RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W YBR027CP38220 110 aa0.93□□□□□ -2.26
SHS1YDL225W DER1P38307 211 aa0.93□□□□□ -2.26
SHS1YDL225W NSL1Q12143 216 aa0.93□□□□□ -2.26
SHS1YDL225W PBI2P0CT04 75 aaKnown RBP0.92□□□□□ -2.26
SHS1YDL225W HSP150P32478 413 aa0.92□□□□□ -2.26
SHS1YDL225W APS3P47064 194 aa0.92□□□□□ -2.26
SHS1YDL225W FMP49A0A023PZB3 126 aa0.91□□□□□ -2.26
SHS1YDL225W BUB2P26448 306 aaPredicted RBP0.91□□□□□ -2.26
SHS1YDL225W VAM10Q08474 114 aa0.91□□□□□ -2.26
SHS1YDL225W EFG1Q3E705 233 aaKnown RBP0.91□□□□□ -2.26
SHS1YDL225W YCR001WP25347 104 aa0.91□□□□□ -2.26
SHS1YDL225W RCF2P53721 224 aa0.91□□□□□ -2.26
SHS1YDL225W NMA1Q06178 401 aaKnown RBP0.91□□□□□ -2.26
SHS1YDL225W TCB3Q03640 1545 aaKnown RBP0.9□□□□□ -2.26
SHS1YDL225W YER181CP40097 107 aa0.9□□□□□ -2.27
SHS1YDL225W FMN1Q03778 218 aa0.9□□□□□ -2.27
SHS1YDL225W UBR1P19812 1950 aa0.89□□□□□ -2.27
SHS1YDL225W XRN1P22147 1528 aaKnown RBP0.89□□□□□ -2.27
SHS1YDL225W SRP21P32342 167 aa0.89□□□□□ -2.27
SHS1YDL225W ECM31P38122 312 aa0.89□□□□□ -2.27
SHS1YDL225W YJL218WP40892 196 aaKnown RBP0.89□□□□□ -2.27
SHS1YDL225W TMA23Q03525 211 aa0.89□□□□□ -2.27
SHS1YDL225W YPD1Q07688 167 aa0.89□□□□□ -2.27
SHS1YDL225W RFU1Q08003 200 aa0.89□□□□□ -2.27
SHS1YDL225W MMS22Q06164 1454 aa0.89□□□□□ -2.27
SHS1YDL225W YOL013W-AP0C272 63 aaPredicted RBP0.88□□□□□ -2.27
SHS1YDL225W YGL041W-AP0C5N3 154 aa0.88□□□□□ -2.27
SHS1YDL225W IPT1P38954 527 aa0.88□□□□□ -2.27
SHS1YDL225W IRC19Q07843 230 aa0.88□□□□□ -2.27
SHS1YDL225W SPT6P23615 1451 aaKnown RBP0.88□□□□□ -2.27
SHS1YDL225W TY1B-DR4Q07793 1604 aa0.88□□□□□ -2.27
SHS1YDL225W FIG1P38224 298 aa0.88□□□□□ -2.27
SHS1YDL225W RRT7Q07829 113 aa0.88□□□□□ -2.27
SHS1YDL225W HSL1P34244 1518 aa0.87□□□□□ -2.27
SHS1YDL225W UFD4P33202 1483 aa0.87□□□□□ -2.27
SHS1YDL225W QCR6P00127 147 aa0.87□□□□□ -2.27
SHS1YDL225W PHO13P19881 312 aa0.87□□□□□ -2.27
SHS1YDL225W ARC19P33204 171 aaKnown RBP0.87□□□□□ -2.27
SHS1YDL225W MRPL24P36525 258 aaPredicted RBP0.87□□□□□ -2.27
SHS1YDL225W ATG8P38182 117 aaRIP-Chip data0.87□□□□□ -2.27not detected
SHS1YDL225W HIR3P47171 1648 aa0.87□□□□□ -2.27
SHS1YDL225W NUP170P38181 1502 aa0.87□□□□□ -2.27
SHS1YDL225W ECM5Q03214 1411 aa0.86□□□□□ -2.27
SHS1YDL225W TRM732Q03496 1420 aa0.86□□□□□ -2.27
SHS1YDL225W HYP2P23301 157 aaKnown RBP0.86□□□□□ -2.27
SHS1YDL225W EFM5P53200 248 aaKnown RBP0.86□□□□□ -2.27
SHS1YDL225W ATP19P81451 68 aa0.86□□□□□ -2.27
SHS1YDL225W POL1P13382 1468 aa0.86□□□□□ -2.27
SHS1YDL225W SIN3P22579 1536 aa0.85□□□□□ -2.27
SHS1YDL225W STU1P38198 1513 aa0.85□□□□□ -2.27
SHS1YDL225W SMD2Q06217 110 aaKnown RBP0.85□□□□□ -2.27
SHS1YDL225W PET20Q99373 253 aa0.85□□□□□ -2.27
SHS1YDL225W SPP41P38904 1435 aa0.85□□□□□ -2.27
SHS1YDL225W REV3P14284 1504 aa0.85□□□□□ -2.27
SHS1YDL225W DDR48P18899 430 aaKnown RBP0.84□□□□□ -2.27
SHS1YDL225W YNL122CP53921 115 aaPredicted RBP0.84□□□□□ -2.27
SHS1YDL225W GPI11Q06636 219 aa0.84□□□□□ -2.27
SHS1YDL225W SSK2P53599 1579 aa0.84□□□□□ -2.27
SHS1YDL225W SCC2Q04002 1493 aa0.84□□□□□ -2.27
SHS1YDL225W YPK9Q12697 1472 aa0.84□□□□□ -2.27
SHS1YDL225W DNA2P38859 1522 aa0.84□□□□□ -2.27
SHS1YDL225W BUD4P47136 1447 aa0.84□□□□□ -2.28
SHS1YDL225W YPR153WQ06537 140 aa0.84□□□□□ -2.28
SHS1YDL225W SCS22Q6Q595 175 aa0.84□□□□□ -2.28
SHS1YDL225W MON2P48563 1636 aaPredicted RBP0.84□□□□□ -2.28
SHS1YDL225W SWR1Q05471 1514 aa0.83□□□□□ -2.28
SHS1YDL225W THO2P53552 1597 aaKnown RBP0.83□□□□□ -2.28
SHS1YDL225W TOP2P06786 1428 aaKnown RBP0.83□□□□□ -2.28
SHS1YDL225W SMC4Q12267 1418 aa0.83□□□□□ -2.28
SHS1YDL225W GPI2P46961 280 aa0.83□□□□□ -2.28
SHS1YDL225W SED1Q01589 338 aa0.83□□□□□ -2.28
SHS1YDL225W RPO31P04051 1460 aa0.83□□□□□ -2.28
SHS1YDL225W MYO4P32492 1471 aa0.83□□□□□ -2.28
SHS1YDL225W YOR1P53049 1477 aa0.83□□□□□ -2.28
SHS1YDL225W BPT1P14772 1559 aa0.83□□□□□ -2.28
SHS1YDL225W ESP1Q03018 1630 aa0.82□□□□□ -2.28
SHS1YDL225W HHY1P39982 102 aa0.82□□□□□ -2.28
SHS1YDL225W EST3Q03096 181 aa0.82□□□□□ -2.28
SHS1YDL225W RIB3Q99258 208 aa0.82□□□□□ -2.28
SHS1YDL225W SNQ2P32568 1501 aaKnown RBP0.82□□□□□ -2.28
SHS1YDL225W MYO2P19524 1574 aaKnown RBP0.82□□□□□ -2.28
SHS1YDL225W PEP1P32319 1579 aa0.82□□□□□ -2.28
SHS1YDL225W TSC11P40061 1430 aa0.82□□□□□ -2.28
SHS1YDL225W GEA1P47102 1408 aaPredicted RBP0.82□□□□□ -2.28
SHS1YDL225W SNT2P53127 1403 aa0.82□□□□□ -2.28
SHS1YDL225W YLR419WQ06698 1435 aaKnown RBP0.82□□□□□ -2.28
SHS1YDL225W HSP12P22943 109 aaKnown RBP0.81□□□□□ -2.28
SHS1YDL225W POP7P38291 140 aa0.81□□□□□ -2.28
SHS1YDL225W ATG2P53855 1592 aa0.81□□□□□ -2.28
SHS1YDL225W SRB8P25648 1427 aa0.81□□□□□ -2.28
SHS1YDL225W YCF1P39109 1515 aaKnown RBP0.81□□□□□ -2.28
SHS1YDL225W TY3B-GQ99315 1547 aa0.81□□□□□ -2.28
SHS1YDL225W RPL33AP05744 107 aaKnown RBP0.81□□□□□ -2.28
SHS1YDL225W NHP6AP11632 93 aaKnown RBP0.81□□□□□ -2.28
SHS1YDL225W YAP3P38749 330 aa0.81□□□□□ -2.28
SHS1YDL225W GIM4P40005 111 aaKnown RBP0.81□□□□□ -2.28
SHS1YDL225W SEN15Q04675 128 aa0.81□□□□□ -2.28
SHS1YDL225W YHR213W-BQ8TGK1 99 aa0.81□□□□□ -2.28
SHS1YDL225W ROM2P51862 1356 aaKnown RBP0.8□□□□□ -2.28
SHS1YDL225W VPS15P22219 1454 aa0.8□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms