RNA–Protein interactions for RNA: YGL225W

VRG4, Transcript of Golgi GDP-mannose transporter, yeast

Gene VRG4, Length 1,014 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VRG4	YGL225W	SMY1	P32364	656 aa	Known RBP	11.4	□□□□□ -0.58
VRG4	YGL225W	NUP133	P36161	1157 aa		11.4	□□□□□ -0.58
VRG4	YGL225W	SET1	P38827	1080 aa	Known RBP	11.4	□□□□□ -0.58
VRG4	YGL225W	ERO1	Q03103	563 aa		11.4	□□□□□ -0.58
VRG4	YGL225W	PKH1	Q03407	766 aa		11.4	□□□□□ -0.58
VRG4	YGL225W	YPP1	P46951	817 aa		11.39	□□□□□ -0.59
VRG4	YGL225W	SYF1	Q04048	859 aa	Predicted RBP	11.38	□□□□□ -0.59
VRG4	YGL225W	UBP16	Q02863	499 aa		11.37	□□□□□ -0.59
VRG4	YGL225W	NOP8	Q08287	484 aa	Predicted RBP	11.37	□□□□□ -0.59
VRG4	YGL225W	YIL092W	P40497	633 aa		11.36	□□□□□ -0.59
VRG4	YGL225W	FCP1	Q03254	732 aa		11.36	□□□□□ -0.59
VRG4	YGL225W	ITC1	P53125	1264 aa		11.35	□□□□□ -0.59
VRG4	YGL225W	YGR122W	P53272	402 aa		11.35	□□□□□ -0.59
VRG4	YGL225W	RPS19A	P07280	144 aa	Known RBP	11.34	□□□□□ -0.59
VRG4	YGL225W	RPS19B	P07281	144 aa	Predicted RBP	11.34	□□□□□ -0.59
VRG4	YGL225W	RAD24	P32641	659 aa		11.34	□□□□□ -0.59
VRG4	YGL225W	CSI1	Q04368	295 aa		11.34	□□□□□ -0.59
VRG4	YGL225W	RPS9B	P05755	195 aa	Known RBP	11.33	□□□□□ -0.6
VRG4	YGL225W	SAC3	P46674	1301 aa		11.33	□□□□□ -0.6
VRG4	YGL225W	RAD2	P07276	1031 aa		11.32	□□□□□ -0.6
VRG4	YGL225W	CAF20	P12962	161 aa	Known RBP	11.32	□□□□□ -0.6
VRG4	YGL225W	FRD1	P32614	470 aa	Known RBP	11.32	□□□□□ -0.6
VRG4	YGL225W	UBP12	P39538	1254 aa		11.32	□□□□□ -0.6
VRG4	YGL225W	BOI2	P39969	1040 aa		11.32	□□□□□ -0.6
VRG4	YGL225W	MTC5	Q03897	1148 aa		11.32	□□□□□ -0.6
VRG4	YGL225W	DAL5	P15365	543 aa		11.31	□□□□□ -0.6
VRG4	YGL225W	SWC3	P31376	625 aa		11.31	□□□□□ -0.6
VRG4	YGL225W	RPN1	P38764	993 aa	Known RBP	11.31	□□□□□ -0.6
VRG4	YGL225W	SAS4	Q04003	481 aa		11.31	□□□□□ -0.6
VRG4	YGL225W	PSH1	Q12161	406 aa		11.31	□□□□□ -0.6
VRG4	YGL225W	GRX6	Q12438	231 aa		11.31	□□□□□ -0.6
VRG4	YGL225W	PMD1	P32634	1753 aa		11.31	□□□□□ -0.6
VRG4	YGL225W	SUP35	P05453	685 aa	Known RBP	11.29	□□□□□ -0.6
VRG4	YGL225W	YKU70	P32807	602 aa		11.29	□□□□□ -0.6
VRG4	YGL225W	ICL1	P28240	557 aa	Predicted RBP	11.28	□□□□□ -0.6
VRG4	YGL225W	SHC1	P39000	512 aa		11.27	□□□□□ -0.61
VRG4	YGL225W	FPK1	P53739	893 aa		11.27	□□□□□ -0.61
VRG4	YGL225W	SQS1	P53866	767 aa	Known RBP	11.27	□□□□□ -0.61
VRG4	YGL225W	DPH6	Q12429	685 aa		11.27	□□□□□ -0.61
VRG4	YGL225W	TRP5	P00931	707 aa	Known RBP	11.26	□□□□□ -0.61
VRG4	YGL225W	ICP55	P40051	511 aa		11.26	□□□□□ -0.61
VRG4	YGL225W	RET1	P22276	1149 aa	Known RBP	11.24	□□□□□ -0.61
VRG4	YGL225W	YNG2	P38806	282 aa	Known RBP	11.24	□□□□□ -0.61
VRG4	YGL225W	HGH1	P48362	394 aa	Known RBP	11.24	□□□□□ -0.61
VRG4	YGL225W	TOP1	P04786	769 aa		11.23	□□□□□ -0.61
VRG4	YGL225W	KRE2	P27809	442 aa		11.23	□□□□□ -0.61
VRG4	YGL225W	UBX2	Q04228	584 aa		11.23	□□□□□ -0.61
VRG4	YGL225W	ATG20	Q07528	640 aa		11.23	□□□□□ -0.61
VRG4	YGL225W	HXT10	P43581	546 aa		11.22	□□□□□ -0.61
VRG4	YGL225W	DIP2	Q12220	943 aa	Predicted RBP	11.22	□□□□□ -0.61
VRG4	YGL225W	SNU66	Q12420	587 aa	Predicted RBP	11.22	□□□□□ -0.61
VRG4	YGL225W	MGM1	P32266	881 aa		11.21	□□□□□ -0.61
VRG4	YGL225W	GCD7	P32502	381 aa	Predicted RBP	11.21	□□□□□ -0.61
VRG4	YGL225W	NGR1	P32831	672 aa	Known RBP	11.21	□□□□□ -0.61
VRG4	YGL225W	THI3	Q07471	609 aa		11.21	□□□□□ -0.61
VRG4	YGL225W	FUN12	P39730	1002 aa	Known RBP	11.2	□□□□□ -0.62
VRG4	YGL225W	DPL1	Q05567	589 aa		11.2	□□□□□ -0.62
VRG4	YGL225W	ADR1	P07248	1323 aa		11.19	□□□□□ -0.62
VRG4	YGL225W	SSF1	P38789	453 aa	Predicted RBP	11.19	□□□□□ -0.62
VRG4	YGL225W	SPL2	P38839	148 aa		11.19	□□□□□ -0.62
VRG4	YGL225W	POL32	P47110	350 aa		11.19	□□□□□ -0.62
VRG4	YGL225W	SPO1	P53541	631 aa		11.19	□□□□□ -0.62
VRG4	YGL225W	NUG1	P40010	520 aa	Known RBP	11.18	□□□□□ -0.62
VRG4	YGL225W	SRC1	Q03707	834 aa		11.18	□□□□□ -0.62
VRG4	YGL225W	PUF6	Q04373	656 aa	Known RBP	11.18	□□□□□ -0.62
VRG4	YGL225W	HKR1	P41809	1802 aa		11.17	□□□□□ -0.62
VRG4	YGL225W	TIF4632	P39936	914 aa	Known RBP	11.17	□□□□□ -0.62
VRG4	YGL225W	SET4	P42948	560 aa		11.17	□□□□□ -0.62
VRG4	YGL225W	RPT4	P53549	437 aa	Known RBP	11.17	□□□□□ -0.62
VRG4	YGL225W	MSM1	P22438	575 aa		11.16	□□□□□ -0.62
VRG4	YGL225W	SLI15	P38283	698 aa		11.16	□□□□□ -0.62
VRG4	YGL225W	GYP5	Q12344	894 aa		11.16	□□□□□ -0.62
VRG4	YGL225W	ILV3	P39522	585 aa	Known RBP	11.15	□□□□□ -0.62
VRG4	YGL225W	TFA1	P36100	482 aa		11.14	□□□□□ -0.63
VRG4	YGL225W	POM152	P39685	1337 aa		11.13	□□□□□ -0.63
VRG4	YGL225W	SEC18	P18759	758 aa	Known RBP	11.13	□□□□□ -0.63
VRG4	YGL225W	LCB1	P25045	558 aa	Known RBP	11.13	□□□□□ -0.63
VRG4	YGL225W	GAS5	Q08193	484 aa		11.13	□□□□□ -0.63
VRG4	YGL225W	FAS2	P19097	1887 aa	Known RBP	11.12	□□□□□ -0.63
VRG4	YGL225W	RTG2	P32608	588 aa	Known RBP	11.12	□□□□□ -0.63
VRG4	YGL225W	IRC4	Q03036	179 aa		11.12	□□□□□ -0.63
VRG4	YGL225W	PSF3	Q12146	194 aa		11.12	□□□□□ -0.63
VRG4	YGL225W	RRG1	Q12167	365 aa	Predicted RBP	11.12	□□□□□ -0.63
VRG4	YGL225W	YLR278C	Q05854	1341 aa		11.11	□□□□□ -0.63
VRG4	YGL225W	FIG2	P25653	1609 aa		11.11	□□□□□ -0.63
VRG4	YGL225W	GLC3	P32775	704 aa		11.11	□□□□□ -0.63
VRG4	YGL225W	PEX21	P50091	288 aa		11.11	□□□□□ -0.63
VRG4	YGL225W	PRP42	Q03776	544 aa	Known RBP	11.11	□□□□□ -0.63
VRG4	YGL225W	NCB2	Q92317	146 aa		11.11	□□□□□ -0.63
VRG4	YGL225W	CRF1	Q04930	467 aa		11.1	□□□□□ -0.63
VRG4	YGL225W	PUS5	Q06244	254 aa		11.1	□□□□□ -0.63
VRG4	YGL225W	THS1	P04801	734 aa	Known RBP	11.09	□□□□□ -0.63
VRG4	YGL225W	GLO3	P38682	493 aa	Known RBP	11.09	□□□□□ -0.63
VRG4	YGL225W	DUR1,2	P32528	1835 aa	Known RBP	11.08	□□□□□ -0.64
VRG4	YGL225W	AFG2	P32794	780 aa		11.08	□□□□□ -0.64
VRG4	YGL225W	TIM50	Q02776	476 aa		11.08	□□□□□ -0.64
VRG4	YGL225W	AI2	P03876	854 aa		11.07	□□□□□ -0.64
VRG4	YGL225W	PIF1	P07271	859 aa		11.07	□□□□□ -0.64
VRG4	YGL225W	SSA4	P22202	642 aa	Known RBP	11.07	□□□□□ -0.64
VRG4	YGL225W	SLA1	P32790	1244 aa		11.07	□□□□□ -0.64

Retrieved 100 of 5,963 RNA–protein pairs in 78.7 ms