Protein–RNA interactions for Protein: P53921

YNL122C, 54S ribosomal protein bL35m, yeastyeast

Predicted RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL122CP53921 NSR1YGR159C 1245 nt11.93□□□□□ -0.5
YNL122CP53921 YML009W-BYML009W-B 477 nt11.87□□□□□ -0.51
YNL122CP53921 NOP1YDL014W 984 nt11.58□□□□□ -0.56
YNL122CP53921 MDJ1YFL016C 1536 nt10.6□□□□□ -0.71
YNL122CP53921 YKL036CYKL036C 393 nt10.54□□□□□ -0.72
YNL122CP53921 SRX1YKL086W 384 nt10.07□□□□□ -0.8
YNL122CP53921 Q0297Q0297 156 nt10.04□□□□□ -0.8
YNL122CP53921 YJL027CYJL027C 417 nt9.87□□□□□ -0.83
YNL122CP53921 SSA3YBL075C 1950 nt9.61□□□□□ -0.87
YNL122CP53921 YCR051WYCR051W 669 nt9.53□□□□□ -0.88
YNL122CP53921 SCS3YGL126W 1143 nt9.48□□□□□ -0.89
YNL122CP53921 DBP2YNL112W 1641 nt9.31□□□□□ -0.92
YNL122CP53921 YBR190WYBR190W 312 nt9.15□□□□□ -0.94
YNL122CP53921 TRN1tP(UGG)A 72 nt9.14□□□□□ -0.95
YNL122CP53921 SUF9tP(UGG)F 72 nt9.14□□□□□ -0.95
YNL122CP53921 SUF8tP(UGG)H 72 nt9.14□□□□□ -0.95
YNL122CP53921 tP(UGG)LtP(UGG)L 72 nt9.14□□□□□ -0.95
YNL122CP53921 SUF7tP(UGG)M 72 nt9.14□□□□□ -0.95
YNL122CP53921 tP(UGG)N1tP(UGG)N1 72 nt9.14□□□□□ -0.95
YNL122CP53921 tP(UGG)N2tP(UGG)N2 72 nt9.14□□□□□ -0.95
YNL122CP53921 tP(UGG)O1tP(UGG)O1 72 nt9.14□□□□□ -0.95
YNL122CP53921 SUF11tP(UGG)O2 72 nt9.14□□□□□ -0.95
YNL122CP53921 YOL085CYOL085C 342 nt9.09□□□□□ -0.95
YNL122CP53921 CCC1YLR220W 969 nt9.03□□□□□ -0.96
YNL122CP53921 RPP1BYDL130W 321 nt9.01□□□□□ -0.97
YNL122CP53921 RTC3YHR087W 336 nt8.94□□□□□ -0.98
YNL122CP53921 PKP1YIL042C 1185 nt8.92□□□□□ -0.98
YNL122CP53921 RVS167YDR388W 1449 nt8.88□□□□□ -0.99
YNL122CP53921 SCJ1YMR214W 1134 nt8.67□□□□□ -1.02
YNL122CP53921 tP(UGG)O3tP(UGG)O3 72 nt8.61□□□□□ -1.03
YNL122CP53921 PET122YER153C 765 nt8.58□□□□□ -1.04
YNL122CP53921 SCR1SCR1 522 nt8.56□□□□□ -1.04
YNL122CP53921 SHR5YOL110W 714 nt8.5□□□□□ -1.05
YNL122CP53921 ATS1YAL020C 1002 nt8.46□□□□□ -1.06
YNL122CP53921 PUT4YOR348C 1884 nt8.4□□□□□ -1.06
YNL122CP53921 YDJ1YNL064C 1230 nt8.37□□□□□ -1.07
YNL122CP53921 RRN5YLR141W 1092 nt8.33□□□□□ -1.08
YNL122CP53921 URN1YPR152C 1398 nt8.3□□□□□ -1.08
YNL122CP53921 SSA4YER103W 1929 nt8.28□□□□□ -1.08
YNL122CP53921 SPT5YML010W 3192 nt8.28□□□□□ -1.08
YNL122CP53921 RPN10YHR200W 807 nt8.26□□□□□ -1.09
YNL122CP53921 DEP1YAL013W 1218 nt8.22□□□□□ -1.09
YNL122CP53921 OPI9YLR338W 858 nt8.21□□□□□ -1.1
YNL122CP53921 YNL208WYNL208W 600 nt8.17□□□□□ -1.1
YNL122CP53921 PAC11YDR488C 1602 nt8.16□□□□□ -1.1
YNL122CP53921 YER088W-BYER088W-B 147 nt8.16□□□□□ -1.1
YNL122CP53921 RSB1YOR049C 1065 nt8.16□□□□□ -1.1
YNL122CP53921 GAR1YHR089C 618 nt8.15□□□□□ -1.1
YNL122CP53921 SAH1YER043C 1350 nt8.14□□□□□ -1.11
YNL122CP53921 ARE1YCR048W 1833 nt8.11□□□□□ -1.11
YNL122CP53921 BDF1YLR399C 2061 nt8.07□□□□□ -1.12
YNL122CP53921 YJL225CYJL225C 5277 nt8.07□□□□□ -1.12
YNL122CP53921 NVJ2YPR091C 2313 nt8.06□□□□□ -1.12
YNL122CP53921 YHR049C-AYHR049C-A 297 nt8.05□□□□□ -1.12
YNL122CP53921 POA1YBR022W 534 nt8.05□□□□□ -1.12
YNL122CP53921 PUN1YLR414C 792 nt8.02□□□□□ -1.13
YNL122CP53921 BSC6YOL137W 1494 nt8.01□□□□□ -1.13
YNL122CP53921 TAT1YBR069C 1860 nt7.97□□□□□ -1.13
YNL122CP53921 YJR018WYJR018W 363 nt7.93□□□□□ -1.14
YNL122CP53921 RDN37-1RDN37-1 5354 nt7.91□□□□□ -1.14
YNL122CP53921 RDN37-2RDN37-2 5354 nt7.91□□□□□ -1.14
YNL122CP53921 TIR1YER011W 765 nt7.9□□□□□ -1.14
YNL122CP53921 PTC2YER089C 1395 nt7.87□□□□□ -1.15
YNL122CP53921 BUD23YCR047C 828 nt7.87□□□□□ -1.15
YNL122CP53921 PST2YDR032C 597 nt7.84□□□□□ -1.15
YNL122CP53921 FPS1YLL043W 2010 nt7.84□□□□□ -1.15
YNL122CP53921 NAB2YGL122C 1578 nt7.82□□□□□ -1.16
YNL122CP53921 RPP2BYDR382W 333 nt7.8□□□□□ -1.16
YNL122CP53921 SSA1YAL005C 1929 nt7.77□□□□□ -1.17
YNL122CP53921 INM2YDR287W 879 nt7.7□□□□□ -1.18
YNL122CP53921 DAL1YIR027C 1383 nt7.69□□□□□ -1.18
YNL122CP53921 YJR120WYJR120W 351 nt7.68□□□□□ -1.18
YNL122CP53921 FPR4YLR449W 1179 nt7.66□□□□□ -1.18
YNL122CP53921 FIS1YIL065C 468 nt7.65□□□□□ -1.18
YNL122CP53921 MEP2YNL142W 1500 nt7.62□□□□□ -1.19
YNL122CP53921 PHO4YFR034C 939 nt7.6□□□□□ -1.19
YNL122CP53921 BDH2YAL061W 1254 nt7.57□□□□□ -1.2
YNL122CP53921 YBL100CYBL100C 315 nt7.57□□□□□ -1.2
YNL122CP53921 SRB2YHR041C 633 nt7.53□□□□□ -1.2
YNL122CP53921 YGR021WYGR021W 873 nt7.52□□□□□ -1.21
YNL122CP53921 SHU1YHL006C 453 nt7.52□□□□□ -1.21
YNL122CP53921 YKL097CYKL097C 411 nt7.52□□□□□ -1.21
YNL122CP53921 WWM1YFL010C 636 nt7.49□□□□□ -1.21
YNL122CP53921 LSM3YLR438C-A 270 nt7.49□□□□□ -1.21
YNL122CP53921 YBR220CYBR220C 1683 nt7.48□□□□□ -1.21
YNL122CP53921 YPS1YLR120C 1710 nt7.48□□□□□ -1.21
YNL122CP53921 TRM9YML014W 840 nt7.47□□□□□ -1.21
YNL122CP53921 FUN26YAL022C 1554 nt7.46□□□□□ -1.21
YNL122CP53921 YFL021C-AYFL021C-A 855 nt7.45□□□□□ -1.22
YNL122CP53921 DCW1YKL046C 1350 nt7.45□□□□□ -1.22
YNL122CP53921 ALF1YNL148C 765 nt7.44□□□□□ -1.22
YNL122CP53921 YDR095CYDR095C 411 nt7.43□□□□□ -1.22
YNL122CP53921 YHR165W-AYHR165W-A 312 nt7.43□□□□□ -1.22
YNL122CP53921 HOM6YJR139C 1080 nt7.41□□□□□ -1.22
YNL122CP53921 YAL037C-BYAL037C-B 975 nt7.41□□□□□ -1.22
YNL122CP53921 PCH2YBR186W 1695 nt7.41□□□□□ -1.22
YNL122CP53921 UME6YDR207C 2511 nt7.4□□□□□ -1.22
YNL122CP53921 GUT2YIL155C 1950 nt7.4□□□□□ -1.23
YNL122CP53921 SUF2tP(AGG)C 72 nt7.39□□□□□ -1.23
YNL122CP53921 SUF10tP(AGG)N 72 nt7.39□□□□□ -1.23
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms