RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W SCM4P32564 187 aa1.46□□□□□ -2.18
BRO1YPL084W COX15P40086 486 aa1.46□□□□□ -2.18
BRO1YPL084W MRPL49P40858 161 aaPredicted RBP1.46□□□□□ -2.18
BRO1YPL084W MSS2P40990 351 aa1.46□□□□□ -2.18
BRO1YPL084W RMR1P53060 241 aa1.46□□□□□ -2.18
BRO1YPL084W NSA1P53136 463 aaPredicted RBP1.46□□□□□ -2.18
BRO1YPL084W ATG2P53855 1592 aa1.46□□□□□ -2.18
BRO1YPL084W YRF1-1P0CX20 1796 aa1.46□□□□□ -2.18
BRO1YPL084W YRF1-5P0CX21 1796 aa1.46□□□□□ -2.18
BRO1YPL084W YRF1-8P0CX22 1796 aa1.46□□□□□ -2.18
BRO1YPL084W YOR1P53049 1477 aa1.46□□□□□ -2.18
BRO1YPL084W FKS1P38631 1876 aaKnown RBP1.46□□□□□ -2.18
BRO1YPL084W BCY1P07278 416 aaKnown RBP1.45□□□□□ -2.18
BRO1YPL084W FIS1P40515 155 aa1.45□□□□□ -2.18
BRO1YPL084W SMD3P43321 101 aaKnown RBP1.45□□□□□ -2.18
BRO1YPL084W SNX4P47057 423 aa1.45□□□□□ -2.18
BRO1YPL084W ILM1P47155 203 aa1.45□□□□□ -2.18
BRO1YPL084W TOS8P53147 276 aa1.45□□□□□ -2.18
BRO1YPL084W CDC123Q05791 360 aa1.45□□□□□ -2.18
BRO1YPL084W NUP170P38181 1502 aa1.45□□□□□ -2.18
BRO1YPL084W STU1P38198 1513 aa1.45□□□□□ -2.18
BRO1YPL084W SIR4P11978 1358 aa1.45□□□□□ -2.18
BRO1YPL084W YHR139C-AO13536 103 aa1.45□□□□□ -2.18
BRO1YPL084W COX5AP00424 153 aa1.45□□□□□ -2.18
BRO1YPL084W ARG80P07249 177 aa1.45□□□□□ -2.18
BRO1YPL084W VMA11P32842 164 aa1.45□□□□□ -2.18
BRO1YPL084W GCN20P43535 752 aaKnown RBP1.45□□□□□ -2.18
BRO1YPL084W ATG39Q06159 398 aa1.45□□□□□ -2.18
BRO1YPL084W NIP7Q08962 181 aaKnown RBP1.45□□□□□ -2.18
BRO1YPL084W ESP1Q03018 1630 aa1.45□□□□□ -2.18
BRO1YPL084W NHP6BP11633 99 aaKnown RBP1.44□□□□□ -2.18
BRO1YPL084W PBN1P25580 416 aa1.44□□□□□ -2.18
BRO1YPL084W YPT52P36018 234 aaKnown RBP1.44□□□□□ -2.18
BRO1YPL084W RIB1P38066 345 aa1.44□□□□□ -2.18
BRO1YPL084W URA8P38627 578 aaPredicted RBP1.44□□□□□ -2.18
BRO1YPL084W RTC3P38804 111 aaPredicted RBP1.44□□□□□ -2.18
BRO1YPL084W PRE6P40303 254 aaKnown RBP1.44□□□□□ -2.18
BRO1YPL084W ALG13P53178 202 aa1.44□□□□□ -2.18
BRO1YPL084W YML096WQ04489 525 aa1.44□□□□□ -2.18
BRO1YPL084W HEM25Q07534 307 aa1.44□□□□□ -2.18
BRO1YPL084W MHT1Q12525 324 aa1.44□□□□□ -2.18
BRO1YPL084W ARO1P08566 1588 aaKnown RBP1.44□□□□□ -2.18
BRO1YPL084W SNT2P53127 1403 aa1.44□□□□□ -2.18
BRO1YPL084W UFD4P33202 1483 aa1.44□□□□□ -2.18
BRO1YPL084W SPT3P06844 337 aa1.44□□□□□ -2.18
BRO1YPL084W ADH3P07246 375 aaKnown RBP1.44□□□□□ -2.18
BRO1YPL084W FCY2P17064 533 aa1.44□□□□□ -2.18
BRO1YPL084W SSO1P32867 290 aa1.44□□□□□ -2.18
BRO1YPL084W RPF1P38805 295 aaKnown RBP1.44□□□□□ -2.18
BRO1YPL084W CTR2P38865 189 aa1.44□□□□□ -2.18
BRO1YPL084W PEX17P40155 199 aa1.44□□□□□ -2.18
BRO1YPL084W RPA43P46669 326 aa1.44□□□□□ -2.18
BRO1YPL084W HAM1P47119 197 aaKnown RBP1.44□□□□□ -2.18
BRO1YPL084W YGR026WP53217 278 aa1.44□□□□□ -2.18
BRO1YPL084W ERV29P53337 310 aa1.44□□□□□ -2.18
BRO1YPL084W YMR279CQ03263 540 aa1.44□□□□□ -2.18
BRO1YPL084W GIS3Q12418 502 aa1.44□□□□□ -2.18
BRO1YPL084W YOR020W-AQ3E824 90 aa1.44□□□□□ -2.18
BRO1YPL084W SCO1P23833 295 aa1.43□□□□□ -2.18
BRO1YPL084W MNN5P46982 586 aa1.43□□□□□ -2.18
BRO1YPL084W FYV6P53913 173 aa1.43□□□□□ -2.18
BRO1YPL084W TPO4Q12256 659 aa1.43□□□□□ -2.18
BRO1YPL084W EMC6Q12431 108 aa1.43□□□□□ -2.18
BRO1YPL084W YBR121C-AP0C5L4 52 aa1.43□□□□□ -2.18
BRO1YPL084W URA6P15700 204 aa1.43□□□□□ -2.18
BRO1YPL084W COQ1P18900 473 aa1.43□□□□□ -2.18
BRO1YPL084W CBT1P36038 271 aaPredicted RBP1.43□□□□□ -2.18
BRO1YPL084W YAR068WP39564 161 aa1.43□□□□□ -2.18
BRO1YPL084W ERG28P40030 148 aa1.43□□□□□ -2.18
BRO1YPL084W MIC26P50087 233 aa1.43□□□□□ -2.18
BRO1YPL084W SSQ1Q05931 657 aaPredicted RBP1.43□□□□□ -2.18
BRO1YPL084W AKR2Q12013 749 aa1.43□□□□□ -2.18
BRO1YPL084W SEY1Q99287 776 aa1.43□□□□□ -2.18
BRO1YPL084W RPL28P02406 149 aaKnown RBP1.42□□□□□ -2.18
BRO1YPL084W DOA4P32571 926 aa1.42□□□□□ -2.18
BRO1YPL084W SRY1P36007 326 aa1.42□□□□□ -2.18
BRO1YPL084W YBR063CP38083 404 aa1.42□□□□□ -2.18
BRO1YPL084W CGI121Q03705 181 aaKnown RBP1.42□□□□□ -2.18
BRO1YPL084W YKL183C-AQ3E765 70 aa1.42□□□□□ -2.18
BRO1YPL084W SCC2Q04002 1493 aa1.42□□□□□ -2.18
BRO1YPL084W STE18P18852 110 aa1.42□□□□□ -2.18
BRO1YPL084W NTG1P31378 399 aa1.42□□□□□ -2.18
BRO1YPL084W PRP18P33411 251 aaPredicted RBP1.42□□□□□ -2.18
BRO1YPL084W YOR062CP36025 268 aa1.42□□□□□ -2.18
BRO1YPL084W ECM33P38248 429 aaKnown RBP1.42□□□□□ -2.18
BRO1YPL084W GRE3P38715 327 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
BRO1YPL084W DAN1P47178 298 aa1.42□□□□□ -2.18
BRO1YPL084W RAD17P48581 401 aa1.42□□□□□ -2.18
BRO1YPL084W PGA2P53903 129 aa1.42□□□□□ -2.18
BRO1YPL084W ABF2Q02486 183 aa1.42□□□□□ -2.18
BRO1YPL084W PUT1P09368 476 aa1.41□□□□□ -2.18
BRO1YPL084W YNL194CP40169 301 aa1.41□□□□□ -2.18
BRO1YPL084W ATO3Q12359 275 aa1.41□□□□□ -2.18
BRO1YPL084W SSN2P38931 1420 aa1.41□□□□□ -2.18
BRO1YPL084W CDC28P00546 298 aaKnown RBP1.41□□□□□ -2.18
BRO1YPL084W YRB1P41920 201 aaKnown RBP1.41□□□□□ -2.18
BRO1YPL084W YJR056CP47115 236 aa1.41□□□□□ -2.18
BRO1YPL084W NUP57P48837 541 aa1.41□□□□□ -2.18
BRO1YPL084W BRR6P53062 197 aa1.41□□□□□ -2.18
BRO1YPL084W PRM15Q03262 622 aa1.41□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 439 ms