RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W MTC1P47018 478 aaKnown RBP12.79□□□□□ -0.36
PRP18YGR006W DRS1P32892 752 aaKnown RBP12.44□□□□□ -0.42
PRP18YGR006W FAP1P53971 965 aa11.06□□□□□ -0.64
PRP18YGR006W BFR2Q06631 534 aaKnown RBP10.74□□□□□ -0.69
PRP18YGR006W DIP2Q12220 943 aaPredicted RBP10.73□□□□□ -0.69
PRP18YGR006W PRI1P10363 409 aa10.53□□□□□ -0.72
PRP18YGR006W ISW2Q08773 1120 aa10.51□□□□□ -0.73
PRP18YGR006W AVT3P36062 692 aa10.45□□□□□ -0.74
PRP18YGR006W RPG1P38249 964 aaKnown RBP10.41□□□□□ -0.74
PRP18YGR006W AAD16Q02895 342 aa10.4□□□□□ -0.74
PRP18YGR006W PRY3P47033 881 aa10.38□□□□□ -0.75
PRP18YGR006W RSE1Q04693 1361 aaKnown RBP10.25□□□□□ -0.77
PRP18YGR006W TFA1P36100 482 aa10.17□□□□□ -0.78
PRP18YGR006W TSR3Q12094 313 aaKnown RBP10.01□□□□□ -0.81
PRP18YGR006W RPL17AP05740 184 aaKnown RBP9.9□□□□□ -0.82
PRP18YGR006W RPL17BP46990 184 aaKnown RBP9.9□□□□□ -0.82
PRP18YGR006W REB1P21538 810 aa9.84□□□□□ -0.83
PRP18YGR006W YCK3P39962 524 aa9.75□□□□□ -0.85
PRP18YGR006W HAA1Q12753 694 aaKnown RBP9.69□□□□□ -0.86
PRP18YGR006W MRPL32P25348 183 aa9.6□□□□□ -0.87
PRP18YGR006W SPT21P35209 758 aa9.48□□□□□ -0.89
PRP18YGR006W YKR023WP36119 530 aaKnown RBP9.27□□□□□ -0.93
PRP18YGR006W RIM101P33400 625 aa9.23□□□□□ -0.93
PRP18YGR006W CDC27P38042 758 aa9.2□□□□□ -0.94
PRP18YGR006W HOP09932 586 aa9.12□□□□□ -0.95
PRP18YGR006W DCD1P06773 312 aa9.1□□□□□ -0.95
PRP18YGR006W TFC8Q12308 588 aa9.08□□□□□ -0.96
PRP18YGR006W YGL015CP33199 130 aa9.04□□□□□ -0.96
PRP18YGR006W OXP1P28273 1286 aa8.94□□□□□ -0.98
PRP18YGR006W MAP2P38174 421 aaKnown RBP8.87□□□□□ -0.99
PRP18YGR006W PTP3P40048 928 aa8.85□□□□□ -0.99
PRP18YGR006W YIL055CP40523 627 aaKnown RBP8.85□□□□□ -0.99
PRP18YGR006W UBP10P53874 792 aaPredicted RBP8.85□□□□□ -0.99
PRP18YGR006W YAH1Q12184 172 aaKnown RBP8.82□□□□□ -1
PRP18YGR006W BCH2P36122 765 aa8.81□□□□□ -1
PRP18YGR006W RQC2Q12532 1038 aaKnown RBP8.8□□□□□ -1
PRP18YGR006W SCY1P53009 804 aa8.79□□□□□ -1
PRP18YGR006W SSP1P38871 571 aa8.72□□□□□ -1.01
PRP18YGR006W RSM7P47150 247 aa8.69□□□□□ -1.02
PRP18YGR006W EPS1P40557 701 aa8.64□□□□□ -1.03
PRP18YGR006W YLR271WQ06152 274 aa8.64□□□□□ -1.03
PRP18YGR006W SLX5P32828 619 aaKnown RBP8.63□□□□□ -1.03
PRP18YGR006W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.6□□□□□ -1.03not detected
PRP18YGR006W AI2P03876 854 aa8.59□□□□□ -1.03
PRP18YGR006W BDF1P35817 686 aa8.58□□□□□ -1.04
PRP18YGR006W BBC1P47068 1157 aa8.57□□□□□ -1.04
PRP18YGR006W TIF4632P39936 914 aaKnown RBP8.5□□□□□ -1.05
PRP18YGR006W PSD2P53037 1138 aaKnown RBP8.45□□□□□ -1.06
PRP18YGR006W TGL3P40308 642 aa8.43□□□□□ -1.06
PRP18YGR006W MGA2P40578 1113 aa8.41□□□□□ -1.06
PRP18YGR006W DMA1P38823 416 aa8.38□□□□□ -1.07
PRP18YGR006W CST9Q06032 482 aa8.37□□□□□ -1.07
PRP18YGR006W MRM1P25270 412 aa8.31□□□□□ -1.08
PRP18YGR006W NSR1P27476 414 aaKnown RBP RIP-Chip data8.17□□□□□ -1.1not detected
PRP18YGR006W YAP5P40574 245 aa8.17□□□□□ -1.1
PRP18YGR006W YOR238WQ08634 303 aa8.15□□□□□ -1.1
PRP18YGR006W RTG3P38165 486 aa8.14□□□□□ -1.11
PRP18YGR006W RCR1P38212 213 aa8.13□□□□□ -1.11
PRP18YGR006W MST1P07236 462 aa8.1□□□□□ -1.11
PRP18YGR006W PIB1Q06651 286 aa8.1□□□□□ -1.11
PRP18YGR006W BUD31P25337 157 aaPredicted RBP8.09□□□□□ -1.11
PRP18YGR006W VPS29P38759 282 aa8.08□□□□□ -1.12
PRP18YGR006W YMR1P47147 688 aaKnown RBP RIP-Chip data8.06□□□□□ -1.12not detected
PRP18YGR006W UBP9P39967 754 aa8.05□□□□□ -1.12
PRP18YGR006W YFR006WP43590 535 aa8.03□□□□□ -1.12
PRP18YGR006W DBP1P24784 617 aaKnown RBP8.02□□□□□ -1.13
PRP18YGR006W STS1P38637 319 aa8.01□□□□□ -1.13
PRP18YGR006W GTT3P39996 337 aa8.01□□□□□ -1.13
PRP18YGR006W RAM2P29703 316 aa8□□□□□ -1.13
PRP18YGR006W YBL029C-AQ3E756 94 aa7.98□□□□□ -1.13
PRP18YGR006W WSC3Q12215 556 aa7.96□□□□□ -1.14
PRP18YGR006W SAS10Q12136 610 aaPredicted RBP7.94□□□□□ -1.14
PRP18YGR006W MAK11P20484 414 aaKnown RBP7.9□□□□□ -1.14
PRP18YGR006W VMA1P17255 1071 aaKnown RBP7.89□□□□□ -1.15
PRP18YGR006W VNX1P42839 908 aa7.88□□□□□ -1.15
PRP18YGR006W SET1P38827 1080 aaKnown RBP7.87□□□□□ -1.15
PRP18YGR006W MIF2P35201 549 aa7.84□□□□□ -1.15
PRP18YGR006W SPP1Q03012 353 aa7.84□□□□□ -1.15
PRP18YGR006W IFH1P39520 1085 aa7.82□□□□□ -1.16
PRP18YGR006W SET4P42948 560 aa7.82□□□□□ -1.16
PRP18YGR006W YOL036WQ08206 761 aa7.82□□□□□ -1.16
PRP18YGR006W COQ8P27697 501 aa7.79□□□□□ -1.16
PRP18YGR006W SAM3Q08986 587 aa7.79□□□□□ -1.16
PRP18YGR006W SIS1P25294 352 aaKnown RBP7.78□□□□□ -1.16
PRP18YGR006W EDS1P38073 919 aa7.78□□□□□ -1.16
PRP18YGR006W TIF11P38912 153 aaKnown RBP7.78□□□□□ -1.16
PRP18YGR006W YPR148CQ06523 435 aa7.77□□□□□ -1.17
PRP18YGR006W NOP53Q12080 455 aaKnown RBP7.77□□□□□ -1.17
PRP18YGR006W MSB4Q12317 492 aa7.77□□□□□ -1.17
PRP18YGR006W ULI1P43604 169 aa7.74□□□□□ -1.17
PRP18YGR006W CKB1P43639 278 aa7.74□□□□□ -1.17
PRP18YGR006W GYP5Q12344 894 aa7.74□□□□□ -1.17
PRP18YGR006W PTC3P34221 468 aaKnown RBP7.73□□□□□ -1.17
PRP18YGR006W LEU3P08638 886 aa7.72□□□□□ -1.17
PRP18YGR006W VPS70P47161 811 aa7.72□□□□□ -1.17
PRP18YGR006W EAP1P36041 632 aaKnown RBP7.71□□□□□ -1.18
PRP18YGR006W GRE2Q12068 342 aaKnown RBP7.71□□□□□ -1.18
PRP18YGR006W TRP5P00931 707 aaKnown RBP7.69□□□□□ -1.18
PRP18YGR006W DCW1P36091 449 aa7.69□□□□□ -1.18
PRP18YGR006W LDB19Q12502 818 aa7.68□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 47.4 ms