RNA–Protein interactions for RNA: ENSMUST00000111438.1

Ddx55-202, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

TSL 2 BASIC

Gene Ddx55, Length 2,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-202ENSMUST00000111438 Nwd1A6H603 1563 aa17.04■□□□□ 0.32
Ddx55-202ENSMUST00000111438 Tubgcp6G5E8P0 1769 aa17.03■□□□□ 0.32
Ddx55-202ENSMUST00000111438 Gm16486A0A1D5RMD1 1434 aa17.02■□□□□ 0.31
Ddx55-202ENSMUST00000111438 Ltbp4Q8K4G1 1666 aa17.02■□□□□ 0.31
Ddx55-202ENSMUST00000111438 IqubQ8CDK3 788 aa17.01■□□□□ 0.31
Ddx55-202ENSMUST00000111438 Usp32F8VPZ3 1604 aa17■□□□□ 0.31
Ddx55-202ENSMUST00000111438 Stk26Q99JT2 416 aa17■□□□□ 0.31
Ddx55-202ENSMUST00000111438 Stag3O70576 1240 aa16.99■□□□□ 0.31
Ddx55-202ENSMUST00000111438 Utp14aQ640M1 767 aaKnown RBP16.99■□□□□ 0.31
Ddx55-202ENSMUST00000111438 Plekhg5Q66T02 1073 aa16.99■□□□□ 0.31
Ddx55-202ENSMUST00000111438 Zbtb4Q5F293 982 aa16.98■□□□□ 0.31
Ddx55-202ENSMUST00000111438 Kif20bQ80WE4 1774 aaKnown RBP16.97■□□□□ 0.31
Ddx55-202ENSMUST00000111438 D430041D05RikF6ZGR6 1678 aa16.95■□□□□ 0.3
Ddx55-202ENSMUST00000111438 Sbno1Q689Z5 1390 aa16.95■□□□□ 0.3
Ddx55-202ENSMUST00000111438 NktrP30415 1453 aa16.95■□□□□ 0.3
Ddx55-202ENSMUST00000111438 Rreb1Q3UH06 1700 aaKnown RBP16.94■□□□□ 0.3
Ddx55-202ENSMUST00000111438 Unc13bQ9Z1N9 1602 aa16.94■□□□□ 0.3
Ddx55-202ENSMUST00000111438 InsrP15208 1372 aa16.93■□□□□ 0.3
Ddx55-202ENSMUST00000111438 CenpjQ569L8 1344 aa16.92■□□□□ 0.3
Ddx55-202ENSMUST00000111438 Cyb5rlB1AS42 316 aa16.92■□□□□ 0.3
Ddx55-202ENSMUST00000111438 HnrnpmQ9D0E1 729 aaKnown RBP16.91■□□□□ 0.3
Ddx55-202ENSMUST00000111438 Pik3c2bE9QAN8 1632 aa16.91■□□□□ 0.3
Ddx55-202ENSMUST00000111438 Nop58Q6DFW4 536 aaKnown RBP16.89■□□□□ 0.29
Ddx55-202ENSMUST00000111438 Atp2b2Q9R0K7 1198 aa16.89■□□□□ 0.29
Ddx55-202ENSMUST00000111438 Tns3Q5SSZ5 1440 aa16.89■□□□□ 0.29
Ddx55-202ENSMUST00000111438 Mink1Q9JM52 1308 aa16.88■□□□□ 0.29
Ddx55-202ENSMUST00000111438 C5P06684 1680 aa16.88■□□□□ 0.29
Ddx55-202ENSMUST00000111438 Als2Q920R0 1651 aa16.88■□□□□ 0.29
Ddx55-202ENSMUST00000111438 Rapgef3Q8VCC8 918 aa16.88■□□□□ 0.29
Ddx55-202ENSMUST00000111438 Col14a1Q80X19 1797 aa16.88■□□□□ 0.29
Ddx55-202ENSMUST00000111438 NalcnQ8BXR5 1738 aa16.87■□□□□ 0.29
Ddx55-202ENSMUST00000111438 Col18a1P39061 1774 aa16.87■□□□□ 0.29
Ddx55-202ENSMUST00000111438 Tnrc6bQ8BKI2 1810 aaKnown RBP16.87■□□□□ 0.29
Ddx55-202ENSMUST00000111438 PrxO55103 1391 aa16.85■□□□□ 0.29
Ddx55-202ENSMUST00000111438 Gli3Q61602 1583 aa16.84■□□□□ 0.29
Ddx55-202ENSMUST00000111438 Pip4k2bQ80XI4 416 aa16.83■□□□□ 0.29
Ddx55-202ENSMUST00000111438 Mapk8ip2Q9ERE9 830 aa16.83■□□□□ 0.29
Ddx55-202ENSMUST00000111438 C3P01027 1663 aa16.83■□□□□ 0.28
Ddx55-202ENSMUST00000111438 N4bp2F8VQG7 1678 aaKnown RBP16.82■□□□□ 0.28
Ddx55-202ENSMUST00000111438 Q3UJC8 639 aa16.82■□□□□ 0.28
Ddx55-202ENSMUST00000111438 Cdk19Q8BWD8 501 aa16.82■□□□□ 0.28
Ddx55-202ENSMUST00000111438 Slc4a1apE9PX68 744 aa16.8■□□□□ 0.28
Ddx55-202ENSMUST00000111438 Gsto1O09131 240 aa16.8■□□□□ 0.28
Ddx55-202ENSMUST00000111438 Slc24a1Q91WD8 1130 aa16.8■□□□□ 0.28
Ddx55-202ENSMUST00000111438 Tmem94Q7TSH8 1360 aa16.79■□□□□ 0.28
Ddx55-202ENSMUST00000111438 Pank3Q8R2W9 370 aa16.79■□□□□ 0.28
Ddx55-202ENSMUST00000111438 Sirt1Q923E4 737 aa16.79■□□□□ 0.28
Ddx55-202ENSMUST00000111438 Tmf1B9EKI3 1091 aa16.78■□□□□ 0.28
Ddx55-202ENSMUST00000111438 Fam184bQ0KK56 942 aa16.78■□□□□ 0.28
Ddx55-202ENSMUST00000111438 Nrxn1Q9CS84 1514 aa16.78■□□□□ 0.28
Ddx55-202ENSMUST00000111438 Adgrl1Q80TR1 1466 aa16.78■□□□□ 0.28
Ddx55-202ENSMUST00000111438 Mon2Q80TL7 1715 aa16.77■□□□□ 0.28
Ddx55-202ENSMUST00000111438 Abcc10Q8R4P9 1501 aa16.76■□□□□ 0.27
Ddx55-202ENSMUST00000111438 FanciQ8K368 1330 aa16.76■□□□□ 0.27
Ddx55-202ENSMUST00000111438 Zranb1Q7M760 708 aa16.76■□□□□ 0.27
Ddx55-202ENSMUST00000111438 Sipa1l2Q80TE4 1722 aa16.76■□□□□ 0.27
Ddx55-202ENSMUST00000111438 Exosc9Q9JHI7 438 aaKnown RBP16.75■□□□□ 0.27
Ddx55-202ENSMUST00000111438 PtpruB1AUH1 1446 aa16.75■□□□□ 0.27
Ddx55-202ENSMUST00000111438 Fam71e1A1L3C1 212 aa16.74■□□□□ 0.27
Ddx55-202ENSMUST00000111438 Inpp5dQ9ES52 1191 aa16.74■□□□□ 0.27
Ddx55-202ENSMUST00000111438 Iqsec2Q5DU25 1478 aa16.74■□□□□ 0.27
Ddx55-202ENSMUST00000111438 Smg6P61406 1418 aaKnown RBP16.73■□□□□ 0.27
Ddx55-202ENSMUST00000111438 Wnk3Q80XP9 1757 aa16.73■□□□□ 0.27
Ddx55-202ENSMUST00000111438 Gm10563F6WIE4 79 aa16.73■□□□□ 0.27
Ddx55-202ENSMUST00000111438 Zscan10Q3URR7 782 aa16.73■□□□□ 0.27
Ddx55-202ENSMUST00000111438 Cnga1P29974 684 aa16.72■□□□□ 0.27
Ddx55-202ENSMUST00000111438 Map3k19E9Q3S4 1311 aa16.71■□□□□ 0.27
Ddx55-202ENSMUST00000111438 PrkcshO08795 521 aa16.71■□□□□ 0.27
Ddx55-202ENSMUST00000111438 Slain2Q8CI08 581 aa16.71■□□□□ 0.27
Ddx55-202ENSMUST00000111438 Gprasp1Q5U4C1 1347 aa16.69■□□□□ 0.26
Ddx55-202ENSMUST00000111438 Idi2Q8BFZ6 227 aa16.69■□□□□ 0.26
Ddx55-202ENSMUST00000111438 Camta1A2A891 1682 aa16.69■□□□□ 0.26
Ddx55-202ENSMUST00000111438 Amigo3Q8C2S7 508 aa16.68■□□□□ 0.26
Ddx55-202ENSMUST00000111438 Idi1P58044 227 aa16.67■□□□□ 0.26
Ddx55-202ENSMUST00000111438 KdrP35918 1367 aa16.66■□□□□ 0.26
Ddx55-202ENSMUST00000111438 Kif1aP33173 1695 aa16.64■□□□□ 0.25
Ddx55-202ENSMUST00000111438 NinlQ6ZQ12 1394 aa16.64■□□□□ 0.25
Ddx55-202ENSMUST00000111438 CatipB9EKE5 520 aa16.64■□□□□ 0.25
Ddx55-202ENSMUST00000111438 Evi5lH3BKQ3 813 aa16.64■□□□□ 0.25
Ddx55-202ENSMUST00000111438 Znf316Q6PGE4 1016 aa16.64■□□□□ 0.25
Ddx55-202ENSMUST00000111438 Tmem2Q5FWI3 1383 aa16.63■□□□□ 0.25
Ddx55-202ENSMUST00000111438 Znf335A2A5K6 1337 aa16.62■□□□□ 0.25
Ddx55-202ENSMUST00000111438 Chd4Q6PDQ2 1915 aaKnown RBP16.61■□□□□ 0.25
Ddx55-202ENSMUST00000111438 Dcaf11Q91VU6 549 aa16.61■□□□□ 0.25
Ddx55-202ENSMUST00000111438 Pik3c2aQ61194 1686 aa16.6■□□□□ 0.25
Ddx55-202ENSMUST00000111438 Mdc1Q5PSV9 1707 aa16.6■□□□□ 0.25
Ddx55-202ENSMUST00000111438 Kif7B7ZNG0 1348 aa16.6■□□□□ 0.25
Ddx55-202ENSMUST00000111438 Brinp3Q499E0 766 aa16.58■□□□□ 0.25
Ddx55-202ENSMUST00000111438 SafbD3YXK2 937 aaKnown RBP16.57■□□□□ 0.24
Ddx55-202ENSMUST00000111438 Ap3b2Q9JME5 1082 aa16.57■□□□□ 0.24
Ddx55-202ENSMUST00000111438 Sox12Q04890 314 aa16.57■□□□□ 0.24
Ddx55-202ENSMUST00000111438 Col16a1Q8BLX7 1580 aa16.57■□□□□ 0.24
Ddx55-202ENSMUST00000111438 Atf3Q60765 181 aa16.56■□□□□ 0.24
Ddx55-202ENSMUST00000111438 Kcna6Q61923 529 aa16.55■□□□□ 0.24
Ddx55-202ENSMUST00000111438 Kif16bB1AVY7 1312 aa16.55■□□□□ 0.24
Ddx55-202ENSMUST00000111438 Tex14Q7M6U3 1450 aa16.55■□□□□ 0.24
Ddx55-202ENSMUST00000111438 NgefQ8CHT1 710 aa16.55■□□□□ 0.24
Ddx55-202ENSMUST00000111438 DccP70211 1447 aa16.54■□□□□ 0.24
Ddx55-202ENSMUST00000111438 Exoc6Q8R313 802 aa16.54■□□□□ 0.24
Ddx55-202ENSMUST00000111438 Ubr1O70481 1757 aa16.54■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms