
Ldb3-207ENSMUST00000227819 Usp40Q8BWR4 1235 aa19.97■□□□□ 0.79
Ldb3-207ENSMUST00000227819 Arhgef1Q61210 920 aaKnown RBP19.96■□□□□ 0.79
Ldb3-207ENSMUST00000227819 Eno4Q8C042 619 aa19.95■□□□□ 0.78
Ldb3-207ENSMUST00000227819 Neurod1Q60867 357 aa19.94■□□□□ 0.78
Ldb3-207ENSMUST00000227819 Znf316Q6PGE4 1016 aa19.94■□□□□ 0.78
Ldb3-207ENSMUST00000227819 Ap3b2Q9JME5 1082 aa19.94■□□□□ 0.78
Ldb3-207ENSMUST00000227819 Atp10bB1AWN4 1474 aa19.93■□□□□ 0.78
Ldb3-207ENSMUST00000227819 PtpruB1AUH1 1446 aa19.92■□□□□ 0.78
Ldb3-207ENSMUST00000227819 Wdr17E9Q271 1322 aa19.92■□□□□ 0.78
Ldb3-207ENSMUST00000227819 Acin1Q9JIX8 1338 aaKnown RBP19.92■□□□□ 0.78
Ldb3-207ENSMUST00000227819 Lrrc59Q922Q8 307 aaKnown RBP19.91■□□□□ 0.78
Ldb3-207ENSMUST00000227819 Cadps2Q8BYR5 1297 aa19.89■□□□□ 0.77
Ldb3-207ENSMUST00000227819 Abca15E9PWH4 1668 aa19.88■□□□□ 0.77
Ldb3-207ENSMUST00000227819 Tnrc6bQ8BKI2 1810 aaKnown RBP19.87■□□□□ 0.77
Ldb3-207ENSMUST00000227819 Rgs17Q9QZB0 210 aa19.87■□□□□ 0.77
Ldb3-207ENSMUST00000227819 Slc35g1Q8BY79 368 aa19.86■□□□□ 0.77
Ldb3-207ENSMUST00000227819 Sirt1Q923E4 737 aa19.86■□□□□ 0.77
Ldb3-207ENSMUST00000227819 Polr3aB2RXC6 1390 aa19.86■□□□□ 0.77
Ldb3-207ENSMUST00000227819 Cdk19Q8BWD8 501 aa19.86■□□□□ 0.77
Ldb3-207ENSMUST00000227819 Nphp4P59240 1425 aa19.85■□□□□ 0.77
Ldb3-207ENSMUST00000227819 Cpsf1Q9EPU4 1441 aaKnown RBP19.85■□□□□ 0.77
Ldb3-207ENSMUST00000227819 Zbtb4Q5F293 982 aa19.84■□□□□ 0.77
Ldb3-207ENSMUST00000227819 Dixdc1Q80Y83 711 aa19.84■□□□□ 0.77
Ldb3-207ENSMUST00000227819 Nrxn1Q9CS84 1514 aa19.84■□□□□ 0.77
Ldb3-207ENSMUST00000227819 Mon2Q80TL7 1715 aa19.83■□□□□ 0.77
Ldb3-207ENSMUST00000227819 NktrP30415 1453 aa19.83■□□□□ 0.77
Ldb3-207ENSMUST00000227819 Gm16486A0A1D5RMD1 1434 aa19.83■□□□□ 0.77
Ldb3-207ENSMUST00000227819 InhbeO08717 350 aa19.83■□□□□ 0.76
Ldb3-207ENSMUST00000227819 Psrc1Q9D0P7 329 aa19.83■□□□□ 0.76
Ldb3-207ENSMUST00000227819 Fyb1O35601 819 aa19.82■□□□□ 0.76
Ldb3-207ENSMUST00000227819 Gtf2e1Q9D0D5 440 aa19.82■□□□□ 0.76
Ldb3-207ENSMUST00000227819 Ildr2B5TVM2 661 aa19.81■□□□□ 0.76
Ldb3-207ENSMUST00000227819 Mug2P28666 1451 aa19.81■□□□□ 0.76
Ldb3-207ENSMUST00000227819 Sgsm1Q8BPQ7 1093 aa19.79■□□□□ 0.76
Ldb3-207ENSMUST00000227819 Tnrc6cQ3UHC0 1690 aaKnown RBP19.79■□□□□ 0.76
Ldb3-207ENSMUST00000227819 Cdhr2E9Q7P9 1308 aa19.77■□□□□ 0.76
Ldb3-207ENSMUST00000227819 CenpjQ569L8 1344 aa19.76■□□□□ 0.75
Ldb3-207ENSMUST00000227819 Txnrd1Q9JMH6 613 aa19.76■□□□□ 0.75
Ldb3-207ENSMUST00000227819 Col16a1Q8BLX7 1580 aa19.75■□□□□ 0.75
Ldb3-207ENSMUST00000227819 PaskQ8CEE6 1383 aa19.75■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 63.4 ms