RNA–Protein interactions for RNA: YDR337W

MRPS28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene MRPS28, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPS28YDR337W LIP2Q06005 328 aa5.7□□□□□ -1.5
MRPS28YDR337W ANT1Q06497 328 aa5.7□□□□□ -1.5
MRPS28YDR337W SWT1Q12104 458 aa5.7□□□□□ -1.5
MRPS28YDR337W RFM1Q12192 310 aa5.7□□□□□ -1.5
MRPS28YDR337W YLR146W-AQ2V2P1 62 aa5.7□□□□□ -1.5
MRPS28YDR337W HUG1Q6Q5K6 68 aa5.7□□□□□ -1.5
MRPS28YDR337W SEC16P48415 2195 aaKnown RBP5.7□□□□□ -1.5
MRPS28YDR337W CUP1-1P0CX80 61 aa5.69□□□□□ -1.5
MRPS28YDR337W CUP1-2P0CX81 61 aa5.69□□□□□ -1.5
MRPS28YDR337W VMA3P25515 160 aa5.69□□□□□ -1.5
MRPS28YDR337W DAL80P26343 269 aa5.69□□□□□ -1.5
MRPS28YDR337W YKL107WP34251 309 aa5.69□□□□□ -1.5
MRPS28YDR337W SHM2P37291 469 aaKnown RBP5.69□□□□□ -1.5
MRPS28YDR337W OSH7P38755 437 aa5.69□□□□□ -1.5
MRPS28YDR337W CTR2P38865 189 aa5.69□□□□□ -1.5
MRPS28YDR337W DPB4Q04603 196 aaKnown RBP5.69□□□□□ -1.5
MRPS28YDR337W NOC4Q06512 552 aaPredicted RBP5.69□□□□□ -1.5
MRPS28YDR337W YCT1Q12235 531 aa5.69□□□□□ -1.5
MRPS28YDR337W ATG31Q12421 196 aa5.69□□□□□ -1.5
MRPS28YDR337W SSA3P09435 649 aaKnown RBP5.68□□□□□ -1.5
MRPS28YDR337W YML003WP0CF16 290 aa5.68□□□□□ -1.5
MRPS28YDR337W ERG2P32352 222 aa5.68□□□□□ -1.5
MRPS28YDR337W YKL187CP34231 750 aa5.68□□□□□ -1.5
MRPS28YDR337W MTR2P34232 184 aaKnown RBP5.68□□□□□ -1.5
MRPS28YDR337W YER121WP40076 114 aa5.68□□□□□ -1.5
MRPS28YDR337W BNA2P47125 453 aa5.68□□□□□ -1.5
MRPS28YDR337W XPT1P47165 209 aa5.68□□□□□ -1.5
MRPS28YDR337W PNC1P53184 216 aaKnown RBP5.68□□□□□ -1.5
MRPS28YDR337W MRPL22P53881 309 aa5.68□□□□□ -1.5
MRPS28YDR337W YDL086WQ07505 273 aa5.68□□□□□ -1.5
MRPS28YDR337W YFH1Q07540 174 aa5.68□□□□□ -1.5
MRPS28YDR337W PRP8P33334 2413 aaKnown RBP5.68□□□□□ -1.5
MRPS28YDR337W GAR1P28007 205 aaKnown RBP5.67□□□□□ -1.5
MRPS28YDR337W COQ2P32378 372 aa5.67□□□□□ -1.5
MRPS28YDR337W SPC29P33419 253 aa5.67□□□□□ -1.5
MRPS28YDR337W ERV15P38312 142 aa5.67□□□□□ -1.5
MRPS28YDR337W QRI1P43123 477 aaKnown RBP5.67□□□□□ -1.5
MRPS28YDR337W AGX1P43567 385 aa5.67□□□□□ -1.5
MRPS28YDR337W YJR012CP47087 207 aa5.67□□□□□ -1.5
MRPS28YDR337W GPI15P53961 229 aa5.67□□□□□ -1.5
MRPS28YDR337W YDR415CQ04033 374 aaPredicted RBP5.67□□□□□ -1.5
MRPS28YDR337W ASM4Q05166 528 aa5.67□□□□□ -1.5
MRPS28YDR337W BER1Q06688 274 aaKnown RBP5.67□□□□□ -1.5
MRPS28YDR337W ALG6Q12001 544 aaKnown RBP5.67□□□□□ -1.5
MRPS28YDR337W FCF2Q12035 217 aaPredicted RBP5.67□□□□□ -1.5
MRPS28YDR337W YMR105W-AQ8TGS8 64 aa5.67□□□□□ -1.5
MRPS28YDR337W YBR085C-AO43137 85 aa5.66□□□□□ -1.5
MRPS28YDR337W MRS4P23500 304 aa5.66□□□□□ -1.5
MRPS28YDR337W EMP24P32803 203 aaKnown RBP5.66□□□□□ -1.5
MRPS28YDR337W REC104P33323 182 aa5.66□□□□□ -1.5
MRPS28YDR337W PCL7P40186 285 aa5.66□□□□□ -1.5
MRPS28YDR337W GAT2P40209 560 aa5.66□□□□□ -1.5
MRPS28YDR337W RPL13BP40212 199 aaKnown RBP5.66□□□□□ -1.5
MRPS28YDR337W AIR1P40507 360 aaKnown RBP5.66□□□□□ -1.5
MRPS28YDR337W YGL262WP53054 175 aa5.66□□□□□ -1.5
MRPS28YDR337W YGL117WP53133 265 aa5.66□□□□□ -1.5
MRPS28YDR337W PKP2P53170 491 aa5.66□□□□□ -1.5
MRPS28YDR337W YOR292CQ08743 309 aa5.66□□□□□ -1.5
MRPS28YDR337W AEP3Q12089 606 aa5.66□□□□□ -1.5
MRPS28YDR337W DGK1Q12382 290 aa5.66□□□□□ -1.5
MRPS28YDR337W RPL13AQ12690 199 aaPredicted RBP5.66□□□□□ -1.5
MRPS28YDR337W ISN1Q99312 450 aa5.66□□□□□ -1.5
MRPS28YDR337W RPP1AP05318 106 aaPredicted RBP5.65□□□□□ -1.5
MRPS28YDR337W RPD3P32561 433 aa5.65□□□□□ -1.5
MRPS28YDR337W CUE1P38428 203 aa5.65□□□□□ -1.5
MRPS28YDR337W ASP1P38986 381 aaPredicted RBP5.65□□□□□ -1.5
MRPS28YDR337W YEA6P39953 335 aa5.65□□□□□ -1.5
MRPS28YDR337W PRM5P40476 318 aa5.65□□□□□ -1.5
MRPS28YDR337W PIR5P46999 287 aa5.65□□□□□ -1.5
MRPS28YDR337W WSC2P53832 503 aa5.65□□□□□ -1.5
MRPS28YDR337W YIF1P53845 314 aaKnown RBP5.65□□□□□ -1.5
MRPS28YDR337W TEX1P53851 422 aaKnown RBP5.65□□□□□ -1.5
MRPS28YDR337W ACT1P60010 375 aaKnown RBP5.65□□□□□ -1.5
MRPS28YDR337W TIM10P87108 93 aa5.65□□□□□ -1.5
MRPS28YDR337W RPL21AQ02753 160 aaKnown RBP5.65□□□□□ -1.5
MRPS28YDR337W PAM18Q07914 168 aa5.65□□□□□ -1.5
MRPS28YDR337W YOL029CQ08187 201 aa5.65□□□□□ -1.5
MRPS28YDR337W YOR029WQ12243 111 aa5.65□□□□□ -1.5
MRPS28YDR337W RPL21BQ12672 160 aaKnown RBP5.65□□□□□ -1.5
MRPS28YDR337W DBP2P24783 546 aaKnown RBP5.64□□□□□ -1.51
MRPS28YDR337W LSB5P25369 354 aa5.64□□□□□ -1.51
MRPS28YDR337W LSM12P38828 187 aaKnown RBP5.64□□□□□ -1.51
MRPS28YDR337W IKI1P38874 309 aa5.64□□□□□ -1.51
MRPS28YDR337W GCV3P39726 170 aaPredicted RBP5.64□□□□□ -1.51
MRPS28YDR337W SGN1P40561 250 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
MRPS28YDR337W GLR1P41921 483 aaKnown RBP5.64□□□□□ -1.51
MRPS28YDR337W TTI2P47168 421 aa5.64□□□□□ -1.51
MRPS28YDR337W SRB7P47822 140 aa5.64□□□□□ -1.51
MRPS28YDR337W BUL1P48524 976 aa5.64□□□□□ -1.51
MRPS28YDR337W PEF1P53238 335 aa5.64□□□□□ -1.51
MRPS28YDR337W INN1P53901 409 aa5.64□□□□□ -1.51
MRPS28YDR337W YNL046WP53956 172 aa5.64□□□□□ -1.51
MRPS28YDR337W TIM44Q01852 431 aa5.64□□□□□ -1.51
MRPS28YDR337W EST3Q03096 181 aa5.64□□□□□ -1.51
MRPS28YDR337W ERP1Q05359 219 aaKnown RBP5.64□□□□□ -1.51
MRPS28YDR337W PRP11Q07350 266 aaPredicted RBP5.64□□□□□ -1.51
MRPS28YDR337W ATG5Q12380 294 aa5.64□□□□□ -1.51
MRPS28YDR337W TRA1P38811 3744 aa5.64□□□□□ -1.51
MRPS28YDR337W RPL43AP0CX25 92 aaKnown RBP5.63□□□□□ -1.51
MRPS28YDR337W RPL43BP0CX26 92 aa5.63□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 64 ms