RNA–Protein interactions for RNA: YLR180W

SAM1, Transcript of S-adenosylmethionine synthetase, yeastyeast

Gene SAM1, Length 1,149 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SAM1YLR180W SYF1Q04048 859 aaPredicted RBP12.39□□□□□ -0.43
SAM1YLR180W DCD1P06773 312 aa12.38□□□□□ -0.43
SAM1YLR180W UGA3P26370 528 aa12.38□□□□□ -0.43
SAM1YLR180W MAC1P35192 417 aa12.38□□□□□ -0.43
SAM1YLR180W TYW1Q08960 810 aaKnown RBP12.38□□□□□ -0.43
SAM1YLR180W EMP47P43555 445 aa12.37□□□□□ -0.43
SAM1YLR180W TRM44Q02648 567 aaKnown RBP12.37□□□□□ -0.43
SAM1YLR180W CWC15Q03772 175 aaKnown RBP12.37□□□□□ -0.43
SAM1YLR180W HAT1Q12341 374 aa12.37□□□□□ -0.43
SAM1YLR180W TRK1P12685 1235 aa12.35□□□□□ -0.43
SAM1YLR180W YGR117CP53270 476 aa12.35□□□□□ -0.43
SAM1YLR180W APL2P36000 726 aaPredicted RBP12.34□□□□□ -0.43
SAM1YLR180W NSE3Q05541 303 aa12.34□□□□□ -0.43
SAM1YLR180W SSK22P25390 1331 aaPredicted RBP12.34□□□□□ -0.43
SAM1YLR180W YPR204WQ08995 1032 aa12.33□□□□□ -0.44
SAM1YLR180W TIF4632P39936 914 aaKnown RBP12.32□□□□□ -0.44
SAM1YLR180W VPS4P52917 437 aa12.32□□□□□ -0.44
SAM1YLR180W HPR1P17629 752 aaKnown RBP12.31□□□□□ -0.44
SAM1YLR180W BSD2P38356 321 aa12.31□□□□□ -0.44
SAM1YLR180W VPS64Q03944 604 aa12.29□□□□□ -0.44
SAM1YLR180W HVG1P0CE11 249 aa12.28□□□□□ -0.44
SAM1YLR180W SET4P42948 560 aa12.28□□□□□ -0.44
SAM1YLR180W NCS6P53088 359 aa12.28□□□□□ -0.44
SAM1YLR180W CRF1Q04930 467 aa12.28□□□□□ -0.44
SAM1YLR180W PIB1Q06651 286 aa12.28□□□□□ -0.44
SAM1YLR180W HKR1P41809 1802 aa12.27□□□□□ -0.44
SAM1YLR180W AFG2P32794 780 aa12.27□□□□□ -0.45
SAM1YLR180W STV1P37296 890 aa12.27□□□□□ -0.45
SAM1YLR180W YNL050CP53952 270 aa12.27□□□□□ -0.45
SAM1YLR180W IOC4Q04213 475 aa12.27□□□□□ -0.45
SAM1YLR180W RRG1Q12167 365 aaPredicted RBP12.26□□□□□ -0.45
SAM1YLR180W CSR2Q12734 1121 aa12.25□□□□□ -0.45
SAM1YLR180W LYS2P07702 1392 aa12.24□□□□□ -0.45
SAM1YLR180W ZDS2P54786 942 aa12.23□□□□□ -0.45
SAM1YLR180W CST9Q06032 482 aa12.23□□□□□ -0.45
SAM1YLR180W GAS5Q08193 484 aa12.23□□□□□ -0.45
SAM1YLR180W RRT6P53117 311 aaPredicted RBP12.22□□□□□ -0.45
SAM1YLR180W SEN54Q02825 467 aaPredicted RBP12.22□□□□□ -0.45
SAM1YLR180W PKH1Q03407 766 aa12.22□□□□□ -0.45
SAM1YLR180W PCS60P38137 543 aaKnown RBP RIP-Chip data12.21□□□□□ -0.45not detected
SAM1YLR180W PNT1P38969 423 aa12.21□□□□□ -0.45
SAM1YLR180W RRP46P53256 223 aaPredicted RBP12.21□□□□□ -0.45
SAM1YLR180W KRE2P27809 442 aa12.2□□□□□ -0.46
SAM1YLR180W PAM1P37304 830 aaKnown RBP12.2□□□□□ -0.46
SAM1YLR180W TRP5P00931 707 aaKnown RBP12.19□□□□□ -0.46
SAM1YLR180W YKR023WP36119 530 aaKnown RBP12.19□□□□□ -0.46
SAM1YLR180W RSC30P38781 883 aa12.19□□□□□ -0.46
SAM1YLR180W ZDS1P50111 915 aaKnown RBP12.19□□□□□ -0.46
SAM1YLR180W UBX2Q04228 584 aa12.19□□□□□ -0.46
SAM1YLR180W YLR271WQ06152 274 aa12.19□□□□□ -0.46
SAM1YLR180W DPH6Q12429 685 aa12.19□□□□□ -0.46
SAM1YLR180W PRS1P32895 427 aaKnown RBP12.18□□□□□ -0.46
SAM1YLR180W MOT2P34909 587 aaKnown RBP12.17□□□□□ -0.46
SAM1YLR180W APE3P37302 537 aaKnown RBP12.17□□□□□ -0.46
SAM1YLR180W COQ4O13525 335 aa12.16□□□□□ -0.46
SAM1YLR180W CBP1P07252 654 aa12.16□□□□□ -0.46
SAM1YLR180W GSM1P42950 618 aa12.16□□□□□ -0.46
SAM1YLR180W BMS1Q08965 1183 aaKnown RBP12.16□□□□□ -0.46
SAM1YLR180W RPP0P05317 312 aaKnown RBP12.15□□□□□ -0.46
SAM1YLR180W ICP55P40051 511 aa12.15□□□□□ -0.46
SAM1YLR180W MAM1P40065 302 aa12.14□□□□□ -0.47
SAM1YLR180W FCP1Q03254 732 aa12.14□□□□□ -0.47
SAM1YLR180W YBR287WP38355 427 aa12.13□□□□□ -0.47
SAM1YLR180W RPT4P53549 437 aaKnown RBP12.13□□□□□ -0.47
SAM1YLR180W FLO11P08640 1367 aa12.12□□□□□ -0.47
SAM1YLR180W RTR1P40084 226 aaPredicted RBP12.11□□□□□ -0.47
SAM1YLR180W PRP42Q03776 544 aaKnown RBP12.11□□□□□ -0.47
SAM1YLR180W RBA50Q04418 439 aa12.11□□□□□ -0.47
SAM1YLR180W PRD1P25375 712 aa12.1□□□□□ -0.47
SAM1YLR180W SPL2P38839 148 aa12.1□□□□□ -0.47
SAM1YLR180W DNM1P54861 757 aa12.1□□□□□ -0.47
SAM1YLR180W YOL057WQ08225 711 aa12.1□□□□□ -0.47
SAM1YLR180W MAL31P38156 614 aa12.07□□□□□ -0.48
SAM1YLR180W MGM1P32266 881 aa12.06□□□□□ -0.48
SAM1YLR180W VPS27P40343 622 aaKnown RBP12.06□□□□□ -0.48
SAM1YLR180W CDC45Q08032 650 aa12.06□□□□□ -0.48
SAM1YLR180W SWI1P09547 1314 aa12.06□□□□□ -0.48
SAM1YLR180W GSC2P40989 1895 aa12.06□□□□□ -0.48
SAM1YLR180W NGR1P32831 672 aaKnown RBP12.05□□□□□ -0.48
SAM1YLR180W THI3Q07471 609 aa12.05□□□□□ -0.48
SAM1YLR180W UTP7P40055 554 aaKnown RBP12.04□□□□□ -0.48
SAM1YLR180W CST6P40535 587 aa12.04□□□□□ -0.48
SAM1YLR180W JIP4Q03361 876 aa12.04□□□□□ -0.48
SAM1YLR180W SGD1Q06132 899 aa12.04□□□□□ -0.48
SAM1YLR180W GAL2P13181 574 aa12.03□□□□□ -0.48
SAM1YLR180W RPS7AP26786 190 aaKnown RBP12.03□□□□□ -0.48
SAM1YLR180W NIT1P40447 199 aa12.03□□□□□ -0.48
SAM1YLR180W GYP7P48365 746 aa12.03□□□□□ -0.48
SAM1YLR180W MTC3P53077 123 aa12.03□□□□□ -0.48
SAM1YLR180W YDL144CQ07589 356 aa12.03□□□□□ -0.48
SAM1YLR180W ASH1P34233 588 aa12.02□□□□□ -0.49
SAM1YLR180W TOS4Q06266 489 aa12.02□□□□□ -0.49
SAM1YLR180W SAC3P46674 1301 aa12.02□□□□□ -0.49
SAM1YLR180W ARG82P07250 355 aa12.01□□□□□ -0.49
SAM1YLR180W NUP133P36161 1157 aa12.01□□□□□ -0.49
SAM1YLR180W YRB30P53107 440 aaPredicted RBP12.01□□□□□ -0.49
SAM1YLR180W ITC1P53125 1264 aa12.01□□□□□ -0.49
SAM1YLR180W ACK1Q07622 623 aaPredicted RBP12.01□□□□□ -0.49
SAM1YLR180W VPS13Q07878 3144 aa12□□□□□ -0.49
SAM1YLR180W YJR008WP47085 338 aa12□□□□□ -0.49
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms