RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W SRF1Q12516 437 aa6.31□□□□□ -1.4
PRP18YGR006W DLD3P39976 496 aaKnown RBP6.3□□□□□ -1.4
PRP18YGR006W PTK2P47116 818 aaKnown RBP6.3□□□□□ -1.4
PRP18YGR006W WTM2Q12206 467 aa6.3□□□□□ -1.4
PRP18YGR006W SRS2P12954 1174 aa6.29□□□□□ -1.4
PRP18YGR006W CWH41P53008 833 aa6.29□□□□□ -1.4
PRP18YGR006W PUN1Q06991 263 aa6.29□□□□□ -1.4
PRP18YGR006W NOP8Q08287 484 aaPredicted RBP6.28□□□□□ -1.4
PRP18YGR006W HAT1Q12341 374 aa6.28□□□□□ -1.4
PRP18YGR006W ARG82P07250 355 aa6.27□□□□□ -1.41
PRP18YGR006W SLD2P34252 453 aa6.27□□□□□ -1.41
PRP18YGR006W PNP1Q05788 311 aa6.27□□□□□ -1.41
PRP18YGR006W SSF1P38789 453 aaPredicted RBP6.26□□□□□ -1.41
PRP18YGR006W KAR5Q04746 504 aa6.26□□□□□ -1.41
PRP18YGR006W NGR1P32831 672 aaKnown RBP6.25□□□□□ -1.41
PRP18YGR006W TPS3P38426 1054 aaKnown RBP6.25□□□□□ -1.41
PRP18YGR006W SUM1P46676 1062 aa6.25□□□□□ -1.41
PRP18YGR006W GAR1P28007 205 aaKnown RBP6.24□□□□□ -1.41
PRP18YGR006W MET22P32179 357 aa6.24□□□□□ -1.41
PRP18YGR006W AAD14P42884 376 aa6.24□□□□□ -1.41
PRP18YGR006W ALD4P46367 519 aaKnown RBP6.24□□□□□ -1.41
PRP18YGR006W FUR4P05316 633 aaKnown RBP6.23□□□□□ -1.41
PRP18YGR006W MCM1P11746 286 aa6.23□□□□□ -1.41
PRP18YGR006W RRN6P32786 894 aa6.23□□□□□ -1.41
PRP18YGR006W YDR444WQ04093 687 aa6.23□□□□□ -1.41
PRP18YGR006W YPQ2Q06328 317 aa6.23□□□□□ -1.41
PRP18YGR006W SUV3P32580 737 aa6.22□□□□□ -1.41
PRP18YGR006W UTP7P40055 554 aaKnown RBP6.22□□□□□ -1.41
PRP18YGR006W DLD1P32891 587 aa6.21□□□□□ -1.42
PRP18YGR006W YBL113CQ7M4S9 792 aa6.21□□□□□ -1.42
PRP18YGR006W STM1P39015 273 aaKnown RBP6.2□□□□□ -1.42
PRP18YGR006W BOL3P39724 118 aa6.2□□□□□ -1.42
PRP18YGR006W NUP85P46673 744 aa6.2□□□□□ -1.42
PRP18YGR006W ATG1P53104 897 aa6.2□□□□□ -1.42
PRP18YGR006W LCB5Q06147 687 aaKnown RBP6.2□□□□□ -1.42
PRP18YGR006W GBP2P25555 427 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42not detected
PRP18YGR006W SCD5P34758 872 aa6.19□□□□□ -1.42
PRP18YGR006W ALA1P40825 983 aaKnown RBP6.19□□□□□ -1.42
PRP18YGR006W MSN5P52918 1224 aa6.19□□□□□ -1.42
PRP18YGR006W OPT2Q06593 877 aa6.19□□□□□ -1.42
PRP18YGR006W YBR197CP38306 217 aa6.18□□□□□ -1.42
PRP18YGR006W ERP5P38819 212 aa6.18□□□□□ -1.42
PRP18YGR006W LSC2P53312 427 aa6.18□□□□□ -1.42
PRP18YGR006W LSO1Q3E827 93 aa6.18□□□□□ -1.42
PRP18YGR006W TRL1P09880 827 aaKnown RBP6.17□□□□□ -1.42
PRP18YGR006W FOX2Q02207 900 aaKnown RBP6.17□□□□□ -1.42
PRP18YGR006W CAB1Q04430 367 aa6.17□□□□□ -1.42
PRP18YGR006W YLR346CQ06139 101 aa6.17□□□□□ -1.42
PRP18YGR006W ISC10P32645 267 aa6.16□□□□□ -1.42
PRP18YGR006W AHP1P38013 176 aaKnown RBP6.16□□□□□ -1.42
PRP18YGR006W HXT5P38695 592 aa6.16□□□□□ -1.42
PRP18YGR006W SSN3P39073 555 aa6.16□□□□□ -1.42
PRP18YGR006W VTC4P47075 721 aa6.16□□□□□ -1.42
PRP18YGR006W ACF4P47129 309 aa6.16□□□□□ -1.42
PRP18YGR006W YJR098CP47139 656 aa6.16□□□□□ -1.42
PRP18YGR006W TCB1Q12466 1186 aa6.16□□□□□ -1.42
PRP18YGR006W SEC20P28791 383 aa6.15□□□□□ -1.42
PRP18YGR006W GRS1P38088 690 aaKnown RBP6.15□□□□□ -1.42
PRP18YGR006W GLO3P38682 493 aaKnown RBP6.15□□□□□ -1.42
PRP18YGR006W UTP4Q06679 776 aaKnown RBP6.15□□□□□ -1.42
PRP18YGR006W DAL1P32375 460 aa6.14□□□□□ -1.43
PRP18YGR006W QDR1P40475 563 aa6.14□□□□□ -1.43
PRP18YGR006W SPR3P41901 512 aa6.14□□□□□ -1.43
PRP18YGR006W MDJ2P42834 146 aa6.14□□□□□ -1.43
PRP18YGR006W JJJ2P46997 583 aa6.14□□□□□ -1.43
PRP18YGR006W SEN54Q02825 467 aaPredicted RBP6.14□□□□□ -1.43
PRP18YGR006W MRPL33P20084 86 aa6.13□□□□□ -1.43
PRP18YGR006W YTA6P40328 754 aa6.13□□□□□ -1.43
PRP18YGR006W Q0182Q9ZZW1 134 aa6.13□□□□□ -1.43
PRP18YGR006W HEM3P28789 327 aa6.12□□□□□ -1.43
PRP18YGR006W GLY1P37303 387 aaKnown RBP6.12□□□□□ -1.43
PRP18YGR006W SCW11P53189 542 aa6.12□□□□□ -1.43
PRP18YGR006W UBP2Q01476 1272 aa6.12□□□□□ -1.43
PRP18YGR006W MSC6Q08818 692 aaKnown RBP6.12□□□□□ -1.43
PRP18YGR006W IRE1P32361 1115 aa6.11□□□□□ -1.43
PRP18YGR006W BOI1P38041 980 aaKnown RBP6.11□□□□□ -1.43
PRP18YGR006W YHL050CP38721 697 aa6.11□□□□□ -1.43
PRP18YGR006W YHR219WP38900 624 aa6.11□□□□□ -1.43
PRP18YGR006W APC11Q12157 165 aa6.11□□□□□ -1.43
PRP18YGR006W TY1A-BLQ12266 440 aa6.11□□□□□ -1.43
PRP18YGR006W MLF3P32047 452 aa6.1□□□□□ -1.43
PRP18YGR006W SLA1P32790 1244 aa6.1□□□□□ -1.43
PRP18YGR006W RGA1P39083 1007 aa6.1□□□□□ -1.43
PRP18YGR006W CAF120P53836 1060 aa6.1□□□□□ -1.43
PRP18YGR006W YNL165WP53891 406 aa6.1□□□□□ -1.43
PRP18YGR006W SHM1P37292 490 aaPredicted RBP6.09□□□□□ -1.43
PRP18YGR006W PPX1P38698 397 aa6.09□□□□□ -1.43
PRP18YGR006W RPS31P05759 152 aaKnown RBP6.08□□□□□ -1.44
PRP18YGR006W VMA3P25515 160 aa6.08□□□□□ -1.44
PRP18YGR006W LDH1P38139 375 aa6.08□□□□□ -1.44
PRP18YGR006W DYS1P38791 387 aa6.08□□□□□ -1.44
PRP18YGR006W UFD2P54860 961 aa6.08□□□□□ -1.44
PRP18YGR006W NUT2Q06213 157 aa6.08□□□□□ -1.44
PRP18YGR006W PDC6P26263 563 aaKnown RBP6.07□□□□□ -1.44
PRP18YGR006W IPL1P38991 367 aa6.07□□□□□ -1.44
PRP18YGR006W UBP15P50101 1230 aa6.07□□□□□ -1.44
PRP18YGR006W TRS120Q04183 1289 aa6.07□□□□□ -1.44
PRP18YGR006W YDL176WQ12027 708 aa6.07□□□□□ -1.44
PRP18YGR006W TY1A-DR3Q12441 440 aa6.07□□□□□ -1.44
PRP18YGR006W RPB10P22139 70 aa6.06□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms