RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	ZTA1	P38230	334 aa	Known RBP	3.16	□□□□□ -1.9
TPM1	YNL079C	TRM7	P38238	310 aa	Known RBP	3.16	□□□□□ -1.9
TPM1	YNL079C	YHR177W	P38867	453 aa		3.16	□□□□□ -1.9
TPM1	YNL079C	PCF11	P39081	626 aa	Predicted RBP	3.16	□□□□□ -1.9
TPM1	YNL079C	COG3	P40094	801 aa		3.16	□□□□□ -1.9
TPM1	YNL079C	PRE6	P40303	254 aa	Known RBP	3.16	□□□□□ -1.9
TPM1	YNL079C	OST1	P41543	476 aa	Known RBP	3.16	□□□□□ -1.9
TPM1	YNL079C	YGR201C	P42936	225 aa		3.16	□□□□□ -1.9
TPM1	YNL079C	STE24	P47154	453 aa		3.16	□□□□□ -1.9
TPM1	YNL079C	PAC10	P48363	199 aa		3.16	□□□□□ -1.9
TPM1	YNL079C	COQ5	P49017	307 aa		3.16	□□□□□ -1.9
TPM1	YNL079C	ROG1	P53118	685 aa		3.16	□□□□□ -1.9
TPM1	YNL079C	PRM8	P53174	237 aa		3.16	□□□□□ -1.9
TPM1	YNL079C	DCS1	Q06151	350 aa		3.16	□□□□□ -1.9
TPM1	YNL079C	YDL114W	Q07530	308 aa		3.16	□□□□□ -1.9
TPM1	YNL079C	SKI7	Q08491	747 aa	Predicted RBP	3.16	□□□□□ -1.9
TPM1	YNL079C	YOR114W	Q12219	294 aa		3.16	□□□□□ -1.9
TPM1	YNL079C	PST2	Q12335	198 aa	Known RBP	3.16	□□□□□ -1.9
TPM1	YNL079C	IES3	Q12345	250 aa		3.16	□□□□□ -1.9
TPM1	YNL079C	TRM10	Q12400	293 aa		3.16	□□□□□ -1.9
TPM1	YNL079C	MRX4	Q12467	430 aa		3.16	□□□□□ -1.9
TPM1	YNL079C	YPR064W	Q12492	139 aa		3.16	□□□□□ -1.9
TPM1	YNL079C	REP1	P03871	373 aa		3.15	□□□□□ -1.91
TPM1	YNL079C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	not detected
TPM1	YNL079C	RRP7	P25368	297 aa	Predicted RBP	3.15	□□□□□ -1.91
TPM1	YNL079C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	not detected
TPM1	YNL079C	MKK1	P32490	508 aa		3.15	□□□□□ -1.91
TPM1	YNL079C	SFC1	P33303	322 aa		3.15	□□□□□ -1.91
TPM1	YNL079C	NUF2	P33895	451 aa		3.15	□□□□□ -1.91
TPM1	YNL079C	TPO5	P36029	618 aa		3.15	□□□□□ -1.91
TPM1	YNL079C	FES1	P38260	290 aa		3.15	□□□□□ -1.91
TPM1	YNL079C	YAL037W	P39728	267 aa		3.15	□□□□□ -1.91
TPM1	YNL079C	AST2	P39945	430 aa	Known RBP	3.15	□□□□□ -1.91
TPM1	YNL079C	SOK1	P40317	901 aa		3.15	□□□□□ -1.91
TPM1	YNL079C	LYS12	P40495	371 aa	Known RBP	3.15	□□□□□ -1.91
TPM1	YNL079C	YIL067C	P40514	678 aa		3.15	□□□□□ -1.91
TPM1	YNL079C	RAD17	P48581	401 aa		3.15	□□□□□ -1.91
TPM1	YNL079C	PXR1	P53335	271 aa	Predicted RBP	3.15	□□□□□ -1.91
TPM1	YNL079C	OCA2	P53949	197 aa		3.15	□□□□□ -1.91
TPM1	YNL079C	HXT11	P54862	567 aa		3.15	□□□□□ -1.91
TPM1	YNL079C	RRP17	Q04031	235 aa	Predicted RBP	3.15	□□□□□ -1.91
TPM1	YNL079C	RRN11	Q04712	507 aa		3.15	□□□□□ -1.91
TPM1	YNL079C	RRP40	Q08285	240 aa	Known RBP	3.15	□□□□□ -1.91
TPM1	YNL079C	SRO7	Q12038	1033 aa		3.15	□□□□□ -1.91
TPM1	YNL079C	MED2	Q12124	431 aa		3.15	□□□□□ -1.91
TPM1	YNL079C	YLR108C	Q12259	485 aa		3.15	□□□□□ -1.91
TPM1	YNL079C	ERP4	Q12450	207 aa		3.15	□□□□□ -1.91
TPM1	YNL079C	RPC40	P07703	335 aa	Known RBP	3.14	□□□□□ -1.91
TPM1	YNL079C	ZWF1	P11412	505 aa	Known RBP	3.14	□□□□□ -1.91
TPM1	YNL079C	PET9	P18239	318 aa	Known RBP	3.14	□□□□□ -1.91
TPM1	YNL079C	SPO7	P18410	259 aa		3.14	□□□□□ -1.91
TPM1	YNL079C	IDP1	P21954	428 aa	Known RBP	3.14	□□□□□ -1.91
TPM1	YNL079C	CPR4	P25334	318 aa		3.14	□□□□□ -1.91
TPM1	YNL079C	DOA1	P36037	715 aa		3.14	□□□□□ -1.91
TPM1	YNL079C	YBR139W	P38109	508 aa		3.14	□□□□□ -1.91
TPM1	YNL079C	ARN2	P38724	620 aa		3.14	□□□□□ -1.91
TPM1	YNL079C	BIG1	P38813	335 aa		3.14	□□□□□ -1.91
TPM1	YNL079C	RCY1	P39531	840 aa		3.14	□□□□□ -1.91
TPM1	YNL079C	AIM2	P39721	246 aa		3.14	□□□□□ -1.91
TPM1	YNL079C	SER3	P40054	469 aa		3.14	□□□□□ -1.91
TPM1	YNL079C	RRG9	P40156	214 aa		3.14	□□□□□ -1.91
TPM1	YNL079C	PAC11	P40960	533 aa		3.14	□□□□□ -1.91
TPM1	YNL079C	YPI1	P43587	155 aa		3.14	□□□□□ -1.91
TPM1	YNL079C	EFM3	P47163	339 aa		3.14	□□□□□ -1.91
TPM1	YNL079C	YGR168C	P53293	376 aa		3.14	□□□□□ -1.91
TPM1	YNL079C	GPI15	P53961	229 aa		3.14	□□□□□ -1.91
TPM1	YNL079C	RHO3	Q00245	231 aa	Known RBP	3.14	□□□□□ -1.91
TPM1	YNL079C	GRX5	Q02784	150 aa		3.14	□□□□□ -1.91
TPM1	YNL079C	YMR181C	Q03231	154 aa		3.14	□□□□□ -1.91
TPM1	YNL079C	YMD8	Q03697	442 aa		3.14	□□□□□ -1.91
TPM1	YNL079C	GPI17	Q04080	534 aa		3.14	□□□□□ -1.91
TPM1	YNL079C	KRE28	Q04431	385 aa		3.14	□□□□□ -1.91
TPM1	YNL079C	GAL83	Q04739	417 aa		3.14	□□□□□ -1.91
TPM1	YNL079C	RNH1	Q04740	348 aa		3.14	□□□□□ -1.91
TPM1	YNL079C	YMR310C	Q04867	317 aa	Predicted RBP	3.14	□□□□□ -1.91
TPM1	YNL079C	NEJ1	Q06148	342 aa		3.14	□□□□□ -1.91
TPM1	YNL079C	DCI1	Q08558	271 aa		3.14	□□□□□ -1.91
TPM1	YNL079C	RPN8	Q08723	338 aa	Known RBP	3.14	□□□□□ -1.91
TPM1	YNL079C	NFI1	Q12216	726 aa		3.14	□□□□□ -1.91
TPM1	YNL079C	YGK3	Q12222	375 aa	Predicted RBP	3.14	□□□□□ -1.91
TPM1	YNL079C	ERV2	Q12284	196 aa		3.14	□□□□□ -1.91
TPM1	YNL079C	COX3	P00420	269 aa		3.13	□□□□□ -1.91
TPM1	YNL079C	HOM3	P10869	527 aa		3.13	□□□□□ -1.91
TPM1	YNL079C	TFS1	P14306	219 aa		3.13	□□□□□ -1.91
TPM1	YNL079C	ARO3	P14843	370 aa	Known RBP	3.13	□□□□□ -1.91
TPM1	YNL079C	PPH21	P23594	369 aa		3.13	□□□□□ -1.91
TPM1	YNL079C	RAD51	P25454	400 aa		3.13	□□□□□ -1.91
TPM1	YNL079C	ASF2	P32448	525 aa	Predicted RBP	3.13	□□□□□ -1.91
TPM1	YNL079C	YBR137W	P38276	179 aa		3.13	□□□□□ -1.91
TPM1	YNL079C	RRP4	P38792	359 aa	Known RBP	3.13	□□□□□ -1.91
TPM1	YNL079C	SBE22	P38814	852 aa		3.13	□□□□□ -1.91
TPM1	YNL079C	PFS1	P38872	237 aa		3.13	□□□□□ -1.91
TPM1	YNL079C	BAT1	P38891	393 aa	Known RBP	3.13	□□□□□ -1.91
TPM1	YNL079C	DDI1	P40087	428 aa		3.13	□□□□□ -1.91
TPM1	YNL079C	JLP2	P40206	208 aa		3.13	□□□□□ -1.91
TPM1	YNL079C	AIM20	P40451	204 aa		3.13	□□□□□ -1.91
TPM1	YNL079C	NQM1	P53228	333 aa	Predicted RBP	3.13	□□□□□ -1.91
TPM1	YNL079C	TPS1	Q00764	495 aa	Known RBP	3.13	□□□□□ -1.91
TPM1	YNL079C	NUP49	Q02199	472 aa		3.13	□□□□□ -1.91
TPM1	YNL079C	YKR005C	Q02203	525 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 58.8 ms