Protein–RNA interactions for Protein: P18899

DDR48, Stress protein DDR48, yeastyeast

Known RBP Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDR48P18899 YML009W-BYML009W-B 477 nt13.1□□□□□ -0.31
DDR48P18899 NSR1YGR159C 1245 nt13.07□□□□□ -0.32
DDR48P18899 NOP1YDL014W 984 nt12.84□□□□□ -0.35
DDR48P18899 YKL036CYKL036C 393 nt11.9□□□□□ -0.5
DDR48P18899 MDJ1YFL016C 1536 nt11.44□□□□□ -0.58
DDR48P18899 Q0297Q0297 156 nt11.31□□□□□ -0.6
DDR48P18899 SRX1YKL086W 384 nt11.24□□□□□ -0.61
DDR48P18899 YJL027CYJL027C 417 nt11.08□□□□□ -0.64
DDR48P18899 SCS3YGL126W 1143 nt10.86□□□□□ -0.67
DDR48P18899 YCR051WYCR051W 669 nt10.57□□□□□ -0.72
DDR48P18899 YOL085CYOL085C 342 nt10.31□□□□□ -0.76
DDR48P18899 DBP2YNL112W 1641 nt10.22□□□□□ -0.77
DDR48P18899 TRN1tP(UGG)A 72 nt10.12□□□□□ -0.79
DDR48P18899 SUF9tP(UGG)F 72 nt10.12□□□□□ -0.79
DDR48P18899 SUF8tP(UGG)H 72 nt10.12□□□□□ -0.79
DDR48P18899 tP(UGG)LtP(UGG)L 72 nt10.12□□□□□ -0.79
DDR48P18899 SUF7tP(UGG)M 72 nt10.12□□□□□ -0.79
DDR48P18899 tP(UGG)N1tP(UGG)N1 72 nt10.12□□□□□ -0.79
DDR48P18899 tP(UGG)N2tP(UGG)N2 72 nt10.12□□□□□ -0.79
DDR48P18899 tP(UGG)O1tP(UGG)O1 72 nt10.12□□□□□ -0.79
DDR48P18899 SUF11tP(UGG)O2 72 nt10.12□□□□□ -0.79
DDR48P18899 RPP1BYDL130W 321 nt10.11□□□□□ -0.79
DDR48P18899 PKP1YIL042C 1185 nt10.05□□□□□ -0.8
DDR48P18899 SSA3YBL075C 1950 nt9.94□□□□□ -0.82
DDR48P18899 CCC1YLR220W 969 nt9.89□□□□□ -0.83
DDR48P18899 YBR190WYBR190W 312 nt9.82□□□□□ -0.84
DDR48P18899 SCJ1YMR214W 1134 nt9.81□□□□□ -0.84
DDR48P18899 ATS1YAL020C 1002 nt9.74□□□□□ -0.85
DDR48P18899 PET122YER153C 765 nt9.61□□□□□ -0.87
DDR48P18899 RVS167YDR388W 1449 nt9.59□□□□□ -0.87
DDR48P18899 tP(UGG)O3tP(UGG)O3 72 nt9.57□□□□□ -0.88
DDR48P18899 SCR1SCR1 522 nt9.54□□□□□ -0.88
DDR48P18899 RTC3YHR087W 336 nt9.49□□□□□ -0.89
DDR48P18899 RRN5YLR141W 1092 nt9.34□□□□□ -0.91
DDR48P18899 YDJ1YNL064C 1230 nt9.32□□□□□ -0.92
DDR48P18899 SHR5YOL110W 714 nt9.31□□□□□ -0.92
DDR48P18899 YER088W-BYER088W-B 147 nt9.18□□□□□ -0.94
DDR48P18899 RSB1YOR049C 1065 nt9.14□□□□□ -0.95
DDR48P18899 SSA1YAL005C 1929 nt9.11□□□□□ -0.95
DDR48P18899 PST2YDR032C 597 nt9.04□□□□□ -0.96
DDR48P18899 GAR1YHR089C 618 nt8.98□□□□□ -0.97
DDR48P18899 FPS1YLL043W 2010 nt8.96□□□□□ -0.98
DDR48P18899 URN1YPR152C 1398 nt8.96□□□□□ -0.98
DDR48P18899 DEP1YAL013W 1218 nt8.9□□□□□ -0.98
DDR48P18899 RPN10YHR200W 807 nt8.88□□□□□ -0.99
DDR48P18899 YNL208WYNL208W 600 nt8.88□□□□□ -0.99
DDR48P18899 OPI9YLR338W 858 nt8.87□□□□□ -0.99
DDR48P18899 PUT4YOR348C 1884 nt8.85□□□□□ -0.99
DDR48P18899 NVJ2YPR091C 2313 nt8.82□□□□□ -1
DDR48P18899 SAH1YER043C 1350 nt8.73□□□□□ -1.01
DDR48P18899 TIR1YER011W 765 nt8.72□□□□□ -1.01
DDR48P18899 ARE1YCR048W 1833 nt8.7□□□□□ -1.02
DDR48P18899 YKL097CYKL097C 411 nt8.67□□□□□ -1.02
DDR48P18899 PAC11YDR488C 1602 nt8.65□□□□□ -1.03
DDR48P18899 SHU1YHL006C 453 nt8.61□□□□□ -1.03
DDR48P18899 PUN1YLR414C 792 nt8.61□□□□□ -1.03
DDR48P18899 Q0182Q0182 405 nt8.58□□□□□ -1.04
DDR48P18899 YJR018WYJR018W 363 nt8.56□□□□□ -1.04
DDR48P18899 YHR049C-AYHR049C-A 297 nt8.55□□□□□ -1.04
DDR48P18899 POA1YBR022W 534 nt8.51□□□□□ -1.05
DDR48P18899 YJR120WYJR120W 351 nt8.5□□□□□ -1.05
DDR48P18899 SRB2YHR041C 633 nt8.46□□□□□ -1.06
DDR48P18899 YJL225CYJL225C 5277 nt8.44□□□□□ -1.06
DDR48P18899 PTC2YER089C 1395 nt8.43□□□□□ -1.06
DDR48P18899 RDN37-1RDN37-1 5354 nt8.42□□□□□ -1.06
DDR48P18899 RDN37-2RDN37-2 5354 nt8.42□□□□□ -1.06
DDR48P18899 RPP2BYDR382W 333 nt8.4□□□□□ -1.06
DDR48P18899 YAL037C-BYAL037C-B 975 nt8.38□□□□□ -1.07
DDR48P18899 YGR021WYGR021W 873 nt8.36□□□□□ -1.07
DDR48P18899 NAB2YGL122C 1578 nt8.35□□□□□ -1.07
DDR48P18899 BSC6YOL137W 1494 nt8.34□□□□□ -1.07
DDR48P18899 HOM6YJR139C 1080 nt8.33□□□□□ -1.08
DDR48P18899 YOR139CYOR139C 393 nt8.33□□□□□ -1.08
DDR48P18899 WWM1YFL010C 636 nt8.32□□□□□ -1.08
DDR48P18899 BUD23YCR047C 828 nt8.3□□□□□ -1.08
DDR48P18899 INM2YDR287W 879 nt8.29□□□□□ -1.08
DDR48P18899 BDH2YAL061W 1254 nt8.28□□□□□ -1.08
DDR48P18899 FIS1YIL065C 468 nt8.27□□□□□ -1.09
DDR48P18899 DAL1YIR027C 1383 nt8.26□□□□□ -1.09
DDR48P18899 YFL021C-AYFL021C-A 855 nt8.26□□□□□ -1.09
DDR48P18899 MNP1YGL068W 585 nt8.23□□□□□ -1.09
DDR48P18899 LSM3YLR438C-A 270 nt8.23□□□□□ -1.09
DDR48P18899 YOL037CYOL037C 354 nt8.21□□□□□ -1.1
DDR48P18899 NPL3YDR432W 1245 nt8.2□□□□□ -1.1
DDR48P18899 RKM5YLR137W 1104 nt8.2□□□□□ -1.1
DDR48P18899 YBL100CYBL100C 315 nt8.18□□□□□ -1.1
DDR48P18899 PHO4YFR034C 939 nt8.17□□□□□ -1.1
DDR48P18899 FPR4YLR449W 1179 nt8.12□□□□□ -1.11
DDR48P18899 FUN26YAL022C 1554 nt8.09□□□□□ -1.11
DDR48P18899 RPM1RPM1 483 nt8.08□□□□□ -1.12
DDR48P18899 TRM9YML014W 840 nt8.07□□□□□ -1.12
DDR48P18899 UME6YDR207C 2511 nt8.05□□□□□ -1.12
DDR48P18899 CCT6YDR188W 1641 nt8.05□□□□□ -1.12
DDR48P18899 YPS1YLR120C 1710 nt8.01□□□□□ -1.13
DDR48P18899 SPT5YML010W 3192 nt8.01□□□□□ -1.13
DDR48P18899 tM(CAU)CtM(CAU)C 72 nt8.01□□□□□ -1.13
DDR48P18899 IMT4tM(CAU)E 72 nt8.01□□□□□ -1.13
DDR48P18899 IMT3tM(CAU)J3 72 nt8.01□□□□□ -1.13
DDR48P18899 IMT1tM(CAU)O1 72 nt8.01□□□□□ -1.13
DDR48P18899 IMT2tM(CAU)P 72 nt8.01□□□□□ -1.13
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms