RNA–Protein interactions for RNA: YER003C

PMI40, Transcript of Mannose-6-phosphate isomerase, yeast

Gene PMI40, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMI40	YER003C	SCW11	P53189	542 aa		5.27	□□□□□ -1.57
PMI40	YER003C	ISU1	Q03020	165 aa		5.27	□□□□□ -1.57
PMI40	YER003C	TY1A-BL	Q12266	440 aa		5.27	□□□□□ -1.57
PMI40	YER003C	HAP4	P14064	554 aa		5.26	□□□□□ -1.57
PMI40	YER003C	PHO87	P25360	923 aa		5.26	□□□□□ -1.57
PMI40	YER003C	SEC20	P28791	383 aa		5.26	□□□□□ -1.57
PMI40	YER003C	UBX7	P38349	436 aa		5.26	□□□□□ -1.57
PMI40	YER003C	SPT2	P06843	333 aa	Predicted RBP	5.25	□□□□□ -1.57
PMI40	YER003C	MIP1	P15801	1254 aa		5.25	□□□□□ -1.57
PMI40	YER003C	ASF1	P32447	279 aa		5.25	□□□□□ -1.57
PMI40	YER003C	RRN6	P32786	894 aa		5.25	□□□□□ -1.57
PMI40	YER003C	HAL5	P38970	855 aa	Known RBP	5.25	□□□□□ -1.57
PMI40	YER003C	NUP85	P46673	744 aa		5.25	□□□□□ -1.57
PMI40	YER003C	ORC1	P54784	914 aa	Predicted RBP	5.25	□□□□□ -1.57
PMI40	YER003C	CWC15	Q03772	175 aa	Known RBP	5.25	□□□□□ -1.57
PMI40	YER003C	PUF6	Q04373	656 aa	Known RBP	5.25	□□□□□ -1.57
PMI40	YER003C	YBL113C	Q7M4S9	792 aa		5.25	□□□□□ -1.57
PMI40	YER003C	TSC13	Q99190	310 aa		5.25	□□□□□ -1.57
PMI40	YER003C	STE6	P12866	1290 aa		5.24	□□□□□ -1.57
PMI40	YER003C	UTR2	P32623	467 aa		5.24	□□□□□ -1.57
PMI40	YER003C	PAM1	P37304	830 aa	Known RBP	5.24	□□□□□ -1.57
PMI40	YER003C	TBS1	P38114	1094 aa		5.24	□□□□□ -1.57
PMI40	YER003C	DFG5	Q05031	458 aa		5.24	□□□□□ -1.57
PMI40	YER003C	HDA3	Q06623	655 aa		5.24	□□□□□ -1.57
PMI40	YER003C	BDS1	Q08347	646 aa		5.24	□□□□□ -1.57
PMI40	YER003C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.24	□□□□□ -1.57	not detected
PMI40	YER003C	ERP5	P38819	212 aa		5.23	□□□□□ -1.57
PMI40	YER003C	MET10	P39692	1035 aa		5.23	□□□□□ -1.57
PMI40	YER003C	AIM9	P40053	627 aa	Known RBP	5.23	□□□□□ -1.57
PMI40	YER003C	GAS4	Q08271	471 aa		5.23	□□□□□ -1.57
PMI40	YER003C	MSC6	Q08818	692 aa	Known RBP	5.23	□□□□□ -1.57
PMI40	YER003C	IPL1	P38991	367 aa		5.22	□□□□□ -1.57
PMI40	YER003C	ARG82	P07250	355 aa		5.21	□□□□□ -1.58
PMI40	YER003C	TRL1	P09880	827 aa	Known RBP	5.21	□□□□□ -1.58
PMI40	YER003C	DAT1	P13483	248 aa	Known RBP	5.21	□□□□□ -1.58
PMI40	YER003C	PDI1	P17967	522 aa	Known RBP	5.21	□□□□□ -1.58
PMI40	YER003C	DLD3	P39976	496 aa	Known RBP	5.21	□□□□□ -1.58
PMI40	YER003C	ACS2	P52910	683 aa	Known RBP	5.21	□□□□□ -1.58
PMI40	YER003C	KAR5	Q04746	504 aa		5.21	□□□□□ -1.58
PMI40	YER003C	TPS3	P38426	1054 aa	Known RBP	5.2	□□□□□ -1.58
PMI40	YER003C	ROM1	P53046	1155 aa		5.2	□□□□□ -1.58
PMI40	YER003C	WTM2	Q12206	467 aa		5.2	□□□□□ -1.58
PMI40	YER003C	DLD1	P32891	587 aa		5.19	□□□□□ -1.58
PMI40	YER003C	NTH2	P35172	780 aa		5.19	□□□□□ -1.58
PMI40	YER003C	MDJ2	P42834	146 aa		5.19	□□□□□ -1.58
PMI40	YER003C	PNP1	Q05788	311 aa		5.19	□□□□□ -1.58
PMI40	YER003C	RPS6A	P0CX37	236 aa	Known RBP	5.18	□□□□□ -1.58
PMI40	YER003C	RPS6B	P0CX38	236 aa	Predicted RBP	5.18	□□□□□ -1.58
PMI40	YER003C	SRS2	P12954	1174 aa		5.18	□□□□□ -1.58
PMI40	YER003C	VAN1	P23642	535 aa		5.18	□□□□□ -1.58
PMI40	YER003C	AAD14	P42884	376 aa		5.18	□□□□□ -1.58
PMI40	YER003C	ATG1	P53104	897 aa		5.18	□□□□□ -1.58
PMI40	YER003C	SWI5	P08153	709 aa		5.17	□□□□□ -1.58
PMI40	YER003C	UBP1	P25037	809 aa		5.17	□□□□□ -1.58
PMI40	YER003C	PPX1	P38698	397 aa		5.17	□□□□□ -1.58
PMI40	YER003C	YHL050C	P38721	697 aa		5.17	□□□□□ -1.58
PMI40	YER003C	YHR219W	P38900	624 aa		5.17	□□□□□ -1.58
PMI40	YER003C	LSB3	P43603	459 aa	Known RBP	5.17	□□□□□ -1.58
PMI40	YER003C	PUN1	Q06991	263 aa		5.17	□□□□□ -1.58
PMI40	YER003C	TRS33	Q99394	268 aa		5.17	□□□□□ -1.58
PMI40	YER003C	CYT1	P07143	309 aa		5.16	□□□□□ -1.58
PMI40	YER003C	GRS1	P38088	690 aa	Known RBP	5.16	□□□□□ -1.58
PMI40	YER003C	ROG3	P43602	733 aa		5.16	□□□□□ -1.58
PMI40	YER003C	ACF4	P47129	309 aa		5.16	□□□□□ -1.58
PMI40	YER003C	LSC2	P53312	427 aa		5.16	□□□□□ -1.58
PMI40	YER003C	RRP15	Q06511	250 aa	Predicted RBP	5.16	□□□□□ -1.58
PMI40	YER003C	TCB1	Q12466	1186 aa		5.16	□□□□□ -1.58
PMI40	YER003C	FUR4	P05316	633 aa	Known RBP	5.15	□□□□□ -1.59
PMI40	YER003C	BOL3	P39724	118 aa		5.15	□□□□□ -1.59
PMI40	YER003C	YJR098C	P47139	656 aa		5.15	□□□□□ -1.59
PMI40	YER003C	CWH41	P53008	833 aa		5.15	□□□□□ -1.59
PMI40	YER003C	MCM1	P11746	286 aa		5.14	□□□□□ -1.59
PMI40	YER003C	MDJ1	P35191	511 aa		5.14	□□□□□ -1.59
PMI40	YER003C	ICP55	P40051	511 aa		5.14	□□□□□ -1.59
PMI40	YER003C	SUM1	P46676	1062 aa		5.14	□□□□□ -1.59
PMI40	YER003C	POL32	P47110	350 aa		5.14	□□□□□ -1.59
PMI40	YER003C	ALD2	P47771	506 aa		5.14	□□□□□ -1.59
PMI40	YER003C	SVF1	Q05515	481 aa		5.14	□□□□□ -1.59
PMI40	YER003C	PUS1	Q12211	544 aa	Known RBP	5.14	□□□□□ -1.59
PMI40	YER003C	UTP7	P40055	554 aa	Known RBP	5.13	□□□□□ -1.59
PMI40	YER003C	UBP2	Q01476	1272 aa		5.13	□□□□□ -1.59
PMI40	YER003C	CCP1	P00431	361 aa		5.12	□□□□□ -1.59
PMI40	YER003C	ATE1	P16639	503 aa		5.12	□□□□□ -1.59
PMI40	YER003C	NGR1	P32831	672 aa	Known RBP	5.12	□□□□□ -1.59
PMI40	YER003C	QDR1	P40475	563 aa		5.12	□□□□□ -1.59
PMI40	YER003C	MSN5	P52918	1224 aa		5.12	□□□□□ -1.59
PMI40	YER003C	TY1A-MR1	Q04215	440 aa		5.12	□□□□□ -1.59
PMI40	YER003C	WHI5	Q12416	295 aa		5.12	□□□□□ -1.59
PMI40	YER003C	LSO1	Q3E827	93 aa		5.12	□□□□□ -1.59
PMI40	YER003C	GLO3	P38682	493 aa	Known RBP	5.11	□□□□□ -1.59
PMI40	YER003C	ALA1	P40825	983 aa	Known RBP	5.11	□□□□□ -1.59
PMI40	YER003C	ALD4	P46367	519 aa	Known RBP	5.11	□□□□□ -1.59
PMI40	YER003C	VTC4	P47075	721 aa		5.11	□□□□□ -1.59
PMI40	YER003C	NUT2	Q06213	157 aa		5.11	□□□□□ -1.59
PMI40	YER003C	YPQ2	Q06328	317 aa		5.11	□□□□□ -1.59
PMI40	YER003C	THI12	P42883	340 aa		5.1	□□□□□ -1.59
PMI40	YER003C	THI5	P43534	340 aa		5.1	□□□□□ -1.59
PMI40	YER003C	THI11	P47183	340 aa		5.1	□□□□□ -1.59
PMI40	YER003C	THI13	Q07748	340 aa		5.1	□□□□□ -1.59
PMI40	YER003C	SUV3	P32580	737 aa		5.09	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms