RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W FAP1P53971 965 aa10.54□□□□□ -0.72
SHS1YDL225W MTC1P47018 478 aaKnown RBP10.15□□□□□ -0.78
SHS1YDL225W PRY3P47033 881 aa10□□□□□ -0.81
SHS1YDL225W DRS1P32892 752 aaKnown RBP9.91□□□□□ -0.82
SHS1YDL225W YCK3P39962 524 aa9.25□□□□□ -0.93
SHS1YDL225W HAA1Q12753 694 aaKnown RBP9.2□□□□□ -0.94
SHS1YDL225W AAD16Q02895 342 aa8.93□□□□□ -0.98
SHS1YDL225W PRI1P10363 409 aa8.66□□□□□ -1.02
SHS1YDL225W BFR2Q06631 534 aaKnown RBP8.56□□□□□ -1.04
SHS1YDL225W DIP2Q12220 943 aaPredicted RBP8.56□□□□□ -1.04
SHS1YDL225W ISW2Q08773 1120 aa8.44□□□□□ -1.06
SHS1YDL225W BUD31P25337 157 aaPredicted RBP8.41□□□□□ -1.06
SHS1YDL225W AVT3P36062 692 aa8.3□□□□□ -1.08
SHS1YDL225W RPG1P38249 964 aaKnown RBP8.29□□□□□ -1.08
SHS1YDL225W RSE1Q04693 1361 aaKnown RBP8.19□□□□□ -1.1
SHS1YDL225W TSR3Q12094 313 aaKnown RBP8.11□□□□□ -1.11
SHS1YDL225W YGL015CP33199 130 aa8.1□□□□□ -1.11
SHS1YDL225W TFA1P36100 482 aa8.07□□□□□ -1.12
SHS1YDL225W REB1P21538 810 aa7.89□□□□□ -1.15
SHS1YDL225W RPL17AP05740 184 aaKnown RBP7.88□□□□□ -1.15
SHS1YDL225W RPL17BP46990 184 aaKnown RBP7.88□□□□□ -1.15
SHS1YDL225W SIS1P25294 352 aaKnown RBP7.86□□□□□ -1.15
SHS1YDL225W MRPL32P25348 183 aa7.82□□□□□ -1.16
SHS1YDL225W SPT21P35209 758 aa7.44□□□□□ -1.22
SHS1YDL225W UBP9P39967 754 aa7.34□□□□□ -1.23
SHS1YDL225W RIM101P33400 625 aa7.32□□□□□ -1.24
SHS1YDL225W YKR023WP36119 530 aaKnown RBP7.32□□□□□ -1.24
SHS1YDL225W CDC27P38042 758 aa7.24□□□□□ -1.25
SHS1YDL225W HOP09932 586 aa7.22□□□□□ -1.25
SHS1YDL225W TFC8Q12308 588 aa7.2□□□□□ -1.26
SHS1YDL225W YIL055CP40523 627 aaKnown RBP7.16□□□□□ -1.26
SHS1YDL225W DCD1P06773 312 aa7.14□□□□□ -1.27
SHS1YDL225W PTP3P40048 928 aa7.08□□□□□ -1.28
SHS1YDL225W UBP10P53874 792 aaPredicted RBP7.06□□□□□ -1.28
SHS1YDL225W OXP1P28273 1286 aa7.05□□□□□ -1.28
SHS1YDL225W MAP2P38174 421 aaKnown RBP7.04□□□□□ -1.28
SHS1YDL225W YAH1Q12184 172 aaKnown RBP7.01□□□□□ -1.29
SHS1YDL225W BCH2P36122 765 aa6.98□□□□□ -1.29
SHS1YDL225W SCY1P53009 804 aa6.97□□□□□ -1.29
SHS1YDL225W SSP1P38871 571 aa6.95□□□□□ -1.3
SHS1YDL225W RSM7P47150 247 aa6.95□□□□□ -1.3
SHS1YDL225W BBC1P47068 1157 aa6.91□□□□□ -1.3
SHS1YDL225W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
SHS1YDL225W SLX5P32828 619 aaKnown RBP6.9□□□□□ -1.31
SHS1YDL225W TIF4632P39936 914 aaKnown RBP6.88□□□□□ -1.31
SHS1YDL225W YLR271WQ06152 274 aa6.86□□□□□ -1.31
SHS1YDL225W RQC2Q12532 1038 aaKnown RBP6.85□□□□□ -1.31
SHS1YDL225W AI2P03876 854 aa6.84□□□□□ -1.31
SHS1YDL225W EPS1P40557 701 aa6.84□□□□□ -1.31
SHS1YDL225W BDF1P35817 686 aa6.81□□□□□ -1.32
SHS1YDL225W TGL3P40308 642 aa6.81□□□□□ -1.32
SHS1YDL225W MGA2P40578 1113 aa6.71□□□□□ -1.34
SHS1YDL225W DMA1P38823 416 aa6.68□□□□□ -1.34
SHS1YDL225W PSD2P53037 1138 aaKnown RBP6.66□□□□□ -1.34
SHS1YDL225W CST9Q06032 482 aa6.65□□□□□ -1.34
SHS1YDL225W MRM1P25270 412 aa6.61□□□□□ -1.35
SHS1YDL225W YOR238WQ08634 303 aa6.56□□□□□ -1.36
SHS1YDL225W YAP5P40574 245 aa6.55□□□□□ -1.36
SHS1YDL225W YJL171CP46992 396 aa6.55□□□□□ -1.36
SHS1YDL225W YBL029C-AQ3E756 94 aa6.55□□□□□ -1.36
SHS1YDL225W RTG3P38165 486 aa6.54□□□□□ -1.36
SHS1YDL225W RGA2Q06407 1009 aa6.52□□□□□ -1.37
SHS1YDL225W NSR1P27476 414 aaKnown RBP RIP-Chip data6.51□□□□□ -1.37not detected
SHS1YDL225W MST1P07236 462 aa6.45□□□□□ -1.38
SHS1YDL225W GTT3P39996 337 aa6.45□□□□□ -1.38
SHS1YDL225W YMR1P47147 688 aaKnown RBP RIP-Chip data6.45□□□□□ -1.38not detected
SHS1YDL225W RCR1P38212 213 aa6.43□□□□□ -1.38
SHS1YDL225W AIR2Q12476 344 aaKnown RBP6.42□□□□□ -1.38
SHS1YDL225W PIB1Q06651 286 aa6.41□□□□□ -1.38
SHS1YDL225W DBP1P24784 617 aaKnown RBP6.4□□□□□ -1.38
SHS1YDL225W RAM2P29703 316 aa6.4□□□□□ -1.38
SHS1YDL225W VPS29P38759 282 aa6.39□□□□□ -1.39
SHS1YDL225W YFR006WP43590 535 aa6.36□□□□□ -1.39
SHS1YDL225W WSC3Q12215 556 aa6.35□□□□□ -1.39
SHS1YDL225W VNX1P42839 908 aa6.34□□□□□ -1.39
SHS1YDL225W STS1P38637 319 aa6.31□□□□□ -1.4
SHS1YDL225W SPP1Q03012 353 aa6.31□□□□□ -1.4
SHS1YDL225W MAK11P20484 414 aaKnown RBP6.3□□□□□ -1.4
SHS1YDL225W FKH1P40466 484 aa6.3□□□□□ -1.4
SHS1YDL225W SAS10Q12136 610 aaPredicted RBP6.3□□□□□ -1.4
SHS1YDL225W MIF2P35201 549 aa6.29□□□□□ -1.4
SHS1YDL225W SET1P38827 1080 aaKnown RBP6.28□□□□□ -1.4
SHS1YDL225W VMA1P17255 1071 aaKnown RBP6.26□□□□□ -1.41
SHS1YDL225W EAP1P36041 632 aaKnown RBP6.26□□□□□ -1.41
SHS1YDL225W MSB4Q12317 492 aa6.25□□□□□ -1.41
SHS1YDL225W TIF11P38912 153 aaKnown RBP6.23□□□□□ -1.41
SHS1YDL225W SET4P42948 560 aa6.23□□□□□ -1.41
SHS1YDL225W BMT6Q12291 365 aa6.23□□□□□ -1.41
SHS1YDL225W COQ8P27697 501 aa6.22□□□□□ -1.41
SHS1YDL225W ULI1P43604 169 aa6.21□□□□□ -1.42
SHS1YDL225W GYP5Q12344 894 aa6.21□□□□□ -1.42
SHS1YDL225W YOL036WQ08206 761 aa6.2□□□□□ -1.42
SHS1YDL225W SAM3Q08986 587 aa6.2□□□□□ -1.42
SHS1YDL225W ABP1P15891 592 aaKnown RBP6.2□□□□□ -1.42
SHS1YDL225W GRE2Q12068 342 aaKnown RBP6.18□□□□□ -1.42
SHS1YDL225W ATH1P48016 1211 aa6.17□□□□□ -1.42
SHS1YDL225W NOP53Q12080 455 aaKnown RBP6.17□□□□□ -1.42
SHS1YDL225W IFH1P39520 1085 aa6.17□□□□□ -1.42
SHS1YDL225W PTC3P34221 468 aaKnown RBP6.16□□□□□ -1.42
SHS1YDL225W EDS1P38073 919 aa6.16□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 8 ms