RNA–Protein interactions for RNA: YKL096W

CWP1, Transcript of Cell wall mannoprotein that localizes to birth scars of daughter cells, yeast

Gene CWP1, Length 720 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CWP1	YKL096W	TOS1	P38288	455 aa		13.99	□□□□□ -0.17
CWP1	YKL096W	SPO1	P53541	631 aa		13.98	□□□□□ -0.17
CWP1	YKL096W	GCD7	P32502	381 aa	Predicted RBP	13.96	□□□□□ -0.17
CWP1	YKL096W	UBP12	P39538	1254 aa		13.96	□□□□□ -0.17
CWP1	YKL096W	SSK22	P25390	1331 aa	Predicted RBP	13.95	□□□□□ -0.18
CWP1	YKL096W	TFA1	P36100	482 aa		13.95	□□□□□ -0.18
CWP1	YKL096W	NOP2	P40991	618 aa	Known RBP	13.95	□□□□□ -0.18
CWP1	YKL096W	HGH1	P48362	394 aa	Known RBP	13.95	□□□□□ -0.18
CWP1	YKL096W	PKH1	Q03407	766 aa		13.95	□□□□□ -0.18
CWP1	YKL096W	ITC1	P53125	1264 aa		13.94	□□□□□ -0.18
CWP1	YKL096W	FCP1	Q03254	732 aa		13.94	□□□□□ -0.18
CWP1	YKL096W	RAT1	Q02792	1006 aa	Known RBP	13.93	□□□□□ -0.18
CWP1	YKL096W	HAT1	Q12341	374 aa		13.93	□□□□□ -0.18
CWP1	YKL096W	RIX7	Q07844	837 aa	Known RBP	13.92	□□□□□ -0.18
CWP1	YKL096W	CTI6	Q08923	506 aa		13.92	□□□□□ -0.18
CWP1	YKL096W	MTC5	Q03897	1148 aa		13.91	□□□□□ -0.18
CWP1	YKL096W	PSH1	Q12161	406 aa		13.9	□□□□□ -0.18
CWP1	YKL096W	DIP2	Q12220	943 aa	Predicted RBP	13.9	□□□□□ -0.18
CWP1	YKL096W	HPC2	Q01448	625 aa		13.89	□□□□□ -0.19
CWP1	YKL096W	DIB1	Q06819	143 aa	Predicted RBP	13.89	□□□□□ -0.19
CWP1	YKL096W	HXT10	P43581	546 aa		13.88	□□□□□ -0.19
CWP1	YKL096W	SAC3	P46674	1301 aa		13.88	□□□□□ -0.19
CWP1	YKL096W	NMD2	P38798	1089 aa	Known RBP	13.85	□□□□□ -0.19
CWP1	YKL096W	SUP35	P05453	685 aa	Known RBP	13.84	□□□□□ -0.19
CWP1	YKL096W	SSF1	P38789	453 aa	Predicted RBP	13.84	□□□□□ -0.19
CWP1	YKL096W	AVT3	P36062	692 aa		13.83	□□□□□ -0.2
CWP1	YKL096W	BDF2	Q07442	638 aa		13.83	□□□□□ -0.2
CWP1	YKL096W	ECM16	Q04217	1267 aa	Known RBP	13.81	□□□□□ -0.2
CWP1	YKL096W	PFF1	P38244	976 aa		13.8	□□□□□ -0.2
CWP1	YKL096W	UBP16	Q02863	499 aa		13.8	□□□□□ -0.2
CWP1	YKL096W	SYF1	Q04048	859 aa	Predicted RBP	13.8	□□□□□ -0.2
CWP1	YKL096W	CDC16	P09798	840 aa		13.78	□□□□□ -0.2
CWP1	YKL096W	ERT1	P38140	529 aa		13.78	□□□□□ -0.2
CWP1	YKL096W	SIT4	P20604	311 aa		13.77	□□□□□ -0.21
CWP1	YKL096W	RFC1	P38630	861 aa	Known RBP	13.77	□□□□□ -0.21
CWP1	YKL096W	NKP2	Q06162	153 aa		13.77	□□□□□ -0.21
CWP1	YKL096W	SNU66	Q12420	587 aa	Predicted RBP	13.77	□□□□□ -0.21
CWP1	YKL096W	NCB2	Q92317	146 aa		13.77	□□□□□ -0.21
CWP1	YKL096W	GYP5	Q12344	894 aa		13.76	□□□□□ -0.21
CWP1	YKL096W	ADR1	P07248	1323 aa		13.75	□□□□□ -0.21
CWP1	YKL096W	RPC31	P17890	251 aa		13.75	□□□□□ -0.21
CWP1	YKL096W	MSN5	P52918	1224 aa		13.75	□□□□□ -0.21
CWP1	YKL096W	IRC3	Q06683	689 aa		13.75	□□□□□ -0.21
CWP1	YKL096W	BDP1	P46678	594 aa		13.74	□□□□□ -0.21
CWP1	YKL096W	NOT3	P06102	836 aa	Known RBP	13.73	□□□□□ -0.21
CWP1	YKL096W	SMY1	P32364	656 aa	Known RBP	13.73	□□□□□ -0.21
CWP1	YKL096W	YKL222C	P35995	705 aa		13.73	□□□□□ -0.21
CWP1	YKL096W	EAF6	P47128	113 aa		13.73	□□□□□ -0.21
CWP1	YKL096W	YGL242C	P53066	181 aa		13.73	□□□□□ -0.21
CWP1	YKL096W	ERO1	Q03103	563 aa		13.73	□□□□□ -0.21
CWP1	YKL096W	DPH6	Q12429	685 aa		13.73	□□□□□ -0.21
CWP1	YKL096W	RAD50	P12753	1312 aa		13.72	□□□□□ -0.21
CWP1	YKL096W	CAF20	P12962	161 aa	Known RBP	13.72	□□□□□ -0.21
CWP1	YKL096W	SEC18	P18759	758 aa	Known RBP	13.72	□□□□□ -0.21
CWP1	YKL096W	FRD1	P32614	470 aa	Known RBP	13.72	□□□□□ -0.21
CWP1	YKL096W	SLA1	P32790	1244 aa		13.72	□□□□□ -0.21
CWP1	YKL096W	KTR3	P38130	404 aa	Predicted RBP	13.72	□□□□□ -0.21
CWP1	YKL096W	ECM21	P38167	1117 aa	Known RBP	13.72	□□□□□ -0.21
CWP1	YKL096W	ICP55	P40051	511 aa		13.72	□□□□□ -0.21
CWP1	YKL096W	PMD1	P32634	1753 aa		13.72	□□□□□ -0.21
CWP1	YKL096W	NGR1	P32831	672 aa	Known RBP	13.71	□□□□□ -0.21
CWP1	YKL096W	AI2	P03876	854 aa		13.7	□□□□□ -0.22
CWP1	YKL096W	CTT1	P06115	562 aa		13.7	□□□□□ -0.22
CWP1	YKL096W	CWH41	P53008	833 aa		13.7	□□□□□ -0.22
CWP1	YKL096W	MGM1	P32266	881 aa		13.69	□□□□□ -0.22
CWP1	YKL096W	RPN1	P38764	993 aa	Known RBP	13.69	□□□□□ -0.22
CWP1	YKL096W	MLC1	P53141	149 aa		13.69	□□□□□ -0.22
CWP1	YKL096W	ALO1	P54783	526 aa	Known RBP	13.69	□□□□□ -0.22
CWP1	YKL096W	THI3	Q07471	609 aa		13.69	□□□□□ -0.22
CWP1	YKL096W	POM152	P39685	1337 aa		13.68	□□□□□ -0.22
CWP1	YKL096W	PDR18	P53756	1333 aa		13.68	□□□□□ -0.22
CWP1	YKL096W	SAS4	Q04003	481 aa		13.68	□□□□□ -0.22
CWP1	YKL096W	KIN4	Q01919	800 aa		13.67	□□□□□ -0.22
CWP1	YKL096W	KRE2	P27809	442 aa		13.66	□□□□□ -0.22
CWP1	YKL096W	SPL2	P38839	148 aa		13.66	□□□□□ -0.22
CWP1	YKL096W	YNL193W	P53870	558 aa		13.66	□□□□□ -0.22
CWP1	YKL096W	SRC1	Q03707	834 aa		13.66	□□□□□ -0.22
CWP1	YKL096W	RPN7	Q06103	429 aa	Known RBP	13.66	□□□□□ -0.22
CWP1	YKL096W	NUG1	P40010	520 aa	Known RBP	13.65	□□□□□ -0.22
CWP1	YKL096W	GLO3	P38682	493 aa	Known RBP	13.63	□□□□□ -0.23
CWP1	YKL096W	HAL5	P38970	855 aa	Known RBP	13.63	□□□□□ -0.23
CWP1	YKL096W	MRPS35	P53292	345 aa		13.63	□□□□□ -0.23
CWP1	YKL096W	BRE1	Q07457	700 aa	Known RBP	13.63	□□□□□ -0.23
CWP1	YKL096W	EPS1	P40557	701 aa		13.62	□□□□□ -0.23
CWP1	YKL096W	RPT4	P53549	437 aa	Known RBP	13.62	□□□□□ -0.23
CWP1	YKL096W	DUR1,2	P32528	1835 aa	Known RBP	13.62	□□□□□ -0.23
CWP1	YKL096W	PIF1	P07271	859 aa		13.61	□□□□□ -0.23
CWP1	YKL096W	YER156C	P40093	338 aa	Known RBP	13.61	□□□□□ -0.23
CWP1	YKL096W	GCR2	Q01722	534 aa		13.61	□□□□□ -0.23
CWP1	YKL096W	RMD1	Q03441	430 aa		13.61	□□□□□ -0.23
CWP1	YKL096W	GRX6	Q12438	231 aa		13.61	□□□□□ -0.23
CWP1	YKL096W	FIG2	P25653	1609 aa		13.61	□□□□□ -0.23
CWP1	YKL096W	RET1	P22276	1149 aa	Known RBP	13.6	□□□□□ -0.23
CWP1	YKL096W	BRN1	P38170	754 aa		13.6	□□□□□ -0.23
CWP1	YKL096W	UBX2	Q04228	584 aa		13.6	□□□□□ -0.23
CWP1	YKL096W	VAS1	P07806	1104 aa	Known RBP	13.59	□□□□□ -0.23
CWP1	YKL096W	PIB2	P53191	635 aa		13.59	□□□□□ -0.23
CWP1	YKL096W	LCB1	P25045	558 aa	Known RBP	13.58	□□□□□ -0.24
CWP1	YKL096W	RRI2	Q12348	645 aa		13.58	□□□□□ -0.24
CWP1	YKL096W	KTR1	P27810	393 aa	Known RBP	13.57	□□□□□ -0.24

Retrieved 100 of 5,963 RNA–protein pairs in 115.3 ms