RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W CDC31P06704 161 aaKnown RBP2.3□□□□□ -2.04
USO1YDL058W SSB1P11484 613 aaKnown RBP2.3□□□□□ -2.04
USO1YDL058W KRE2P27809 442 aa2.3□□□□□ -2.04
USO1YDL058W MRP4P32902 394 aa2.3□□□□□ -2.04
USO1YDL058W MET10P39692 1035 aa2.3□□□□□ -2.04
USO1YDL058W SSB2P40150 613 aaKnown RBP2.3□□□□□ -2.04
USO1YDL058W LOC1P43586 204 aaPredicted RBP2.3□□□□□ -2.04
USO1YDL058W ATG1P53104 897 aa2.3□□□□□ -2.04
USO1YDL058W UTP4Q06679 776 aaKnown RBP2.3□□□□□ -2.04
USO1YDL058W ARD1P07347 238 aaPredicted RBP2.3□□□□□ -2.04
USO1YDL058W PET111P08468 800 aa2.3□□□□□ -2.04
USO1YDL058W CAJ1P39101 391 aa2.3□□□□□ -2.04
USO1YDL058W CTF4Q01454 927 aa2.3□□□□□ -2.04
USO1YDL058W ENT2Q05785 613 aa2.3□□□□□ -2.04
USO1YDL058W SSK2P53599 1579 aa2.3□□□□□ -2.04
USO1YDL058W SEM1O94742 89 aa2.3□□□□□ -2.04
USO1YDL058W KIN1P13185 1064 aa2.3□□□□□ -2.04
USO1YDL058W PRP2P20095 876 aaPredicted RBP2.3□□□□□ -2.04
USO1YDL058W XRS2P33301 854 aa2.3□□□□□ -2.04
USO1YDL058W RIA1P53893 1110 aa2.3□□□□□ -2.04
USO1YDL058W RRB1Q04225 511 aaKnown RBP2.3□□□□□ -2.04
USO1YDL058W LCB5Q06147 687 aaKnown RBP2.3□□□□□ -2.04
USO1YDL058W COX6P00427 148 aa2.29□□□□□ -2.04
USO1YDL058W MCM1P11746 286 aa2.29□□□□□ -2.04
USO1YDL058W MRP7P12687 371 aa2.29□□□□□ -2.04
USO1YDL058W PWP1P21304 576 aaKnown RBP2.29□□□□□ -2.04
USO1YDL058W SLX8P40072 274 aa2.29□□□□□ -2.04
USO1YDL058W ALA1P40825 983 aaKnown RBP2.29□□□□□ -2.04
USO1YDL058W SWI3P32591 825 aa2.29□□□□□ -2.04
USO1YDL058W TAN1P53072 289 aaPredicted RBP2.29□□□□□ -2.04
USO1YDL058W PIL1P53252 339 aaKnown RBP2.29□□□□□ -2.04
USO1YDL058W ZIP1P31111 875 aa2.29□□□□□ -2.04
USO1YDL058W RSM7P47150 247 aa2.29□□□□□ -2.04
USO1YDL058W UGO1Q03327 502 aa2.29□□□□□ -2.04
USO1YDL058W TMA46Q12000 345 aaKnown RBP2.29□□□□□ -2.04
USO1YDL058W PEP1P32319 1579 aa2.29□□□□□ -2.04
USO1YDL058W UIP5P36137 443 aa2.29□□□□□ -2.04
USO1YDL058W PBY1P38254 753 aa2.29□□□□□ -2.04
USO1YDL058W PHM8P40025 321 aa2.29□□□□□ -2.04
USO1YDL058W RRP9Q06506 573 aaKnown RBP2.29□□□□□ -2.04
USO1YDL058W HSL1P34244 1518 aa2.29□□□□□ -2.04
USO1YDL058W BIK1P11709 440 aa2.28□□□□□ -2.04
USO1YDL058W PET123P17558 318 aa2.28□□□□□ -2.04
USO1YDL058W CDC60P26637 1090 aaKnown RBP2.28□□□□□ -2.04
USO1YDL058W PRP45P28004 379 aaPredicted RBP2.28□□□□□ -2.04
USO1YDL058W YBL028CP38202 106 aa2.28□□□□□ -2.04
USO1YDL058W YHR131CP38835 850 aa2.28□□□□□ -2.04
USO1YDL058W CNN1P43618 361 aa2.28□□□□□ -2.04
USO1YDL058W MTR4P47047 1073 aaKnown RBP2.28□□□□□ -2.04
USO1YDL058W YJR107WP47145 328 aa2.28□□□□□ -2.04
USO1YDL058W SEN54Q02825 467 aaPredicted RBP2.28□□□□□ -2.04
USO1YDL058W ERB1Q04660 807 aaKnown RBP2.28□□□□□ -2.04
USO1YDL058W TFB4Q12004 338 aa2.28□□□□□ -2.04
USO1YDL058W DAL1P32375 460 aa2.28□□□□□ -2.04
USO1YDL058W NGG1P32494 702 aa2.28□□□□□ -2.04
USO1YDL058W NIP100P33420 868 aa2.28□□□□□ -2.04
USO1YDL058W PUS4P48567 403 aaKnown RBP2.28□□□□□ -2.04
USO1YDL058W TPO2P53283 614 aa2.28□□□□□ -2.04
USO1YDL058W SPO1P53541 631 aa2.28□□□□□ -2.04
USO1YDL058W UBP10P53874 792 aaPredicted RBP2.28□□□□□ -2.04
USO1YDL058W YDL121CQ07541 149 aa2.28□□□□□ -2.04
USO1YDL058W MPC54Q08550 464 aa2.28□□□□□ -2.04
USO1YDL058W MED2Q12124 431 aa2.28□□□□□ -2.04
USO1YDL058W SUP35P05453 685 aaKnown RBP2.28□□□□□ -2.04
USO1YDL058W MSS116P15424 664 aaKnown RBP2.28□□□□□ -2.04
USO1YDL058W CDC23P16522 626 aa2.28□□□□□ -2.04
USO1YDL058W APN1P22936 367 aa2.28□□□□□ -2.04
USO1YDL058W RPC19P28000 142 aaKnown RBP2.28□□□□□ -2.04
USO1YDL058W SEC8P32855 1065 aa2.28□□□□□ -2.04
USO1YDL058W COY1P34237 679 aa2.28□□□□□ -2.04
USO1YDL058W SPC42P36094 363 aa2.28□□□□□ -2.04
USO1YDL058W PIM1P36775 1133 aa2.28□□□□□ -2.04
USO1YDL058W MGE1P38523 228 aa2.28□□□□□ -2.04
USO1YDL058W YLF2P38746 405 aa2.28□□□□□ -2.04
USO1YDL058W UTP18P40362 594 aaPredicted RBP2.28□□□□□ -2.04
USO1YDL058W UFD2P54860 961 aa2.28□□□□□ -2.04
USO1YDL058W GSF2Q04697 403 aaKnown RBP2.28□□□□□ -2.04
USO1YDL058W APL4Q12028 832 aa2.28□□□□□ -2.04
USO1YDL058W IOC2Q12072 812 aa2.28□□□□□ -2.04
USO1YDL058W HCA4P20448 770 aaKnown RBP2.28□□□□□ -2.04
USO1YDL058W MSH3P25336 1018 aa2.28□□□□□ -2.04
USO1YDL058W ANP1P32629 500 aa2.28□□□□□ -2.04
USO1YDL058W TOM20P35180 183 aa2.28□□□□□ -2.04
USO1YDL058W NPR3P38742 1146 aa2.28□□□□□ -2.04
USO1YDL058W MON1P53129 644 aa2.28□□□□□ -2.04
USO1YDL058W RNT1Q02555 471 aa2.28□□□□□ -2.04
USO1YDL058W MCD1Q12158 566 aa2.28□□□□□ -2.04
USO1YDL058W TFC8Q12308 588 aa2.28□□□□□ -2.04
USO1YDL058W LSO1Q3E827 93 aa2.28□□□□□ -2.04
USO1YDL058W KCC4P25389 1037 aa2.27□□□□□ -2.05
USO1YDL058W SPC110P32380 944 aa2.27□□□□□ -2.05
USO1YDL058W SLA1P32790 1244 aa2.27□□□□□ -2.05
USO1YDL058W TIF5P38431 405 aaKnown RBP2.27□□□□□ -2.05
USO1YDL058W CIC1P38779 376 aaKnown RBP2.27□□□□□ -2.05
USO1YDL058W GEM1P39722 662 aa2.27□□□□□ -2.05
USO1YDL058W RPL34BP40525 121 aaKnown RBP2.27□□□□□ -2.05
USO1YDL058W IOC3P43596 787 aa2.27□□□□□ -2.05
USO1YDL058W STU2P46675 888 aa2.27□□□□□ -2.05
USO1YDL058W SMC3P47037 1230 aa2.27□□□□□ -2.05
USO1YDL058W RAT1Q02792 1006 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms