RNA–Protein interactions for RNA: YLR235C

YLR235C, Transcript of Dubious open reading frame, yeastyeast

Gene YLR235C, Length 399 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR235CYLR235C NSR1P27476 414 aaKnown RBP RIP-Chip data13.98□□□□□ -0.17not detected
YLR235CYLR235C YJR008WP47085 338 aa13.98□□□□□ -0.17
YLR235CYLR235C SYF1Q04048 859 aaPredicted RBP13.98□□□□□ -0.17
YLR235CYLR235C NOP8Q08287 484 aaPredicted RBP13.98□□□□□ -0.17
YLR235CYLR235C RPS9BP05755 195 aaKnown RBP13.97□□□□□ -0.17
YLR235CYLR235C YRB30P53107 440 aaPredicted RBP13.97□□□□□ -0.17
YLR235CYLR235C SAS4Q04003 481 aa13.96□□□□□ -0.17
YLR235CYLR235C RPN1P38764 993 aaKnown RBP13.95□□□□□ -0.18
YLR235CYLR235C GRX6Q12438 231 aa13.95□□□□□ -0.18
YLR235CYLR235C RVB2Q12464 471 aaKnown RBP13.95□□□□□ -0.18
YLR235CYLR235C TOP1P04786 769 aa13.94□□□□□ -0.18
YLR235CYLR235C CAF20P12962 161 aaKnown RBP13.94□□□□□ -0.18
YLR235CYLR235C UBP16Q02863 499 aa13.94□□□□□ -0.18
YLR235CYLR235C FRD1P32614 470 aaKnown RBP13.93□□□□□ -0.18
YLR235CYLR235C YKU70P32807 602 aa13.92□□□□□ -0.18
YLR235CYLR235C YPP1P46951 817 aa13.92□□□□□ -0.18
YLR235CYLR235C FPK1P53739 893 aa13.92□□□□□ -0.18
YLR235CYLR235C FCP1Q03254 732 aa13.92□□□□□ -0.18
YLR235CYLR235C ICL1P28240 557 aaPredicted RBP13.91□□□□□ -0.18
YLR235CYLR235C SET1P38827 1080 aaKnown RBP13.91□□□□□ -0.18
YLR235CYLR235C ITC1P53125 1264 aa13.89□□□□□ -0.19
YLR235CYLR235C YGR122WP53272 402 aa13.89□□□□□ -0.19
YLR235CYLR235C NAB6Q03735 1134 aaKnown RBP RIP-Chip data13.89□□□□□ -0.19not detected
YLR235CYLR235C PSH1Q12161 406 aa13.89□□□□□ -0.19
YLR235CYLR235C SUP35P05453 685 aaKnown RBP13.88□□□□□ -0.19
YLR235CYLR235C RAD24P32641 659 aa13.88□□□□□ -0.19
YLR235CYLR235C SHC1P39000 512 aa13.88□□□□□ -0.19
YLR235CYLR235C SLI15P38283 698 aa13.87□□□□□ -0.19
YLR235CYLR235C SAC3P46674 1301 aa13.87□□□□□ -0.19
YLR235CYLR235C DPH6Q12429 685 aa13.86□□□□□ -0.19
YLR235CYLR235C MTC5Q03897 1148 aa13.85□□□□□ -0.19
YLR235CYLR235C CSI1Q04368 295 aa13.85□□□□□ -0.19
YLR235CYLR235C SSA4P22202 642 aaKnown RBP13.84□□□□□ -0.19
YLR235CYLR235C SWC3P31376 625 aa13.84□□□□□ -0.19
YLR235CYLR235C PRS1P32895 427 aaKnown RBP13.84□□□□□ -0.19
YLR235CYLR235C UBP12P39538 1254 aa13.84□□□□□ -0.19
YLR235CYLR235C RRD1P40454 393 aaKnown RBP13.84□□□□□ -0.19
YLR235CYLR235C ATG20Q07528 640 aa13.84□□□□□ -0.19
YLR235CYLR235C DAL5P15365 543 aa13.83□□□□□ -0.2
YLR235CYLR235C HKR1P41809 1802 aa13.83□□□□□ -0.2
YLR235CYLR235C RAD2P07276 1031 aa13.82□□□□□ -0.2
YLR235CYLR235C RPS19AP07280 144 aaKnown RBP13.82□□□□□ -0.2
YLR235CYLR235C RPS19BP07281 144 aaPredicted RBP13.82□□□□□ -0.2
YLR235CYLR235C BOI2P39969 1040 aa13.82□□□□□ -0.2
YLR235CYLR235C YIL092WP40497 633 aa13.82□□□□□ -0.2
YLR235CYLR235C PEX21P50091 288 aa13.82□□□□□ -0.2
YLR235CYLR235C UBX2Q04228 584 aa13.82□□□□□ -0.2
YLR235CYLR235C RET1P22276 1149 aaKnown RBP13.81□□□□□ -0.2
YLR235CYLR235C TIF4632P39936 914 aaKnown RBP13.81□□□□□ -0.2
YLR235CYLR235C ICP55P40051 511 aa13.8□□□□□ -0.2
YLR235CYLR235C DIP2Q12220 943 aaPredicted RBP13.8□□□□□ -0.2
YLR235CYLR235C THS1P04801 734 aaKnown RBP13.79□□□□□ -0.2
YLR235CYLR235C PUS5Q06244 254 aa13.79□□□□□ -0.2
YLR235CYLR235C SNU66Q12420 587 aaPredicted RBP13.79□□□□□ -0.2
YLR235CYLR235C FAS2P19097 1887 aaKnown RBP13.78□□□□□ -0.2
YLR235CYLR235C MSM1P22438 575 aa13.78□□□□□ -0.2
YLR235CYLR235C KRE2P27809 442 aa13.78□□□□□ -0.2
YLR235CYLR235C DPL1Q05567 589 aa13.78□□□□□ -0.2
YLR235CYLR235C NGR1P32831 672 aaKnown RBP13.77□□□□□ -0.21
YLR235CYLR235C THI3Q07471 609 aa13.77□□□□□ -0.21
YLR235CYLR235C TRP5P00931 707 aaKnown RBP13.76□□□□□ -0.21
YLR235CYLR235C MGM1P32266 881 aa13.76□□□□□ -0.21
YLR235CYLR235C TFA1P36100 482 aa13.75□□□□□ -0.21
YLR235CYLR235C SRC1Q03707 834 aa13.75□□□□□ -0.21
YLR235CYLR235C YNG2P38806 282 aaKnown RBP13.74□□□□□ -0.21
YLR235CYLR235C RPT4P53549 437 aaKnown RBP13.74□□□□□ -0.21
YLR235CYLR235C RTG2P32608 588 aaKnown RBP13.73□□□□□ -0.21
YLR235CYLR235C SPL2P38839 148 aa13.72□□□□□ -0.21
YLR235CYLR235C HGH1P48362 394 aaKnown RBP13.72□□□□□ -0.21
YLR235CYLR235C NUG1P40010 520 aaKnown RBP13.71□□□□□ -0.21
YLR235CYLR235C SET4P42948 560 aa13.71□□□□□ -0.21
YLR235CYLR235C HXT10P43581 546 aa13.71□□□□□ -0.21
YLR235CYLR235C RRG1Q12167 365 aaPredicted RBP13.71□□□□□ -0.21
YLR235CYLR235C YLR278CQ05854 1341 aa13.7□□□□□ -0.22
YLR235CYLR235C SSF1P38789 453 aaPredicted RBP13.7□□□□□ -0.22
YLR235CYLR235C GLC3P32775 704 aa13.69□□□□□ -0.22
YLR235CYLR235C SPO1P53541 631 aa13.69□□□□□ -0.22
YLR235CYLR235C TIM50Q02776 476 aa13.69□□□□□ -0.22
YLR235CYLR235C CRF1Q04930 467 aa13.69□□□□□ -0.22
YLR235CYLR235C ADR1P07248 1323 aa13.68□□□□□ -0.22
YLR235CYLR235C DUR1,2P32528 1835 aaKnown RBP13.67□□□□□ -0.22
YLR235CYLR235C GAP1P19145 602 aaPredicted RBP13.67□□□□□ -0.22
YLR235CYLR235C FET4P40988 552 aa13.67□□□□□ -0.22
YLR235CYLR235C PSF3Q12146 194 aa13.67□□□□□ -0.22
YLR235CYLR235C AIM7Q12156 149 aa13.67□□□□□ -0.22
YLR235CYLR235C TOM1Q03280 3268 aa13.67□□□□□ -0.22
YLR235CYLR235C FIG2P25653 1609 aa13.67□□□□□ -0.22
YLR235CYLR235C GCD7P32502 381 aaPredicted RBP13.66□□□□□ -0.22
YLR235CYLR235C AFG2P32794 780 aa13.66□□□□□ -0.22
YLR235CYLR235C FUN12P39730 1002 aaKnown RBP13.66□□□□□ -0.22
YLR235CYLR235C TRM44Q02648 567 aaKnown RBP13.66□□□□□ -0.22
YLR235CYLR235C IRC4Q03036 179 aa13.66□□□□□ -0.22
YLR235CYLR235C GAS5Q08193 484 aa13.66□□□□□ -0.22
YLR235CYLR235C POM152P39685 1337 aa13.65□□□□□ -0.22
YLR235CYLR235C GSM1P42950 618 aa13.65□□□□□ -0.22
YLR235CYLR235C PRP42Q03776 544 aaKnown RBP13.65□□□□□ -0.22
YLR235CYLR235C GYP5Q12344 894 aa13.65□□□□□ -0.22
YLR235CYLR235C VHR2P40041 505 aa13.64□□□□□ -0.23
YLR235CYLR235C PUF6Q04373 656 aaKnown RBP13.64□□□□□ -0.23
YLR235CYLR235C NCB2Q92317 146 aa13.64□□□□□ -0.23
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms