RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W HSM3P38348 480 aa1.31□□□□□ -2.2
CTK3YML112W SHC1P39000 512 aa1.31□□□□□ -2.2
CTK3YML112W NPT1P39683 429 aaKnown RBP1.31□□□□□ -2.2
CTK3YML112W TIF34P40217 347 aaKnown RBP1.31□□□□□ -2.2
CTK3YML112W LSB1P53281 241 aa1.31□□□□□ -2.2
CTK3YML112W PRO2P54885 456 aaKnown RBP1.31□□□□□ -2.2
CTK3YML112W BCP1Q06338 283 aa1.31□□□□□ -2.2
CTK3YML112W RRT8Q08219 342 aa1.31□□□□□ -2.2
CTK3YML112W YOR268CQ08734 132 aa1.31□□□□□ -2.2
CTK3YML112W BOL1Q3E793 110 aa1.31□□□□□ -2.2
CTK3YML112W DBP3P20447 523 aaKnown RBP1.3□□□□□ -2.2
CTK3YML112W TOM40P23644 387 aaKnown RBP1.3□□□□□ -2.2
CTK3YML112W RPT5P33297 434 aaKnown RBP1.3□□□□□ -2.2
CTK3YML112W HMT1P38074 348 aa1.3□□□□□ -2.2
CTK3YML112W BFR1P38934 470 aaKnown RBP RIP-Chip data1.3□□□□□ -2.2not detected
CTK3YML112W FCY21P40039 528 aa1.3□□□□□ -2.2
CTK3YML112W IBA57P47158 497 aa1.3□□□□□ -2.2
CTK3YML112W PEX31P53203 462 aa1.3□□□□□ -2.2
CTK3YML112W YNL260CP53846 198 aa1.3□□□□□ -2.2
CTK3YML112W FMP41P53889 259 aaKnown RBP1.3□□□□□ -2.2
CTK3YML112W TRM44Q02648 567 aaKnown RBP1.3□□□□□ -2.2
CTK3YML112W RRN5Q02983 363 aa1.3□□□□□ -2.2
CTK3YML112W PRM15Q03262 622 aa1.3□□□□□ -2.2
CTK3YML112W ARR2Q06597 130 aa1.3□□□□□ -2.2
CTK3YML112W GIS3Q12418 502 aa1.3□□□□□ -2.2
CTK3YML112W YBL112CQ3E7Y4 105 aa1.3□□□□□ -2.2
CTK3YML112W YOS9Q99220 542 aa1.3□□□□□ -2.2
CTK3YML112W FKS1P38631 1876 aaKnown RBP1.29□□□□□ -2.2
CTK3YML112W RPS3P05750 240 aaKnown RBP1.29□□□□□ -2.2
CTK3YML112W RPB4P20433 221 aaPredicted RBP1.29□□□□□ -2.2
CTK3YML112W CWP1P28319 239 aa1.29□□□□□ -2.2
CTK3YML112W SCM4P32564 187 aa1.29□□□□□ -2.2
CTK3YML112W DOA4P32571 926 aa1.29□□□□□ -2.2
CTK3YML112W ARC19P33204 171 aaKnown RBP1.29□□□□□ -2.2
CTK3YML112W YUH1P35127 236 aa1.29□□□□□ -2.2
CTK3YML112W YOR062CP36025 268 aa1.29□□□□□ -2.2
CTK3YML112W MRX5P47007 382 aa1.29□□□□□ -2.2
CTK3YML112W ASI3P53983 676 aa1.29□□□□□ -2.2
CTK3YML112W EBS1Q03466 884 aaKnown RBP1.29□□□□□ -2.2
CTK3YML112W PEX12Q04370 399 aa1.29□□□□□ -2.2
CTK3YML112W BOP2Q06150 570 aa1.29□□□□□ -2.2
CTK3YML112W SFH1Q06168 426 aa1.29□□□□□ -2.2
CTK3YML112W RUD3Q12234 484 aaKnown RBP1.29□□□□□ -2.2
CTK3YML112W MRPL23Q12487 163 aaPredicted RBP1.29□□□□□ -2.2
CTK3YML112W MHT1Q12525 324 aa1.29□□□□□ -2.2
CTK3YML112W RPL4AP10664 362 aaKnown RBP1.28□□□□□ -2.2
CTK3YML112W APA2P22108 325 aa1.28□□□□□ -2.2
CTK3YML112W ASF2P32448 525 aaPredicted RBP1.28□□□□□ -2.2
CTK3YML112W MSN4P33749 630 aa1.28□□□□□ -2.2
CTK3YML112W YKT6P36015 200 aaKnown RBP1.28□□□□□ -2.2
CTK3YML112W YJL027CP47063 138 aaPredicted RBP1.28□□□□□ -2.2
CTK3YML112W RPL4BP49626 362 aaKnown RBP1.28□□□□□ -2.2
CTK3YML112W NUP84P52891 726 aa1.28□□□□□ -2.2
CTK3YML112W YNL050CP53952 270 aa1.28□□□□□ -2.2
CTK3YML112W SNZ1Q03148 297 aa1.28□□□□□ -2.2
CTK3YML112W SDC1Q03323 175 aa1.28□□□□□ -2.2
CTK3YML112W PEX10Q05568 337 aa1.28□□□□□ -2.2
CTK3YML112W ATG38Q05789 226 aaKnown RBP1.28□□□□□ -2.2
CTK3YML112W CUR1Q06469 252 aa1.28□□□□□ -2.2
CTK3YML112W NOT5Q12514 560 aaPredicted RBP1.28□□□□□ -2.2
CTK3YML112W SAS5Q99314 248 aa1.28□□□□□ -2.2
CTK3YML112W CFT1Q06632 1357 aaKnown RBP1.27□□□□□ -2.21
CTK3YML112W IKI3Q06706 1349 aaKnown RBP1.27□□□□□ -2.21
CTK3YML112W CDC36P06100 191 aaPredicted RBP1.27□□□□□ -2.21
CTK3YML112W UGA1P17649 471 aa1.27□□□□□ -2.21
CTK3YML112W YSR3P23501 404 aa1.27□□□□□ -2.21
CTK3YML112W MGM101P32787 269 aaKnown RBP1.27□□□□□ -2.21
CTK3YML112W MRPL40P36534 297 aa1.27□□□□□ -2.21
CTK3YML112W PEX18P38855 283 aa1.27□□□□□ -2.21
CTK3YML112W VPS45P38932 577 aa1.27□□□□□ -2.21
CTK3YML112W YJL028WP47062 111 aa1.27□□□□□ -2.21
CTK3YML112W YGL185CP53100 379 aa1.27□□□□□ -2.21
CTK3YML112W ARP5P53946 755 aa1.27□□□□□ -2.21
CTK3YML112W CWC21Q03375 135 aaKnown RBP1.27□□□□□ -2.21
CTK3YML112W KAP95Q06142 861 aaKnown RBP1.27□□□□□ -2.21
CTK3YML112W GEP5Q12393 293 aa1.27□□□□□ -2.21
CTK3YML112W YPL247CQ12523 523 aa1.27□□□□□ -2.21
CTK3YML112W YIL002W-AQ3E7Z5 69 aa1.27□□□□□ -2.21
CTK3YML112W YCR102CP25608 368 aa1.26□□□□□ -2.21
CTK3YML112W NTG1P31378 399 aa1.26□□□□□ -2.21
CTK3YML112W GDH2P33327 1092 aaKnown RBP1.26□□□□□ -2.21
CTK3YML112W KDX1P36005 433 aa1.26□□□□□ -2.21
CTK3YML112W MRPL37P36532 105 aa1.26□□□□□ -2.21
CTK3YML112W SSH1P38353 490 aaKnown RBP1.26□□□□□ -2.21
CTK3YML112W PRM9P39551 298 aa1.26□□□□□ -2.21
CTK3YML112W LSM4P40070 187 aaKnown RBP1.26□□□□□ -2.21
CTK3YML112W SNX4P47057 423 aa1.26□□□□□ -2.21
CTK3YML112W PNC1P53184 216 aaKnown RBP1.26□□□□□ -2.21
CTK3YML112W CAB4P53332 305 aa1.26□□□□□ -2.21
CTK3YML112W RTC4P53850 401 aa1.26□□□□□ -2.21
CTK3YML112W YNL134CP53912 376 aaKnown RBP1.26□□□□□ -2.21
CTK3YML112W SPO19Q03029 223 aa1.26□□□□□ -2.21
CTK3YML112W YOL107WQ12239 342 aa1.26□□□□□ -2.21
CTK3YML112W ADF1Q2V2Q1 113 aa1.26□□□□□ -2.21
CTK3YML112W CCA1P21269 546 aa1.25□□□□□ -2.21
CTK3YML112W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.25□□□□□ -2.21not detected
CTK3YML112W ECM4P36156 370 aa1.25□□□□□ -2.21
CTK3YML112W HEK2P38199 381 aaKnown RBP RIP-Chip data1.25□□□□□ -2.21 RIP-Chip
CTK3YML112W YHB1P39676 399 aaKnown RBP1.25□□□□□ -2.21
CTK3YML112W LOC1P43586 204 aaPredicted RBP1.25□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 24 ms