RNA–Protein interactions for RNA: YGR279C

SCW4, Transcript of Cell wall protein with similarity to glucanases, yeastyeast

Gene SCW4, Length 1,161 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCW4YGR279C CTH1P47976 325 aa6.57□□□□□ -1.36
SCW4YGR279C FPR3P38911 411 aaKnown RBP6.56□□□□□ -1.36
SCW4YGR279C TEA1P47988 759 aa6.56□□□□□ -1.36
SCW4YGR279C UBP10P53874 792 aaPredicted RBP6.56□□□□□ -1.36
SCW4YGR279C MTC5Q03897 1148 aa6.56□□□□□ -1.36
SCW4YGR279C NOP8Q08287 484 aaPredicted RBP6.56□□□□□ -1.36
SCW4YGR279C YPR204WQ08995 1032 aa6.56□□□□□ -1.36
SCW4YGR279C LPD1P09624 499 aaKnown RBP6.55□□□□□ -1.36
SCW4YGR279C MRP7P12687 371 aa6.55□□□□□ -1.36
SCW4YGR279C BCH2P36122 765 aa6.55□□□□□ -1.36
SCW4YGR279C HAT1Q12341 374 aa6.55□□□□□ -1.36
SCW4YGR279C SAC3P46674 1301 aa6.54□□□□□ -1.36
SCW4YGR279C DAL5P15365 543 aa6.54□□□□□ -1.36
SCW4YGR279C ARG8P18544 423 aa6.54□□□□□ -1.36
SCW4YGR279C ECM16Q04217 1267 aaKnown RBP6.54□□□□□ -1.36
SCW4YGR279C SER1P33330 395 aaKnown RBP6.53□□□□□ -1.36
SCW4YGR279C YKL222CP35995 705 aa6.52□□□□□ -1.37
SCW4YGR279C PFF1P38244 976 aa6.52□□□□□ -1.37
SCW4YGR279C SSF1P38789 453 aaPredicted RBP6.52□□□□□ -1.37
SCW4YGR279C DMA1P38823 416 aa6.52□□□□□ -1.37
SCW4YGR279C SWI1P09547 1314 aa6.51□□□□□ -1.37
SCW4YGR279C SIT4P20604 311 aa6.51□□□□□ -1.37
SCW4YGR279C SCY1P53009 804 aa6.51□□□□□ -1.37
SCW4YGR279C GCD7P32502 381 aaPredicted RBP6.5□□□□□ -1.37
SCW4YGR279C NUP133P36161 1157 aa6.5□□□□□ -1.37
SCW4YGR279C ERT1P38140 529 aa6.5□□□□□ -1.37
SCW4YGR279C YBR287WP38355 427 aa6.5□□□□□ -1.37
SCW4YGR279C UBP12P39538 1254 aa6.5□□□□□ -1.37
SCW4YGR279C BOI2P39969 1040 aa6.5□□□□□ -1.37
SCW4YGR279C HPC2Q01448 625 aa6.5□□□□□ -1.37
SCW4YGR279C SYF1Q04048 859 aaPredicted RBP6.5□□□□□ -1.37
SCW4YGR279C CTT1P06115 562 aa6.49□□□□□ -1.37
SCW4YGR279C YGL082WP53155 381 aa6.49□□□□□ -1.37
SCW4YGR279C VPS64Q03944 604 aa6.49□□□□□ -1.37
SCW4YGR279C CSI1Q04368 295 aa6.49□□□□□ -1.37
SCW4YGR279C YNG2P38806 282 aaKnown RBP6.48□□□□□ -1.37
SCW4YGR279C NUG1P40010 520 aaKnown RBP6.48□□□□□ -1.37
SCW4YGR279C POL32P47110 350 aa6.48□□□□□ -1.37
SCW4YGR279C RSM7P47150 247 aa6.48□□□□□ -1.37
SCW4YGR279C ITC1P53125 1264 aa6.48□□□□□ -1.37
SCW4YGR279C ZDS2P54786 942 aa6.48□□□□□ -1.37
SCW4YGR279C PKH1Q03407 766 aa6.48□□□□□ -1.37
SCW4YGR279C UBX2Q04228 584 aa6.48□□□□□ -1.37
SCW4YGR279C BDF2Q07442 638 aa6.48□□□□□ -1.37
SCW4YGR279C UTP10P42945 1769 aaKnown RBP6.48□□□□□ -1.37
SCW4YGR279C TRP5P00931 707 aaKnown RBP6.47□□□□□ -1.37
SCW4YGR279C APL2P36000 726 aaPredicted RBP6.47□□□□□ -1.37
SCW4YGR279C ERO1Q03103 563 aa6.47□□□□□ -1.37
SCW4YGR279C SSP1P38871 571 aa6.46□□□□□ -1.38
SCW4YGR279C IRC3Q06683 689 aa6.46□□□□□ -1.38
SCW4YGR279C PSF3Q12146 194 aa6.46□□□□□ -1.38
SCW4YGR279C PSH1Q12161 406 aa6.46□□□□□ -1.38
SCW4YGR279C RAD24P32641 659 aa6.45□□□□□ -1.38
SCW4YGR279C NCB2Q92317 146 aa6.45□□□□□ -1.38
SCW4YGR279C PIF1P07271 859 aa6.44□□□□□ -1.38
SCW4YGR279C NPL4P33755 580 aa6.44□□□□□ -1.38
SCW4YGR279C MSN5P52918 1224 aa6.44□□□□□ -1.38
SCW4YGR279C PUF6Q04373 656 aaKnown RBP6.44□□□□□ -1.38
SCW4YGR279C SNU66Q12420 587 aaPredicted RBP6.44□□□□□ -1.38
SCW4YGR279C DPH6Q12429 685 aa6.44□□□□□ -1.38
SCW4YGR279C GRX6Q12438 231 aa6.44□□□□□ -1.38
SCW4YGR279C ADR1P07248 1323 aa6.44□□□□□ -1.38
SCW4YGR279C CDC16P09798 840 aa6.43□□□□□ -1.38
SCW4YGR279C EPS1P40557 701 aa6.43□□□□□ -1.38
SCW4YGR279C GEF1P37020 779 aa6.42□□□□□ -1.38
SCW4YGR279C SPO1P53541 631 aa6.42□□□□□ -1.38
SCW4YGR279C UBP16Q02863 499 aa6.42□□□□□ -1.38
SCW4YGR279C RIX7Q07844 837 aaKnown RBP6.42□□□□□ -1.38
SCW4YGR279C CTI6Q08923 506 aa6.42□□□□□ -1.38
SCW4YGR279C GYP5Q12344 894 aa6.42□□□□□ -1.38
SCW4YGR279C SSA1P10591 642 aaKnown RBP6.41□□□□□ -1.38
SCW4YGR279C ICP55P40051 511 aa6.41□□□□□ -1.38
SCW4YGR279C SWC3P31376 625 aa6.4□□□□□ -1.38
SCW4YGR279C YER156CP40093 338 aaKnown RBP6.4□□□□□ -1.38
SCW4YGR279C YGR122WP53272 402 aa6.4□□□□□ -1.38
SCW4YGR279C SRC1Q03707 834 aa6.4□□□□□ -1.38
SCW4YGR279C SAS4Q04003 481 aa6.4□□□□□ -1.38
SCW4YGR279C RAD50P12753 1312 aa6.4□□□□□ -1.39
SCW4YGR279C AI2P03876 854 aa6.39□□□□□ -1.39
SCW4YGR279C KRE2P27809 442 aa6.39□□□□□ -1.39
SCW4YGR279C SLX5P32828 619 aaKnown RBP6.39□□□□□ -1.39
SCW4YGR279C OSH3P38713 996 aaKnown RBP6.39□□□□□ -1.39
SCW4YGR279C NMD2P38798 1089 aaKnown RBP6.39□□□□□ -1.39
SCW4YGR279C SHC1P39000 512 aa6.39□□□□□ -1.39
SCW4YGR279C CWH41P53008 833 aa6.39□□□□□ -1.39
SCW4YGR279C MLC1P53141 149 aa6.39□□□□□ -1.39
SCW4YGR279C FPK1P53739 893 aa6.39□□□□□ -1.39
SCW4YGR279C FCP1Q03254 732 aa6.39□□□□□ -1.39
SCW4YGR279C POM152P39685 1337 aa6.39□□□□□ -1.39
SCW4YGR279C SMY1P32364 656 aaKnown RBP6.38□□□□□ -1.39
SCW4YGR279C FRD1P32614 470 aaKnown RBP6.38□□□□□ -1.39
SCW4YGR279C YKU70P32807 602 aa6.38□□□□□ -1.39
SCW4YGR279C TIF4632P39936 914 aaKnown RBP6.38□□□□□ -1.39
SCW4YGR279C YGL242CP53066 181 aa6.38□□□□□ -1.39
SCW4YGR279C CYB2P00175 591 aa6.37□□□□□ -1.39
SCW4YGR279C RPN1P38764 993 aaKnown RBP6.37□□□□□ -1.39
SCW4YGR279C EAF6P47128 113 aa6.37□□□□□ -1.39
SCW4YGR279C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.37□□□□□ -1.39not detected
SCW4YGR279C TPM1P17536 199 aaKnown RBP6.36□□□□□ -1.39
SCW4YGR279C MGM1P32266 881 aa6.36□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms