RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W DRS1P32892 752 aaKnown RBP7.73□□□□□ -1.17
BRO1YPL084W MTC1P47018 478 aaKnown RBP7.57□□□□□ -1.2
BRO1YPL084W BFR2Q06631 534 aaKnown RBP6.72□□□□□ -1.33
BRO1YPL084W DIP2Q12220 943 aaPredicted RBP6.54□□□□□ -1.36
BRO1YPL084W AVT3P36062 692 aa6.46□□□□□ -1.37
BRO1YPL084W TFA1P36100 482 aa6.36□□□□□ -1.39
BRO1YPL084W FAP1P53971 965 aa6.15□□□□□ -1.43
BRO1YPL084W ISW2Q08773 1120 aa6.14□□□□□ -1.43
BRO1YPL084W RSE1Q04693 1361 aaKnown RBP6.13□□□□□ -1.43
BRO1YPL084W RPG1P38249 964 aaKnown RBP6.07□□□□□ -1.44
BRO1YPL084W PRI1P10363 409 aa6.03□□□□□ -1.44
BRO1YPL084W AAD16Q02895 342 aa5.91□□□□□ -1.46
BRO1YPL084W RPL17AP05740 184 aaKnown RBP5.91□□□□□ -1.46
BRO1YPL084W RPL17BP46990 184 aaKnown RBP5.91□□□□□ -1.46
BRO1YPL084W REB1P21538 810 aa5.83□□□□□ -1.48
BRO1YPL084W TSR3Q12094 313 aaKnown RBP5.75□□□□□ -1.49
BRO1YPL084W PRY3P47033 881 aa5.73□□□□□ -1.49
BRO1YPL084W SPT21P35209 758 aa5.67□□□□□ -1.5
BRO1YPL084W RIM101P33400 625 aa5.62□□□□□ -1.51
BRO1YPL084W PTP3P40048 928 aa5.53□□□□□ -1.52
BRO1YPL084W MRPL32P25348 183 aa5.51□□□□□ -1.53
BRO1YPL084W YKR023WP36119 530 aaKnown RBP5.49□□□□□ -1.53
BRO1YPL084W RQC2Q12532 1038 aaKnown RBP5.49□□□□□ -1.53
BRO1YPL084W OXP1P28273 1286 aa5.46□□□□□ -1.53
BRO1YPL084W SSP1P38871 571 aa5.42□□□□□ -1.54
BRO1YPL084W YAH1Q12184 172 aaKnown RBP5.42□□□□□ -1.54
BRO1YPL084W YCK3P39962 524 aa5.41□□□□□ -1.54
BRO1YPL084W YIL055CP40523 627 aaKnown RBP5.4□□□□□ -1.54
BRO1YPL084W HOP09932 586 aa5.4□□□□□ -1.55
BRO1YPL084W HAA1Q12753 694 aaKnown RBP5.39□□□□□ -1.55
BRO1YPL084W TFC8Q12308 588 aa5.37□□□□□ -1.55
BRO1YPL084W DCD1P06773 312 aa5.36□□□□□ -1.55
BRO1YPL084W CDC27P38042 758 aa5.35□□□□□ -1.55
BRO1YPL084W YLR271WQ06152 274 aa5.34□□□□□ -1.56
BRO1YPL084W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
BRO1YPL084W DMA1P38823 416 aa5.31□□□□□ -1.56
BRO1YPL084W RSM7P47150 247 aa5.3□□□□□ -1.56
BRO1YPL084W BCH2P36122 765 aa5.23□□□□□ -1.57
BRO1YPL084W MGA2P40578 1113 aa5.22□□□□□ -1.57
BRO1YPL084W AI2P03876 854 aa5.21□□□□□ -1.58
BRO1YPL084W CST9Q06032 482 aa5.19□□□□□ -1.58
BRO1YPL084W PSD2P53037 1138 aaKnown RBP5.17□□□□□ -1.58
BRO1YPL084W BBC1P47068 1157 aa5.17□□□□□ -1.58
BRO1YPL084W EPS1P40557 701 aa5.14□□□□□ -1.59
BRO1YPL084W SCY1P53009 804 aa5.13□□□□□ -1.59
BRO1YPL084W MAP2P38174 421 aaKnown RBP5.12□□□□□ -1.59
BRO1YPL084W YGL015CP33199 130 aa5.11□□□□□ -1.59
BRO1YPL084W BDF1P35817 686 aa5.11□□□□□ -1.59
BRO1YPL084W UBP10P53874 792 aaPredicted RBP5.08□□□□□ -1.6
BRO1YPL084W MRM1P25270 412 aa5.06□□□□□ -1.6
BRO1YPL084W SLX5P32828 619 aaKnown RBP5.01□□□□□ -1.61
BRO1YPL084W RCR1P38212 213 aa5.01□□□□□ -1.61
BRO1YPL084W RAM2P29703 316 aa4.99□□□□□ -1.61
BRO1YPL084W RTG3P38165 486 aa4.99□□□□□ -1.61
BRO1YPL084W SAS10Q12136 610 aaPredicted RBP4.96□□□□□ -1.62
BRO1YPL084W VPS29P38759 282 aa4.92□□□□□ -1.62
BRO1YPL084W SET1P38827 1080 aaKnown RBP4.92□□□□□ -1.62
BRO1YPL084W MAK11P20484 414 aaKnown RBP4.9□□□□□ -1.63
BRO1YPL084W TIF4632P39936 914 aaKnown RBP4.9□□□□□ -1.63
BRO1YPL084W YMR1P47147 688 aaKnown RBP RIP-Chip data4.88□□□□□ -1.63not detected
BRO1YPL084W STS1P38637 319 aa4.85□□□□□ -1.63
BRO1YPL084W TGL3P40308 642 aa4.85□□□□□ -1.63
BRO1YPL084W YFR006WP43590 535 aa4.85□□□□□ -1.63
BRO1YPL084W DBP1P24784 617 aaKnown RBP4.85□□□□□ -1.63
BRO1YPL084W COQ8P27697 501 aa4.84□□□□□ -1.63
BRO1YPL084W VPS70P47161 811 aa4.84□□□□□ -1.64
BRO1YPL084W YOR238WQ08634 303 aa4.84□□□□□ -1.64
BRO1YPL084W MIF2P35201 549 aa4.83□□□□□ -1.64
BRO1YPL084W LEO1P38439 464 aa4.83□□□□□ -1.64
BRO1YPL084W IFH1P39520 1085 aa4.82□□□□□ -1.64
BRO1YPL084W YPR148CQ06523 435 aa4.82□□□□□ -1.64
BRO1YPL084W PIB1Q06651 286 aa4.82□□□□□ -1.64
BRO1YPL084W LEU3P08638 886 aa4.81□□□□□ -1.64
BRO1YPL084W YAP5P40574 245 aa4.81□□□□□ -1.64
BRO1YPL084W NSR1P27476 414 aaKnown RBP RIP-Chip data4.8□□□□□ -1.64not detected
BRO1YPL084W SPB4P25808 606 aaPredicted RBP4.79□□□□□ -1.64
BRO1YPL084W CKB1P43639 278 aa4.79□□□□□ -1.64
BRO1YPL084W EDS1P38073 919 aa4.79□□□□□ -1.64
BRO1YPL084W NOP53Q12080 455 aaKnown RBP4.77□□□□□ -1.65
BRO1YPL084W PTC3P34221 468 aaKnown RBP4.75□□□□□ -1.65
BRO1YPL084W VMA1P17255 1071 aaKnown RBP4.74□□□□□ -1.65
BRO1YPL084W PBS2P08018 668 aa4.72□□□□□ -1.65
BRO1YPL084W MST1P07236 462 aa4.71□□□□□ -1.66
BRO1YPL084W DSF2P38213 736 aa4.7□□□□□ -1.66
BRO1YPL084W REF2P42073 533 aaPredicted RBP4.7□□□□□ -1.66
BRO1YPL084W RPN1P38764 993 aaKnown RBP4.69□□□□□ -1.66
BRO1YPL084W GTT3P39996 337 aa4.69□□□□□ -1.66
BRO1YPL084W ATH1P48016 1211 aa4.68□□□□□ -1.66
BRO1YPL084W GRE2Q12068 342 aaKnown RBP4.68□□□□□ -1.66
BRO1YPL084W SAM3Q08986 587 aa4.67□□□□□ -1.66
BRO1YPL084W GUT1P32190 709 aa4.66□□□□□ -1.66
BRO1YPL084W TAF7Q05021 590 aa4.66□□□□□ -1.66
BRO1YPL084W MAM3Q12296 706 aa4.66□□□□□ -1.66
BRO1YPL084W GYP5Q12344 894 aa4.66□□□□□ -1.66
BRO1YPL084W VHR2P40041 505 aa4.64□□□□□ -1.67
BRO1YPL084W COX6P00427 148 aa4.63□□□□□ -1.67
BRO1YPL084W IES2P40154 320 aa4.63□□□□□ -1.67
BRO1YPL084W SET4P42948 560 aa4.63□□□□□ -1.67
BRO1YPL084W YOL036WQ08206 761 aa4.63□□□□□ -1.67
BRO1YPL084W DCW1P36091 449 aa4.62□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms