RNA–Protein interactions for RNA: ENSMUST00000111438.1

Ddx55-202, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

TSL 2 BASIC

Gene Ddx55, Length 2,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-202ENSMUST00000111438 Gm35339A0A140LHH9 1649 aa26.7■■□□□ 1.86
Ddx55-202ENSMUST00000111438 NischQ80TM9 1593 aa26.45■■□□□ 1.82
Ddx55-202ENSMUST00000111438 Abcc9P70170 1546 aa25.7■■□□□ 1.7
Ddx55-202ENSMUST00000111438 Abcc8B2RUS7 1588 aa25.45■■□□□ 1.66
Ddx55-202ENSMUST00000111438 ScribQ80U72 1612 aa24.27■■□□□ 1.48
Ddx55-202ENSMUST00000111438 Dcaf1Q80TR8 1506 aa23.61■■□□□ 1.37
Ddx55-202ENSMUST00000111438 Kdm5dQ62240 1548 aa23.55■■□□□ 1.36
Ddx55-202ENSMUST00000111438 NacadQ5SWP3 1504 aa23.51■■□□□ 1.35
Ddx55-202ENSMUST00000111438 Rhox8Q6VSS7 320 aa23.16■■□□□ 1.3
Ddx55-202ENSMUST00000111438 Rb1cc1Q9ESK9 1588 aa23.1■■□□□ 1.29
Ddx55-202ENSMUST00000111438 Sycp2Q9CUU3 1500 aa23.04■■□□□ 1.28
Ddx55-202ENSMUST00000111438 Ccdc180J3QNE4 1664 aa23■■□□□ 1.27
Ddx55-202ENSMUST00000111438 Baz1aO88379 1555 aa22.83■■□□□ 1.24
Ddx55-202ENSMUST00000111438 Crybg2B7ZCC2 1516 aa22.68■■□□□ 1.22
Ddx55-202ENSMUST00000111438 BicraF8VPZ9 1578 aa22.67■■□□□ 1.22
Ddx55-202ENSMUST00000111438 Rtl1Q7M732 1744 aa22.39■■□□□ 1.17
Ddx55-202ENSMUST00000111438 Zcchc6Q5BLK4 1491 aaKnown RBP22.3■■□□□ 1.16
Ddx55-202ENSMUST00000111438 Smarca2Q6DIC0 1577 aa22.24■■□□□ 1.15
Ddx55-202ENSMUST00000111438 Cecr2E9Q2Z1 1453 aa21.89■■□□□ 1.09
Ddx55-202ENSMUST00000111438 Pds5bQ4VA53 1446 aaKnown RBP21.84■■□□□ 1.09
Ddx55-202ENSMUST00000111438 Smarca4Q3TKT4 1613 aaKnown RBP21.82■■□□□ 1.08
Ddx55-202ENSMUST00000111438 Atad2bE9Q166 1460 aaKnown RBP21.76■■□□□ 1.07
Ddx55-202ENSMUST00000111438 Iqgap2Q3UQ44 1575 aa21.62■■□□□ 1.05
Ddx55-202ENSMUST00000111438 Ccdc136Q3TVA9 1136 aa21.6■■□□□ 1.05
Ddx55-202ENSMUST00000111438 Thoc2B1AZI6 1594 aaKnown RBP21.55■■□□□ 1.04
Ddx55-202ENSMUST00000111438 Brd4Q9ESU6 1400 aaKnown RBP21.55■■□□□ 1.04
Ddx55-202ENSMUST00000111438 Synj1Q8CHC4 1574 aa21.53■■□□□ 1.04
Ddx55-202ENSMUST00000111438 Cttnbp2B9EJA2 1648 aa21.51■■□□□ 1.03
Ddx55-202ENSMUST00000111438 CftrP26361 1476 aa21.5■■□□□ 1.03
Ddx55-202ENSMUST00000111438 Ercc6F8VPZ5 1481 aa21.38■■□□□ 1.01
Ddx55-202ENSMUST00000111438 Wdr62Q3U3T8 1523 aa21.37■■□□□ 1.01
Ddx55-202ENSMUST00000111438 Trim41Q5NCC3 630 aa21.34■■□□□ 1.01
Ddx55-202ENSMUST00000111438 Frmpd1A2AKB4 1549 aa21.32■■□□□ 1
Ddx55-202ENSMUST00000111438 Cc2d2aQ8CFW7 1633 aa21.19■□□□□ 0.98
Ddx55-202ENSMUST00000111438 Unc13aQ4KUS2 1712 aa21.16■□□□□ 0.98
Ddx55-202ENSMUST00000111438 Fam135aQ6NS59 1506 aa21.16■□□□□ 0.98
Ddx55-202ENSMUST00000111438 Dnajc5bQ9CQ94 199 aa21.14■□□□□ 0.97
Ddx55-202ENSMUST00000111438 Phldb1Q6PDH0 1371 aaKnown RBP21.03■□□□□ 0.96
Ddx55-202ENSMUST00000111438 Top2bQ64511 1612 aa21.01■□□□□ 0.95
Ddx55-202ENSMUST00000111438 Golga3P55937 1487 aa21■□□□□ 0.95
Ddx55-202ENSMUST00000111438 Esf1Q3V1V3 845 aaKnown RBP20.98■□□□□ 0.95
Ddx55-202ENSMUST00000111438 Baz1bQ9Z277 1479 aa20.92■□□□□ 0.94
Ddx55-202ENSMUST00000111438 Lamc3Q9R0B6 1581 aa20.79■□□□□ 0.92
Ddx55-202ENSMUST00000111438 Cngb1E1AZ71 1325 aa20.76■□□□□ 0.91
Ddx55-202ENSMUST00000111438 TnnQ80Z71 1560 aa20.75■□□□□ 0.91
Ddx55-202ENSMUST00000111438 Rsf1E9PWW9 1441 aaKnown RBP20.74■□□□□ 0.91
Ddx55-202ENSMUST00000111438 Ubl4bQ9CQ84 188 aa20.73■□□□□ 0.91
Ddx55-202ENSMUST00000111438 Fmn1Q05860 1466 aa20.67■□□□□ 0.9
Ddx55-202ENSMUST00000111438 Kif15Q6P9L6 1387 aa20.65■□□□□ 0.9
Ddx55-202ENSMUST00000111438 Mrc2Q64449 1479 aa20.6■□□□□ 0.89
Ddx55-202ENSMUST00000111438 HrcG5E8J6 738 aa20.58■□□□□ 0.88
Ddx55-202ENSMUST00000111438 Ccdc88bQ4QRL3 1481 aa20.57■□□□□ 0.88
Ddx55-202ENSMUST00000111438 Cux2P70298 1426 aa20.53■□□□□ 0.88
Ddx55-202ENSMUST00000111438 Camsap1A2AHC3 1581 aa20.46■□□□□ 0.87
Ddx55-202ENSMUST00000111438 Chic1Q8CBW7 227 aa20.42■□□□□ 0.86
Ddx55-202ENSMUST00000111438 Top2aQ01320 1528 aaKnown RBP20.42■□□□□ 0.86
Ddx55-202ENSMUST00000111438 Ccdc18Q640L5 1455 aa20.39■□□□□ 0.85
Ddx55-202ENSMUST00000111438 Cep164Q5DU05 1446 aa20.38■□□□□ 0.85
Ddx55-202ENSMUST00000111438 Kif21aQ9QXL2 1672 aa20.36■□□□□ 0.85
Ddx55-202ENSMUST00000111438 Npm1Q61937 292 aaKnown RBP20.27■□□□□ 0.84
Ddx55-202ENSMUST00000111438 Grin2bQ01097 1482 aa20.21■□□□□ 0.83
Ddx55-202ENSMUST00000111438 LrpprcQ6PB66 1392 aaKnown RBP20.21■□□□□ 0.83
Ddx55-202ENSMUST00000111438 Il27Q8K3I6 234 aa20.2■□□□□ 0.82
Ddx55-202ENSMUST00000111438 Lrriq1Q0P5X1 1673 aa20.17■□□□□ 0.82
Ddx55-202ENSMUST00000111438 PogzQ8BZH4 1409 aaKnown RBP20.16■□□□□ 0.82
Ddx55-202ENSMUST00000111438 Dhx29Q6PGC1 1365 aaKnown RBP20.14■□□□□ 0.82
Ddx55-202ENSMUST00000111438 NrkQ9R0G8 1455 aa20.13■□□□□ 0.81
Ddx55-202ENSMUST00000111438 Crocc2F6XLV1 1638 aa20.12■□□□□ 0.81
Ddx55-202ENSMUST00000111438 Duox2A2AQ99 1517 aa20.07■□□□□ 0.8
Ddx55-202ENSMUST00000111438 Shroom4Q1W617 1475 aa20.05■□□□□ 0.8
Ddx55-202ENSMUST00000111438 Efcab5A0JP43 1406 aa20.03■□□□□ 0.8
Ddx55-202ENSMUST00000111438 PtprkP35822 1457 aa20.02■□□□□ 0.8
Ddx55-202ENSMUST00000111438 Urb2E9Q7L1 1524 aaKnown RBP20.02■□□□□ 0.8
Ddx55-202ENSMUST00000111438 Plb1Q3TTY0 1478 aa19.99■□□□□ 0.79
Ddx55-202ENSMUST00000111438 Rapgef2Q8CHG7 1496 aa19.99■□□□□ 0.79
Ddx55-202ENSMUST00000111438 Samd9lQ69Z37 1561 aa19.98■□□□□ 0.79
Ddx55-202ENSMUST00000111438 Gab3Q8BSM5 595 aa19.92■□□□□ 0.78
Ddx55-202ENSMUST00000111438 Eif4g1Q6NZJ6 1600 aaKnown RBP19.92■□□□□ 0.78
Ddx55-202ENSMUST00000111438 Eif4g3Q80XI3 1579 aaKnown RBP19.89■□□□□ 0.78
Ddx55-202ENSMUST00000111438 Ift140E9PY46 1464 aa19.87■□□□□ 0.77
Ddx55-202ENSMUST00000111438 Setd1bQ8CFT2 1985 aa19.83■□□□□ 0.76
Ddx55-202ENSMUST00000111438 Pbrm1Q8BSQ9 1634 aaKnown RBP19.82■□□□□ 0.76
Ddx55-202ENSMUST00000111438 Disp1Q3TDN0 1521 aa19.81■□□□□ 0.76
Ddx55-202ENSMUST00000111438 Cep162Q6ZQ06 1403 aa19.81■□□□□ 0.76
Ddx55-202ENSMUST00000111438 Mroh2bQ7M6Y6 1581 aa19.81■□□□□ 0.76
Ddx55-202ENSMUST00000111438 SynmQ70IV5 1561 aa19.81■□□□□ 0.76
Ddx55-202ENSMUST00000111438 Arhgap35Q91YM2 1499 aa19.79■□□□□ 0.76
Ddx55-202ENSMUST00000111438 Map3k1P53349 1493 aa19.78■□□□□ 0.76
Ddx55-202ENSMUST00000111438 Gpatch8A2A6A1 1505 aa19.77■□□□□ 0.76
Ddx55-202ENSMUST00000111438 Npm2Q80W85 207 aa19.77■□□□□ 0.76
Ddx55-202ENSMUST00000111438 Rad54l2Q99NG0 1466 aa19.76■□□□□ 0.75
Ddx55-202ENSMUST00000111438 Magi3Q9EQJ9 1476 aa19.75■□□□□ 0.75
Ddx55-202ENSMUST00000111438 Nup160Q9Z0W3 1402 aaKnown RBP19.73■□□□□ 0.75
Ddx55-202ENSMUST00000111438 Rusc2Q80U22 1514 aa19.72■□□□□ 0.75
Ddx55-202ENSMUST00000111438 Grin2aP35436 1464 aa19.71■□□□□ 0.75
Ddx55-202ENSMUST00000111438 AqrQ8CFQ3 1481 aaKnown RBP19.7■□□□□ 0.74
Ddx55-202ENSMUST00000111438 Pla2r1Q62028 1487 aa19.69■□□□□ 0.74
Ddx55-202ENSMUST00000111438 Cc2d2bA0A286YDU8 1405 aa19.63■□□□□ 0.73
Ddx55-202ENSMUST00000111438 Carmil1Q6EDY6 1374 aa19.61■□□□□ 0.73
Ddx55-202ENSMUST00000111438 Zeb1Q64318 1117 aa19.6■□□□□ 0.73
Retrieved 100 of 22,080 RNA–protein pairs in 156.3 ms