RNA–Protein interactions for RNA: YCR004C

YCP4, Transcript of Protein of unknown function, yeastyeast

Gene YCP4, Length 744 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCP4YCR004C NSE3Q05541 303 aa10.77□□□□□ -0.69
YCP4YCR004C TRK1P12685 1235 aa10.76□□□□□ -0.69
YCP4YCR004C GAP1P19145 602 aaPredicted RBP10.76□□□□□ -0.69
YCP4YCR004C UBP16Q02863 499 aa10.76□□□□□ -0.69
YCP4YCR004C SYF1Q04048 859 aaPredicted RBP10.76□□□□□ -0.69
YCP4YCR004C DPL1Q05567 589 aa10.76□□□□□ -0.69
YCP4YCR004C SDH2P21801 266 aa10.75□□□□□ -0.69
YCP4YCR004C HAT1Q12341 374 aa10.75□□□□□ -0.69
YCP4YCR004C ARG8P18544 423 aa10.74□□□□□ -0.69
YCP4YCR004C FIG2P25653 1609 aa10.73□□□□□ -0.69
YCP4YCR004C APL2P36000 726 aaPredicted RBP10.73□□□□□ -0.69
YCP4YCR004C PEA2P40091 420 aa10.73□□□□□ -0.69
YCP4YCR004C TRM44Q02648 567 aaKnown RBP10.73□□□□□ -0.69
YCP4YCR004C DCD1P06773 312 aa10.72□□□□□ -0.69
YCP4YCR004C TIF4632P39936 914 aaKnown RBP10.72□□□□□ -0.69
YCP4YCR004C VPS64Q03944 604 aa10.72□□□□□ -0.69
YCP4YCR004C TIF6Q12522 245 aaKnown RBP10.72□□□□□ -0.69
YCP4YCR004C SSK22P25390 1331 aaPredicted RBP10.71□□□□□ -0.69
YCP4YCR004C EMP47P43555 445 aa10.71□□□□□ -0.69
YCP4YCR004C CWC15Q03772 175 aaKnown RBP10.71□□□□□ -0.69
YCP4YCR004C SRF1Q12516 437 aa10.7□□□□□ -0.7
YCP4YCR004C POL5P39985 1022 aaKnown RBP10.69□□□□□ -0.7
YCP4YCR004C YNL050CP53952 270 aa10.69□□□□□ -0.7
YCP4YCR004C YPR204WQ08995 1032 aa10.69□□□□□ -0.7
YCP4YCR004C HKR1P41809 1802 aa10.68□□□□□ -0.7
YCP4YCR004C YGR117CP53270 476 aa10.68□□□□□ -0.7
YCP4YCR004C TYW1Q08960 810 aaKnown RBP10.68□□□□□ -0.7
YCP4YCR004C AVT3P36062 692 aa10.67□□□□□ -0.7
YCP4YCR004C VPS4P52917 437 aa10.67□□□□□ -0.7
YCP4YCR004C HPR1P17629 752 aaKnown RBP10.66□□□□□ -0.7
YCP4YCR004C PKH1Q03407 766 aa10.66□□□□□ -0.7
YCP4YCR004C CRF1Q04930 467 aa10.66□□□□□ -0.7
YCP4YCR004C BSD2P38356 321 aa10.65□□□□□ -0.7
YCP4YCR004C ZDS2P54786 942 aa10.65□□□□□ -0.7
YCP4YCR004C LYS2P07702 1392 aa10.65□□□□□ -0.71
YCP4YCR004C AFG2P32794 780 aa10.64□□□□□ -0.71
YCP4YCR004C ZDS1P50111 915 aaKnown RBP10.64□□□□□ -0.71
YCP4YCR004C SEN54Q02825 467 aaPredicted RBP10.64□□□□□ -0.71
YCP4YCR004C RRG1Q12167 365 aaPredicted RBP10.64□□□□□ -0.71
YCP4YCR004C MAC1P35192 417 aa10.63□□□□□ -0.71
YCP4YCR004C NSR1P27476 414 aaKnown RBP RIP-Chip data10.62□□□□□ -0.71not detected
YCP4YCR004C SET4P42948 560 aa10.62□□□□□ -0.71
YCP4YCR004C RRP46P53256 223 aaPredicted RBP10.62□□□□□ -0.71
YCP4YCR004C STV1P37296 890 aa10.61□□□□□ -0.71
YCP4YCR004C HVG1P0CE11 249 aa10.6□□□□□ -0.71
YCP4YCR004C MAM1P40065 302 aa10.6□□□□□ -0.71
YCP4YCR004C NCS6P53088 359 aa10.6□□□□□ -0.71
YCP4YCR004C UBX2Q04228 584 aa10.6□□□□□ -0.71
YCP4YCR004C BMS1Q08965 1183 aaKnown RBP10.6□□□□□ -0.71
YCP4YCR004C CSR2Q12734 1121 aa10.6□□□□□ -0.71
YCP4YCR004C COQ4O13525 335 aa10.59□□□□□ -0.71
YCP4YCR004C YBR287WP38355 427 aa10.59□□□□□ -0.71
YCP4YCR004C RTR1P40084 226 aaPredicted RBP10.59□□□□□ -0.71
YCP4YCR004C YLR271WQ06152 274 aa10.59□□□□□ -0.71
YCP4YCR004C GAS5Q08193 484 aa10.59□□□□□ -0.71
YCP4YCR004C DPH6Q12429 685 aa10.59□□□□□ -0.71
YCP4YCR004C KRE2P27809 442 aa10.58□□□□□ -0.72
YCP4YCR004C RRT6P53117 311 aaPredicted RBP10.58□□□□□ -0.72
YCP4YCR004C TRP5P00931 707 aaKnown RBP10.57□□□□□ -0.72
YCP4YCR004C RSC30P38781 883 aa10.57□□□□□ -0.72
YCP4YCR004C CST9Q06032 482 aa10.57□□□□□ -0.72
YCP4YCR004C GSM1P42950 618 aa10.56□□□□□ -0.72
YCP4YCR004C CBP1P07252 654 aa10.55□□□□□ -0.72
YCP4YCR004C PRD1P25375 712 aa10.55□□□□□ -0.72
YCP4YCR004C PCS60P38137 543 aaKnown RBP RIP-Chip data10.55□□□□□ -0.72not detected
YCP4YCR004C PNT1P38969 423 aa10.55□□□□□ -0.72
YCP4YCR004C ICP55P40051 511 aa10.55□□□□□ -0.72
YCP4YCR004C DNM1P54861 757 aa10.55□□□□□ -0.72
YCP4YCR004C FCP1Q03254 732 aa10.55□□□□□ -0.72
YCP4YCR004C PIB1Q06651 286 aa10.55□□□□□ -0.72
YCP4YCR004C RPT4P53549 437 aaKnown RBP10.54□□□□□ -0.72
YCP4YCR004C YOL057WQ08225 711 aa10.54□□□□□ -0.72
YCP4YCR004C APE3P37302 537 aaKnown RBP10.52□□□□□ -0.73
YCP4YCR004C PAM1P37304 830 aaKnown RBP10.52□□□□□ -0.73
YCP4YCR004C PRP42Q03776 544 aaKnown RBP10.51□□□□□ -0.73
YCP4YCR004C GSC2P40989 1895 aa10.51□□□□□ -0.73
YCP4YCR004C GYP7P48365 746 aa10.5□□□□□ -0.73
YCP4YCR004C MGM1P32266 881 aa10.49□□□□□ -0.73
YCP4YCR004C NGR1P32831 672 aaKnown RBP10.49□□□□□ -0.73
YCP4YCR004C MOT2P34909 587 aaKnown RBP10.49□□□□□ -0.73
YCP4YCR004C CST6P40535 587 aa10.49□□□□□ -0.73
YCP4YCR004C RBA50Q04418 439 aa10.49□□□□□ -0.73
YCP4YCR004C THI3Q07471 609 aa10.49□□□□□ -0.73
YCP4YCR004C YKR023WP36119 530 aaKnown RBP10.48□□□□□ -0.73
YCP4YCR004C SPL2P38839 148 aa10.48□□□□□ -0.73
YCP4YCR004C SWI1P09547 1314 aa10.48□□□□□ -0.73
YCP4YCR004C FLO11P08640 1367 aa10.48□□□□□ -0.73
YCP4YCR004C NUP133P36161 1157 aa10.47□□□□□ -0.73
YCP4YCR004C GAL2P13181 574 aa10.46□□□□□ -0.73
YCP4YCR004C PSD2P53037 1138 aaKnown RBP10.46□□□□□ -0.73
YCP4YCR004C CDC27P38042 758 aa10.45□□□□□ -0.74
YCP4YCR004C ITC1P53125 1264 aa10.45□□□□□ -0.74
YCP4YCR004C JIP4Q03361 876 aa10.45□□□□□ -0.74
YCP4YCR004C PSH1Q12161 406 aa10.45□□□□□ -0.74
YCP4YCR004C SAC3P46674 1301 aa10.44□□□□□ -0.74
YCP4YCR004C RPS7AP26786 190 aaKnown RBP10.44□□□□□ -0.74
YCP4YCR004C NIT1P40447 199 aa10.44□□□□□ -0.74
YCP4YCR004C SRC1Q03707 834 aa10.44□□□□□ -0.74
YCP4YCR004C THI22Q06490 572 aa10.44□□□□□ -0.74
YCP4YCR004C RTT109Q07794 436 aa10.44□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms