RNA–Protein interactions for RNA: YDL041W

YDL041W, Transcript of Dubious open reading frame, yeast

Gene YDL041W, Length 354 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL041W	YDL041W	YLR346C	Q06139	101 aa		4.02	□□□□□ -1.77
YDL041W	YDL041W	VAN1	P23642	535 aa		4.01	□□□□□ -1.77
YDL041W	YDL041W	DLD1	P32891	587 aa		4.01	□□□□□ -1.77
YDL041W	YDL041W	UTP7	P40055	554 aa	Known RBP	4.01	□□□□□ -1.77
YDL041W	YDL041W	ROM1	P53046	1155 aa		4.01	□□□□□ -1.77
YDL041W	YDL041W	TRS33	Q99394	268 aa		4.01	□□□□□ -1.77
YDL041W	YDL041W	UBP1	P25037	809 aa		4	□□□□□ -1.77
YDL041W	YDL041W	GEF1	P37020	779 aa		4	□□□□□ -1.77
YDL041W	YDL041W	SUM1	P46676	1062 aa		4	□□□□□ -1.77
YDL041W	YDL041W	INO80	P53115	1489 aa		3.99	□□□□□ -1.77
YDL041W	YDL041W	AHP1	P38013	176 aa	Known RBP	3.99	□□□□□ -1.77
YDL041W	YDL041W	ALA1	P40825	983 aa	Known RBP	3.99	□□□□□ -1.77
YDL041W	YDL041W	YJR098C	P47139	656 aa		3.99	□□□□□ -1.77
YDL041W	YDL041W	CWH41	P53008	833 aa		3.99	□□□□□ -1.77
YDL041W	YDL041W	UBP2	Q01476	1272 aa		3.99	□□□□□ -1.77
YDL041W	YDL041W	PUF6	Q04373	656 aa	Known RBP	3.99	□□□□□ -1.77
YDL041W	YDL041W	MCM1	P11746	286 aa		3.98	□□□□□ -1.77
YDL041W	YDL041W	VTC4	P47075	721 aa		3.98	□□□□□ -1.77
YDL041W	YDL041W	MSN5	P52918	1224 aa		3.98	□□□□□ -1.77
YDL041W	YDL041W	YDR444W	Q04093	687 aa		3.98	□□□□□ -1.77
YDL041W	YDL041W	LCB5	Q06147	687 aa	Known RBP	3.97	□□□□□ -1.77
YDL041W	YDL041W	YPQ2	Q06328	317 aa		3.97	□□□□□ -1.77
YDL041W	YDL041W	OPT2	Q06593	877 aa		3.97	□□□□□ -1.77
YDL041W	YDL041W	SRS2	P12954	1174 aa		3.96	□□□□□ -1.78
YDL041W	YDL041W	MET22	P32179	357 aa		3.96	□□□□□ -1.78
YDL041W	YDL041W	CDC3	P32457	520 aa	Known RBP	3.96	□□□□□ -1.78
YDL041W	YDL041W	NGR1	P32831	672 aa	Known RBP	3.96	□□□□□ -1.78
YDL041W	YDL041W	GLY1	P37303	387 aa	Known RBP	3.96	□□□□□ -1.78
YDL041W	YDL041W	SCW11	P53189	542 aa		3.96	□□□□□ -1.78
YDL041W	YDL041W	PUN1	Q06991	263 aa		3.96	□□□□□ -1.78
YDL041W	YDL041W	TCB1	Q12466	1186 aa		3.96	□□□□□ -1.78
YDL041W	YDL041W	DAL1	P32375	460 aa		3.95	□□□□□ -1.78
YDL041W	YDL041W	SSN3	P39073	555 aa		3.95	□□□□□ -1.78
YDL041W	YDL041W	JJJ2	P46997	583 aa		3.95	□□□□□ -1.78
YDL041W	YDL041W	SCD5	P34758	872 aa		3.94	□□□□□ -1.78
YDL041W	YDL041W	YTA6	P40328	754 aa		3.94	□□□□□ -1.78
YDL041W	YDL041W	ALD4	P46367	519 aa	Known RBP	3.94	□□□□□ -1.78
YDL041W	YDL041W	UBP15	P50101	1230 aa		3.94	□□□□□ -1.78
YDL041W	YDL041W	CWC15	Q03772	175 aa	Known RBP	3.94	□□□□□ -1.78
YDL041W	YDL041W	PNP1	Q05788	311 aa		3.94	□□□□□ -1.78
YDL041W	YDL041W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	3.93	□□□□□ -1.78	not detected
YDL041W	YDL041W	GAR1	P28007	205 aa	Known RBP	3.93	□□□□□ -1.78
YDL041W	YDL041W	RGA1	P39083	1007 aa		3.93	□□□□□ -1.78
YDL041W	YDL041W	FOX2	Q02207	900 aa	Known RBP	3.93	□□□□□ -1.78
YDL041W	YDL041W	UTP4	Q06679	776 aa	Known RBP	3.93	□□□□□ -1.78
YDL041W	YDL041W	TY1A-BL	Q12266	440 aa		3.93	□□□□□ -1.78
YDL041W	YDL041W	FUR4	P05316	633 aa	Known RBP	3.92	□□□□□ -1.78
YDL041W	YDL041W	IRE1	P32361	1115 aa		3.92	□□□□□ -1.78
YDL041W	YDL041W	RRN6	P32786	894 aa		3.92	□□□□□ -1.78
YDL041W	YDL041W	SLA1	P32790	1244 aa		3.92	□□□□□ -1.78
YDL041W	YDL041W	TY1A-DR3	Q12441	440 aa		3.92	□□□□□ -1.78
YDL041W	YDL041W	MLF3	P32047	452 aa		3.91	□□□□□ -1.78
YDL041W	YDL041W	SUV3	P32580	737 aa		3.91	□□□□□ -1.78
YDL041W	YDL041W	TPS3	P38426	1054 aa	Known RBP	3.91	□□□□□ -1.78
YDL041W	YDL041W	HXT5	P38695	592 aa		3.91	□□□□□ -1.78
YDL041W	YDL041W	OSH7	P38755	437 aa		3.91	□□□□□ -1.78
YDL041W	YDL041W	CAB1	Q04430	367 aa		3.91	□□□□□ -1.78
YDL041W	YDL041W	KAR5	Q04746	504 aa		3.91	□□□□□ -1.78
YDL041W	YDL041W	Q0182	Q9ZZW1	134 aa		3.91	□□□□□ -1.78
YDL041W	YDL041W	CDC19	P00549	500 aa	Known RBP	3.9	□□□□□ -1.79
YDL041W	YDL041W	PDC6	P26263	563 aa	Known RBP	3.9	□□□□□ -1.79
YDL041W	YDL041W	ISC10	P32645	267 aa		3.9	□□□□□ -1.79
YDL041W	YDL041W	SHM1	P37292	490 aa	Predicted RBP	3.9	□□□□□ -1.79
YDL041W	YDL041W	YBR197C	P38306	217 aa		3.9	□□□□□ -1.79
YDL041W	YDL041W	YNL165W	P53891	406 aa		3.9	□□□□□ -1.79
YDL041W	YDL041W	RPP1A	P05318	106 aa	Predicted RBP	3.89	□□□□□ -1.79
YDL041W	YDL041W	MRPL33	P20084	86 aa		3.89	□□□□□ -1.79
YDL041W	YDL041W	ROG3	P43602	733 aa		3.89	□□□□□ -1.79
YDL041W	YDL041W	CAF120	P53836	1060 aa		3.89	□□□□□ -1.79
YDL041W	YDL041W	PSH1	Q12161	406 aa		3.89	□□□□□ -1.79
YDL041W	YDL041W	HAT1	Q12341	374 aa		3.89	□□□□□ -1.79
YDL041W	YDL041W	ACO2	P39533	789 aa		3.88	□□□□□ -1.79
YDL041W	YDL041W	BOL3	P39724	118 aa		3.88	□□□□□ -1.79
YDL041W	YDL041W	MTO1	P53070	669 aa		3.88	□□□□□ -1.79
YDL041W	YDL041W	TY1A-MR1	Q04215	440 aa		3.88	□□□□□ -1.79
YDL041W	YDL041W	RPS31	P05759	152 aa	Known RBP	3.87	□□□□□ -1.79
YDL041W	YDL041W	GLO3	P38682	493 aa	Known RBP	3.87	□□□□□ -1.79
YDL041W	YDL041W	YIR007W	P40566	764 aa		3.87	□□□□□ -1.79
YDL041W	YDL041W	ATG1	P53104	897 aa		3.87	□□□□□ -1.79
YDL041W	YDL041W	DNA2	P38859	1522 aa		3.86	□□□□□ -1.79
YDL041W	YDL041W	LEU1	P07264	779 aa	Known RBP	3.86	□□□□□ -1.79
YDL041W	YDL041W	KAP122	P32767	1081 aa		3.86	□□□□□ -1.79
YDL041W	YDL041W	LDH1	P38139	375 aa		3.86	□□□□□ -1.79
YDL041W	YDL041W	SSF1	P38789	453 aa	Predicted RBP	3.86	□□□□□ -1.79
YDL041W	YDL041W	DYS1	P38791	387 aa		3.86	□□□□□ -1.79
YDL041W	YDL041W	QDR2	P40474	542 aa		3.86	□□□□□ -1.79
YDL041W	YDL041W	STB3	Q12427	513 aa		3.86	□□□□□ -1.79
YDL041W	YDL041W	LSO1	Q3E827	93 aa		3.86	□□□□□ -1.79
YDL041W	YDL041W	YBL113C	Q7M4S9	792 aa		3.86	□□□□□ -1.79
YDL041W	YDL041W	DIT1	P21623	536 aa		3.85	□□□□□ -1.79
YDL041W	YDL041W	VMA3	P25515	160 aa		3.85	□□□□□ -1.79
YDL041W	YDL041W	MRPL16	P38064	232 aa		3.85	□□□□□ -1.79
YDL041W	YDL041W	GRS1	P38088	690 aa	Known RBP	3.85	□□□□□ -1.79
YDL041W	YDL041W	QDR1	P40475	563 aa		3.85	□□□□□ -1.79
YDL041W	YDL041W	SPR3	P41901	512 aa		3.85	□□□□□ -1.79
YDL041W	YDL041W	ALD2	P47771	506 aa		3.85	□□□□□ -1.79
YDL041W	YDL041W	CUZ1	P53899	274 aa		3.85	□□□□□ -1.79
YDL041W	YDL041W	NAM8	Q00539	523 aa	Known RBP	3.85	□□□□□ -1.79
YDL041W	YDL041W	YMR265C	Q03508	461 aa	Known RBP	3.85	□□□□□ -1.79
YDL041W	YDL041W	RGP1	P16664	663 aa		3.84	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 56.5 ms