RNA–Protein interactions for RNA: YDL041W

YDL041W, Transcript of Dubious open reading frame, yeast

Gene YDL041W, Length 354 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL041W	YDL041W	MTC1	P47018	478 aa	Known RBP	8.09	□□□□□ -1.11
YDL041W	YDL041W	DRS1	P32892	752 aa	Known RBP	8.04	□□□□□ -1.12
YDL041W	YDL041W	BFR2	Q06631	534 aa	Known RBP	6.92	□□□□□ -1.3
YDL041W	YDL041W	DIP2	Q12220	943 aa	Predicted RBP	6.86	□□□□□ -1.31
YDL041W	YDL041W	FAP1	P53971	965 aa		6.79	□□□□□ -1.32
YDL041W	YDL041W	AVT3	P36062	692 aa		6.72	□□□□□ -1.33
YDL041W	YDL041W	ISW2	Q08773	1120 aa		6.64	□□□□□ -1.35
YDL041W	YDL041W	PRI1	P10363	409 aa		6.54	□□□□□ -1.36
YDL041W	YDL041W	RSE1	Q04693	1361 aa	Known RBP	6.52	□□□□□ -1.37
YDL041W	YDL041W	RPG1	P38249	964 aa	Known RBP	6.51	□□□□□ -1.37
YDL041W	YDL041W	AAD16	Q02895	342 aa		6.46	□□□□□ -1.38
YDL041W	YDL041W	TFA1	P36100	482 aa		6.41	□□□□□ -1.38
YDL041W	YDL041W	PRY3	P47033	881 aa		6.33	□□□□□ -1.4
YDL041W	YDL041W	RPL17A	P05740	184 aa	Known RBP	6.27	□□□□□ -1.41
YDL041W	YDL041W	RPL17B	P46990	184 aa	Known RBP	6.27	□□□□□ -1.41
YDL041W	YDL041W	REB1	P21538	810 aa		6.24	□□□□□ -1.41
YDL041W	YDL041W	TSR3	Q12094	313 aa	Known RBP	6.2	□□□□□ -1.42
YDL041W	YDL041W	SPT21	P35209	758 aa		6.01	□□□□□ -1.45
YDL041W	YDL041W	MRPL32	P25348	183 aa		5.99	□□□□□ -1.45
YDL041W	YDL041W	HAA1	Q12753	694 aa	Known RBP	5.98	□□□□□ -1.45
YDL041W	YDL041W	RIM101	P33400	625 aa		5.9	□□□□□ -1.46
YDL041W	YDL041W	YCK3	P39962	524 aa		5.9	□□□□□ -1.46
YDL041W	YDL041W	YKR023W	P36119	530 aa	Known RBP	5.82	□□□□□ -1.48
YDL041W	YDL041W	CDC27	P38042	758 aa		5.73	□□□□□ -1.49
YDL041W	YDL041W	HO	P09932	586 aa		5.72	□□□□□ -1.49
YDL041W	YDL041W	TFC8	Q12308	588 aa		5.72	□□□□□ -1.49
YDL041W	YDL041W	OXP1	P28273	1286 aa		5.7	□□□□□ -1.5
YDL041W	YDL041W	YIL055C	P40523	627 aa	Known RBP	5.69	□□□□□ -1.5
YDL041W	YDL041W	DCD1	P06773	312 aa		5.68	□□□□□ -1.5
YDL041W	YDL041W	PTP3	P40048	928 aa		5.68	□□□□□ -1.5
YDL041W	YDL041W	YAH1	Q12184	172 aa	Known RBP	5.65	□□□□□ -1.5
YDL041W	YDL041W	SSP1	P38871	571 aa		5.63	□□□□□ -1.51
YDL041W	YDL041W	YGL015C	P33199	130 aa		5.61	□□□□□ -1.51
YDL041W	YDL041W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	5.59	□□□□□ -1.51	not detected
YDL041W	YDL041W	RSM7	P47150	247 aa		5.56	□□□□□ -1.52
YDL041W	YDL041W	UBP10	P53874	792 aa	Predicted RBP	5.56	□□□□□ -1.52
YDL041W	YDL041W	BCH2	P36122	765 aa		5.55	□□□□□ -1.52
YDL041W	YDL041W	YLR271W	Q06152	274 aa		5.54	□□□□□ -1.52
YDL041W	YDL041W	MAP2	P38174	421 aa	Known RBP	5.52	□□□□□ -1.53
YDL041W	YDL041W	SCY1	P53009	804 aa		5.51	□□□□□ -1.53
YDL041W	YDL041W	BBC1	P47068	1157 aa		5.5	□□□□□ -1.53
YDL041W	YDL041W	AI2	P03876	854 aa		5.48	□□□□□ -1.53
YDL041W	YDL041W	EPS1	P40557	701 aa		5.46	□□□□□ -1.54
YDL041W	YDL041W	MGA2	P40578	1113 aa		5.44	□□□□□ -1.54
YDL041W	YDL041W	SLX5	P32828	619 aa	Known RBP	5.43	□□□□□ -1.54
YDL041W	YDL041W	RQC2	Q12532	1038 aa	Known RBP	5.43	□□□□□ -1.54
YDL041W	YDL041W	BDF1	P35817	686 aa		5.42	□□□□□ -1.54
YDL041W	YDL041W	PSD2	P53037	1138 aa	Known RBP	5.42	□□□□□ -1.54
YDL041W	YDL041W	CST9	Q06032	482 aa		5.37	□□□□□ -1.55
YDL041W	YDL041W	TIF4632	P39936	914 aa	Known RBP	5.36	□□□□□ -1.55
YDL041W	YDL041W	MRM1	P25270	412 aa		5.31	□□□□□ -1.56
YDL041W	YDL041W	TGL3	P40308	642 aa		5.27	□□□□□ -1.57
YDL041W	YDL041W	RTG3	P38165	486 aa		5.25	□□□□□ -1.57
YDL041W	YDL041W	DMA1	P38823	416 aa		5.24	□□□□□ -1.57
YDL041W	YDL041W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
YDL041W	YDL041W	RCR1	P38212	213 aa		5.19	□□□□□ -1.58
YDL041W	YDL041W	YAP5	P40574	245 aa		5.18	□□□□□ -1.58
YDL041W	YDL041W	RAM2	P29703	316 aa		5.16	□□□□□ -1.58
YDL041W	YDL041W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	5.16	□□□□□ -1.58	not detected
YDL041W	YDL041W	VPS29	P38759	282 aa		5.15	□□□□□ -1.59
YDL041W	YDL041W	YOR238W	Q08634	303 aa		5.15	□□□□□ -1.59
YDL041W	YDL041W	MAK11	P20484	414 aa	Known RBP	5.13	□□□□□ -1.59
YDL041W	YDL041W	DBP1	P24784	617 aa	Known RBP	5.11	□□□□□ -1.59
YDL041W	YDL041W	STS1	P38637	319 aa		5.1	□□□□□ -1.59
YDL041W	YDL041W	YFR006W	P43590	535 aa		5.09	□□□□□ -1.59
YDL041W	YDL041W	PIB1	Q06651	286 aa		5.09	□□□□□ -1.59
YDL041W	YDL041W	MST1	P07236	462 aa		5.08	□□□□□ -1.6
YDL041W	YDL041W	GTT3	P39996	337 aa		5.08	□□□□□ -1.6
YDL041W	YDL041W	MIF2	P35201	549 aa		5.06	□□□□□ -1.6
YDL041W	YDL041W	SET1	P38827	1080 aa	Known RBP	5.05	□□□□□ -1.6
YDL041W	YDL041W	COQ8	P27697	501 aa		5.04	□□□□□ -1.6
YDL041W	YDL041W	VMA1	P17255	1071 aa	Known RBP	5.03	□□□□□ -1.6
YDL041W	YDL041W	IFH1	P39520	1085 aa		5.02	□□□□□ -1.61
YDL041W	YDL041W	UBP9	P39967	754 aa		5.01	□□□□□ -1.61
YDL041W	YDL041W	NOP53	Q12080	455 aa	Known RBP	5	□□□□□ -1.61
YDL041W	YDL041W	EDS1	P38073	919 aa		4.99	□□□□□ -1.61
YDL041W	YDL041W	SAS10	Q12136	610 aa	Predicted RBP	4.99	□□□□□ -1.61
YDL041W	YDL041W	PTC3	P34221	468 aa	Known RBP	4.97	□□□□□ -1.61
YDL041W	YDL041W	SAM3	Q08986	587 aa		4.97	□□□□□ -1.61
YDL041W	YDL041W	WSC3	Q12215	556 aa		4.97	□□□□□ -1.61
YDL041W	YDL041W	YBL029C-A	Q3E756	94 aa		4.96	□□□□□ -1.62
YDL041W	YDL041W	ABP1	P15891	592 aa	Known RBP	4.95	□□□□□ -1.62
YDL041W	YDL041W	SET4	P42948	560 aa		4.95	□□□□□ -1.62
YDL041W	YDL041W	ATH1	P48016	1211 aa		4.95	□□□□□ -1.62
YDL041W	YDL041W	YPR148C	Q06523	435 aa		4.95	□□□□□ -1.62
YDL041W	YDL041W	YOL036W	Q08206	761 aa		4.95	□□□□□ -1.62
YDL041W	YDL041W	GRE2	Q12068	342 aa	Known RBP	4.95	□□□□□ -1.62
YDL041W	YDL041W	MSB4	Q12317	492 aa		4.95	□□□□□ -1.62
YDL041W	YDL041W	GYP5	Q12344	894 aa		4.95	□□□□□ -1.62
YDL041W	YDL041W	VPS70	P47161	811 aa		4.94	□□□□□ -1.62
YDL041W	YDL041W	GUT1	P32190	709 aa		4.92	□□□□□ -1.62
YDL041W	YDL041W	VNX1	P42839	908 aa		4.92	□□□□□ -1.62
YDL041W	YDL041W	BUD31	P25337	157 aa	Predicted RBP	4.91	□□□□□ -1.62
YDL041W	YDL041W	EAP1	P36041	632 aa	Known RBP	4.91	□□□□□ -1.62
YDL041W	YDL041W	CKB1	P43639	278 aa		4.91	□□□□□ -1.62
YDL041W	YDL041W	HTA1	P04911	132 aa	Known RBP	4.9	□□□□□ -1.63
YDL041W	YDL041W	HTA2	P04912	132 aa		4.9	□□□□□ -1.63
YDL041W	YDL041W	SPP1	Q03012	353 aa		4.9	□□□□□ -1.63
YDL041W	YDL041W	DCW1	P36091	449 aa		4.89	□□□□□ -1.63
YDL041W	YDL041W	TIF11	P38912	153 aa	Known RBP	4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms