Protein–RNA interactions for Protein: P23501

YSR3, Dihydrosphingosine 1-phosphate phosphatase YSR3, yeastyeast

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YSR3P23501 YML009W-BYML009W-B 477 nt20.16■□□□□ 0.82
YSR3P23501 NSR1YGR159C 1245 nt19.86■□□□□ 0.77
YSR3P23501 NOP1YDL014W 984 nt19.57■□□□□ 0.72
YSR3P23501 YKL036CYKL036C 393 nt18.17■□□□□ 0.5
YSR3P23501 MDJ1YFL016C 1536 nt17.64■□□□□ 0.41
YSR3P23501 Q0297Q0297 156 nt17.15■□□□□ 0.34
YSR3P23501 SRX1YKL086W 384 nt17.1■□□□□ 0.33
YSR3P23501 YJL027CYJL027C 417 nt17.01■□□□□ 0.31
YSR3P23501 SCS3YGL126W 1143 nt16.61■□□□□ 0.25
YSR3P23501 YCR051WYCR051W 669 nt16.3■□□□□ 0.2
YSR3P23501 YOL085CYOL085C 342 nt15.75■□□□□ 0.11
YSR3P23501 DBP2YNL112W 1641 nt15.6■□□□□ 0.09
YSR3P23501 PKP1YIL042C 1185 nt15.56■□□□□ 0.08
YSR3P23501 TRN1tP(UGG)A 72 nt15.42■□□□□ 0.06
YSR3P23501 SUF9tP(UGG)F 72 nt15.42■□□□□ 0.06
YSR3P23501 SUF8tP(UGG)H 72 nt15.42■□□□□ 0.06
YSR3P23501 tP(UGG)LtP(UGG)L 72 nt15.42■□□□□ 0.06
YSR3P23501 SUF7tP(UGG)M 72 nt15.42■□□□□ 0.06
YSR3P23501 tP(UGG)N1tP(UGG)N1 72 nt15.42■□□□□ 0.06
YSR3P23501 tP(UGG)N2tP(UGG)N2 72 nt15.42■□□□□ 0.06
YSR3P23501 tP(UGG)O1tP(UGG)O1 72 nt15.42■□□□□ 0.06
YSR3P23501 SUF11tP(UGG)O2 72 nt15.42■□□□□ 0.06
YSR3P23501 RPP1BYDL130W 321 nt15.41■□□□□ 0.06
YSR3P23501 CCC1YLR220W 969 nt15.34■□□□□ 0.05
YSR3P23501 YBR190WYBR190W 312 nt14.94□□□□□ -0.02
YSR3P23501 ATS1YAL020C 1002 nt14.87□□□□□ -0.03
YSR3P23501 PET122YER153C 765 nt14.75□□□□□ -0.05
YSR3P23501 SCJ1YMR214W 1134 nt14.74□□□□□ -0.05
YSR3P23501 RTC3YHR087W 336 nt14.69□□□□□ -0.06
YSR3P23501 RVS167YDR388W 1449 nt14.68□□□□□ -0.06
YSR3P23501 tP(UGG)O3tP(UGG)O3 72 nt14.63□□□□□ -0.07
YSR3P23501 SCR1SCR1 522 nt14.59□□□□□ -0.07
YSR3P23501 RRN5YLR141W 1092 nt14.33□□□□□ -0.12
YSR3P23501 SHR5YOL110W 714 nt14.19□□□□□ -0.14
YSR3P23501 YDJ1YNL064C 1230 nt14.11□□□□□ -0.15
YSR3P23501 RSB1YOR049C 1065 nt14.09□□□□□ -0.15
YSR3P23501 YER088W-BYER088W-B 147 nt14.04□□□□□ -0.16
YSR3P23501 GAR1YHR089C 618 nt13.86□□□□□ -0.19
YSR3P23501 DEP1YAL013W 1218 nt13.84□□□□□ -0.19
YSR3P23501 URN1YPR152C 1398 nt13.76□□□□□ -0.21
YSR3P23501 PST2YDR032C 597 nt13.73□□□□□ -0.21
YSR3P23501 YNL208WYNL208W 600 nt13.55□□□□□ -0.24
YSR3P23501 RPN10YHR200W 807 nt13.54□□□□□ -0.24
YSR3P23501 OPI9YLR338W 858 nt13.51□□□□□ -0.25
YSR3P23501 PUT4YOR348C 1884 nt13.5□□□□□ -0.25
YSR3P23501 SAH1YER043C 1350 nt13.45□□□□□ -0.26
YSR3P23501 TIR1YER011W 765 nt13.35□□□□□ -0.27
YSR3P23501 ARE1YCR048W 1833 nt13.3□□□□□ -0.28
YSR3P23501 YKL097CYKL097C 411 nt13.26□□□□□ -0.29
YSR3P23501 SHU1YHL006C 453 nt13.19□□□□□ -0.3
YSR3P23501 SSA1YAL005C 1929 nt13.19□□□□□ -0.3
YSR3P23501 YHR049C-AYHR049C-A 297 nt13.16□□□□□ -0.3
YSR3P23501 POA1YBR022W 534 nt13.13□□□□□ -0.31
YSR3P23501 YJR018WYJR018W 363 nt13.12□□□□□ -0.31
YSR3P23501 PUN1YLR414C 792 nt13.11□□□□□ -0.31
YSR3P23501 SRB2YHR041C 633 nt13.02□□□□□ -0.33
YSR3P23501 YAL037C-BYAL037C-B 975 nt13.01□□□□□ -0.33
YSR3P23501 PTC2YER089C 1395 nt12.98□□□□□ -0.33
YSR3P23501 YJR120WYJR120W 351 nt12.95□□□□□ -0.34
YSR3P23501 BUD23YCR047C 828 nt12.9□□□□□ -0.34
YSR3P23501 RPP2BYDR382W 333 nt12.88□□□□□ -0.35
YSR3P23501 BSC6YOL137W 1494 nt12.81□□□□□ -0.36
YSR3P23501 WWM1YFL010C 636 nt12.81□□□□□ -0.36
YSR3P23501 NAB2YGL122C 1578 nt12.75□□□□□ -0.37
YSR3P23501 YOR139CYOR139C 393 nt12.73□□□□□ -0.37
YSR3P23501 MNP1YGL068W 585 nt12.71□□□□□ -0.37
YSR3P23501 YGR021WYGR021W 873 nt12.71□□□□□ -0.37
YSR3P23501 HOM6YJR139C 1080 nt12.69□□□□□ -0.38
YSR3P23501 FPR4YLR449W 1179 nt12.66□□□□□ -0.38
YSR3P23501 DAL1YIR027C 1383 nt12.62□□□□□ -0.39
YSR3P23501 BDH2YAL061W 1254 nt12.62□□□□□ -0.39
YSR3P23501 INM2YDR287W 879 nt12.61□□□□□ -0.39
YSR3P23501 FIS1YIL065C 468 nt12.61□□□□□ -0.39
YSR3P23501 NPL3YDR432W 1245 nt12.6□□□□□ -0.39
YSR3P23501 SSA3YBL075C 1950 nt12.56□□□□□ -0.4
YSR3P23501 YFL021C-AYFL021C-A 855 nt12.55□□□□□ -0.4
YSR3P23501 YBL100CYBL100C 315 nt12.55□□□□□ -0.4
YSR3P23501 PHO4YFR034C 939 nt12.52□□□□□ -0.41
YSR3P23501 RKM5YLR137W 1104 nt12.51□□□□□ -0.41
YSR3P23501 LSM3YLR438C-A 270 nt12.46□□□□□ -0.41
YSR3P23501 YOL037CYOL037C 354 nt12.45□□□□□ -0.42
YSR3P23501 FUN26YAL022C 1554 nt12.4□□□□□ -0.42
YSR3P23501 TRM9YML014W 840 nt12.38□□□□□ -0.43
YSR3P23501 CCT6YDR188W 1641 nt12.22□□□□□ -0.45
YSR3P23501 YPS1YLR120C 1710 nt12.21□□□□□ -0.45
YSR3P23501 tM(CAU)CtM(CAU)C 72 nt12.21□□□□□ -0.45
YSR3P23501 IMT4tM(CAU)E 72 nt12.21□□□□□ -0.45
YSR3P23501 IMT3tM(CAU)J3 72 nt12.21□□□□□ -0.45
YSR3P23501 IMT1tM(CAU)O1 72 nt12.21□□□□□ -0.45
YSR3P23501 IMT2tM(CAU)P 72 nt12.21□□□□□ -0.45
YSR3P23501 ALF1YNL148C 765 nt12.2□□□□□ -0.46
YSR3P23501 YLR281CYLR281C 468 nt12.18□□□□□ -0.46
YSR3P23501 YDR095CYDR095C 411 nt12.15□□□□□ -0.46
YSR3P23501 WHI5YOR083W 888 nt12.15□□□□□ -0.46
YSR3P23501 PUS2YGL063W 1113 nt12.12□□□□□ -0.47
YSR3P23501 SUF2tP(AGG)C 72 nt12.12□□□□□ -0.47
YSR3P23501 SUF10tP(AGG)N 72 nt12.12□□□□□ -0.47
YSR3P23501 YHR165W-AYHR165W-A 312 nt12.11□□□□□ -0.47
YSR3P23501 YLR154C-GYLR154C-G 150 nt12.04□□□□□ -0.48
YSR3P23501 SPT5YML010W 3192 nt12.04□□□□□ -0.48
Retrieved 100 of 7,029 protein–RNA pairs in 7.4 ms