RNA–Protein interactions for RNA: ENSMUST00000173243.7

Ccdc28a-203, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 590 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-203ENSMUST00000173243 IqubQ8CDK3 788 aa17.48■□□□□ 0.39
Ccdc28a-203ENSMUST00000173243 Wnk3Q80XP9 1757 aa17.46■□□□□ 0.39
Ccdc28a-203ENSMUST00000173243 Gimap5Q8BWF2 308 aa17.46■□□□□ 0.39
Ccdc28a-203ENSMUST00000173243 C5P06684 1680 aa17.45■□□□□ 0.38
Ccdc28a-203ENSMUST00000173243 Als2Q920R0 1651 aa17.45■□□□□ 0.38
Ccdc28a-203ENSMUST00000173243 Usp40Q8BWR4 1235 aa17.45■□□□□ 0.38
Ccdc28a-203ENSMUST00000173243 Abca14E9Q8F8 1683 aa17.44■□□□□ 0.38
Ccdc28a-203ENSMUST00000173243 Gm16486A0A1D5RMD1 1434 aa17.44■□□□□ 0.38
Ccdc28a-203ENSMUST00000173243 DccP70211 1447 aa17.44■□□□□ 0.38
Ccdc28a-203ENSMUST00000173243 RalgapbQ8BQZ4 1484 aa17.44■□□□□ 0.38
Ccdc28a-203ENSMUST00000173243 Gm10563F6WIE4 79 aa17.43■□□□□ 0.38
Ccdc28a-203ENSMUST00000173243 Ecm2Q5FW85 670 aa17.43■□□□□ 0.38
Ccdc28a-203ENSMUST00000173243 Pik3c2bE9QAN8 1632 aa17.43■□□□□ 0.38
Ccdc28a-203ENSMUST00000173243 KdrP35918 1367 aa17.42■□□□□ 0.38
Ccdc28a-203ENSMUST00000173243 Sipa1l2Q80TE4 1722 aa17.42■□□□□ 0.38
Ccdc28a-203ENSMUST00000173243 Stag3O70576 1240 aa17.41■□□□□ 0.38
Ccdc28a-203ENSMUST00000173243 Neurod1Q60867 357 aa17.41■□□□□ 0.38
Ccdc28a-203ENSMUST00000173243 Ttll13A4Q9F6 804 aa17.39■□□□□ 0.37
Ccdc28a-203ENSMUST00000173243 NefmP08553 848 aa17.39■□□□□ 0.37
Ccdc28a-203ENSMUST00000173243 Sirt1Q923E4 737 aa17.39■□□□□ 0.37
Ccdc28a-203ENSMUST00000173243 Atp2b2Q9R0K7 1198 aa17.39■□□□□ 0.37
Ccdc28a-203ENSMUST00000173243 Camta1A2A891 1682 aa17.39■□□□□ 0.37
Ccdc28a-203ENSMUST00000173243 Gtf2e1Q9D0D5 440 aa17.38■□□□□ 0.37
Ccdc28a-203ENSMUST00000173243 Kcna6Q61923 529 aa17.37■□□□□ 0.37
Ccdc28a-203ENSMUST00000173243 Srcin1Q9QWI6 1250 aa17.35■□□□□ 0.37
Ccdc28a-203ENSMUST00000173243 Kif1aP33173 1695 aa17.35■□□□□ 0.37
Ccdc28a-203ENSMUST00000173243 NktrP30415 1453 aa17.34■□□□□ 0.37
Ccdc28a-203ENSMUST00000173243 Tmem2Q5FWI3 1383 aa17.34■□□□□ 0.37
Ccdc28a-203ENSMUST00000173243 Tnrc6bQ8BKI2 1810 aaKnown RBP17.34■□□□□ 0.37
Ccdc28a-203ENSMUST00000173243 Zfp142G5E869 1843 aa17.33■□□□□ 0.37
Ccdc28a-203ENSMUST00000173243 CenpjQ569L8 1344 aa17.32■□□□□ 0.36
Ccdc28a-203ENSMUST00000173243 Mink1Q9JM52 1308 aa17.32■□□□□ 0.36
Ccdc28a-203ENSMUST00000173243 Rundc1Q0VDN7 615 aa17.32■□□□□ 0.36
Ccdc28a-203ENSMUST00000173243 Abcc10Q8R4P9 1501 aa17.31■□□□□ 0.36
Ccdc28a-203ENSMUST00000173243 Pola1P33609 1465 aa17.31■□□□□ 0.36
Ccdc28a-203ENSMUST00000173243 TonslQ6NZL6 1363 aa17.31■□□□□ 0.36
Ccdc28a-203ENSMUST00000173243 Farp2Q91VS8 1065 aa17.31■□□□□ 0.36
Ccdc28a-203ENSMUST00000173243 Marf1Q8BJ34 1730 aaKnown RBP17.3■□□□□ 0.36
Ccdc28a-203ENSMUST00000173243 Kif24Q6NWW5 1356 aa17.3■□□□□ 0.36
Ccdc28a-203ENSMUST00000173243 Card11Q8CIS0 1159 aa17.3■□□□□ 0.36
Ccdc28a-203ENSMUST00000173243 Slc5a4bQ91ZP4 660 aa17.3■□□□□ 0.36
Ccdc28a-203ENSMUST00000173243 N4bp2F8VQG7 1678 aaKnown RBP17.29■□□□□ 0.36
Ccdc28a-203ENSMUST00000173243 Mon2Q80TL7 1715 aa17.28■□□□□ 0.36
Ccdc28a-203ENSMUST00000173243 Qtrt2B8ZXI1 415 aa17.28■□□□□ 0.36
Ccdc28a-203ENSMUST00000173243 Idi1P58044 227 aa17.28■□□□□ 0.36
Ccdc28a-203ENSMUST00000173243 Cdk19Q8BWD8 501 aa17.27■□□□□ 0.36
Ccdc28a-203ENSMUST00000173243 Rock2P70336 1388 aa17.27■□□□□ 0.35
Ccdc28a-203ENSMUST00000173243 Ybx3Q9JKB3 361 aaKnown RBP17.26■□□□□ 0.35
Ccdc28a-203ENSMUST00000173243 Adgrl1Q80TR1 1466 aa17.24■□□□□ 0.35
Ccdc28a-203ENSMUST00000173243 GnpatP98192 678 aa17.24■□□□□ 0.35
Ccdc28a-203ENSMUST00000173243 Ap3b2Q9JME5 1082 aa17.24■□□□□ 0.35
Ccdc28a-203ENSMUST00000173243 InsrP15208 1372 aa17.24■□□□□ 0.35
Ccdc28a-203ENSMUST00000173243 Atp7bQ64446 1462 aa17.24■□□□□ 0.35
Ccdc28a-203ENSMUST00000173243 Gsto1O09131 240 aa17.23■□□□□ 0.35
Ccdc28a-203ENSMUST00000173243 Fnbp4Q6ZQ03 1031 aa17.22■□□□□ 0.35
Ccdc28a-203ENSMUST00000173243 Acin1Q9JIX8 1338 aaKnown RBP17.21■□□□□ 0.35
Ccdc28a-203ENSMUST00000173243 PtpruB1AUH1 1446 aa17.21■□□□□ 0.35
Ccdc28a-203ENSMUST00000173243 PtprvP70289 1705 aa17.21■□□□□ 0.35
Ccdc28a-203ENSMUST00000173243 GapdhsQ64467 440 aa17.21■□□□□ 0.35
Ccdc28a-203ENSMUST00000173243 Nyap1Q6PFX7 833 aa17.21■□□□□ 0.35
Ccdc28a-203ENSMUST00000173243 Nrxn1Q9CS84 1514 aa17.21■□□□□ 0.34
Ccdc28a-203ENSMUST00000173243 Wdr17E9Q271 1322 aa17.21■□□□□ 0.34
Ccdc28a-203ENSMUST00000173243 FanciQ8K368 1330 aa17.21■□□□□ 0.34
Ccdc28a-203ENSMUST00000173243 Siglec1Q62230 1695 aa17.2■□□□□ 0.34
Ccdc28a-203ENSMUST00000173243 Atp10bB1AWN4 1474 aa17.2■□□□□ 0.34
Ccdc28a-203ENSMUST00000173243 Znf526Q8BI66 675 aa17.2■□□□□ 0.34
Ccdc28a-203ENSMUST00000173243 Nhsl1Q8CAF4 1587 aa17.19■□□□□ 0.34
Ccdc28a-203ENSMUST00000173243 Fam135bQ9DAI6 1403 aa17.19■□□□□ 0.34
Ccdc28a-203ENSMUST00000173243 Sox12Q04890 314 aa17.18■□□□□ 0.34
Ccdc28a-203ENSMUST00000173243 Idi2Q8BFZ6 227 aa17.18■□□□□ 0.34
Ccdc28a-203ENSMUST00000173243 Bcl2l12Q9D3J3 255 aa17.17■□□□□ 0.34
Ccdc28a-203ENSMUST00000173243 Ddx17Q501J6 650 aaKnown RBP17.16■□□□□ 0.34
Ccdc28a-203ENSMUST00000173243 Znf335A2A5K6 1337 aa17.16■□□□□ 0.34
Ccdc28a-203ENSMUST00000173243 Slit2Q9R1B9 1521 aa17.16■□□□□ 0.34
Ccdc28a-203ENSMUST00000173243 Cntnap1O54991 1385 aa17.15■□□□□ 0.34
Ccdc28a-203ENSMUST00000173243 Cadps2Q8BYR5 1297 aa17.15■□□□□ 0.34
Ccdc28a-203ENSMUST00000173243 CatipB9EKE5 520 aa17.14■□□□□ 0.33
Ccdc28a-203ENSMUST00000173243 Cwc22Q8C5N3 908 aaKnown RBP17.14■□□□□ 0.33
Ccdc28a-203ENSMUST00000173243 Sema6bO54951 886 aa17.13■□□□□ 0.33
Ccdc28a-203ENSMUST00000173243 Cypt2Q6P924 180 aa17.13■□□□□ 0.33
Ccdc28a-203ENSMUST00000173243 NgefQ8CHT1 710 aa17.13■□□□□ 0.33
Ccdc28a-203ENSMUST00000173243 Exosc9Q9JHI7 438 aaKnown RBP17.13■□□□□ 0.33
Ccdc28a-203ENSMUST00000173243 Abca15E9PWH4 1668 aa17.13■□□□□ 0.33
Ccdc28a-203ENSMUST00000173243 Zmym3Q9JLM4 1370 aa17.13■□□□□ 0.33
Ccdc28a-203ENSMUST00000173243 Znf316Q6PGE4 1016 aa17.12■□□□□ 0.33
Ccdc28a-203ENSMUST00000173243 Map3k19E9Q3S4 1311 aa17.12■□□□□ 0.33
Ccdc28a-203ENSMUST00000173243 Fbln2P37889 1221 aa17.11■□□□□ 0.33
Ccdc28a-203ENSMUST00000173243 Zbtb4Q5F293 982 aa17.11■□□□□ 0.33
Ccdc28a-203ENSMUST00000173243 Zranb1Q7M760 708 aa17.1■□□□□ 0.33
Ccdc28a-203ENSMUST00000173243 Fyb1O35601 819 aa17.09■□□□□ 0.33
Ccdc28a-203ENSMUST00000173243 Ppargc1bQ8VHJ7 1014 aa17.09■□□□□ 0.33
Ccdc28a-203ENSMUST00000173243 Rpgrip1Q9EPQ2 1331 aa17.09■□□□□ 0.33
Ccdc28a-203ENSMUST00000173243 Tex14Q7M6U3 1450 aa17.08■□□□□ 0.32
Ccdc28a-203ENSMUST00000173243 Bcl9lQ67FY2 1494 aa17.07■□□□□ 0.32
Ccdc28a-203ENSMUST00000173243 Sbno1Q689Z5 1390 aa17.07■□□□□ 0.32
Ccdc28a-203ENSMUST00000173243 Lrrc59Q922Q8 307 aaKnown RBP17.07■□□□□ 0.32
Ccdc28a-203ENSMUST00000173243 TimelessQ9R1X4 1197 aa17.07■□□□□ 0.32
Ccdc28a-203ENSMUST00000173243 Lrp6O88572 1613 aa17.07■□□□□ 0.32
Ccdc28a-203ENSMUST00000173243 Arhgef1Q61210 920 aaKnown RBP17.06■□□□□ 0.32
Ccdc28a-203ENSMUST00000173243 Ggt6Q6PDE7 497 aa17.06■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 11.3 ms