RNA–Protein interactions for RNA: YPL087W

YDC1, Transcript of Alkaline dihydroceramidase, involved in sphingolipid metabolism, yeast

Gene YDC1, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDC1	YPL087W	RRT8	Q08219	342 aa		4.1	□□□□□ -1.75
YDC1	YPL087W	RPN5	Q12250	445 aa	Known RBP	4.1	□□□□□ -1.75
YDC1	YPL087W	MHF1	Q3E835	90 aa		4.1	□□□□□ -1.75
YDC1	YPL087W	STE3	P06783	470 aa		4.09	□□□□□ -1.75
YDC1	YPL087W	GRR1	P24814	1151 aa		4.09	□□□□□ -1.75
YDC1	YPL087W	CTR86	P25355	563 aa		4.09	□□□□□ -1.75
YDC1	YPL087W	GEX1	P25596	615 aa		4.09	□□□□□ -1.75
YDC1	YPL087W	CYS4	P32582	507 aa	Known RBP	4.09	□□□□□ -1.75
YDC1	YPL087W	YEL045C	P32616	141 aa		4.09	□□□□□ -1.75
YDC1	YPL087W	MNS1	P32906	549 aa		4.09	□□□□□ -1.75
YDC1	YPL087W	PXA2	P34230	853 aa		4.09	□□□□□ -1.75
YDC1	YPL087W	SOR1	P35497	357 aa	Known RBP	4.09	□□□□□ -1.75
YDC1	YPL087W	RIB1	P38066	345 aa		4.09	□□□□□ -1.75
YDC1	YPL087W	SIF2	P38262	535 aa		4.09	□□□□□ -1.75
YDC1	YPL087W	PEX18	P38855	283 aa		4.09	□□□□□ -1.75
YDC1	YPL087W	DDI1	P40087	428 aa		4.09	□□□□□ -1.75
YDC1	YPL087W	ATP22	P50273	684 aa	Predicted RBP	4.09	□□□□□ -1.75
YDC1	YPL087W	MPS2	P53159	387 aa		4.09	□□□□□ -1.75
YDC1	YPL087W	NQM1	P53228	333 aa	Predicted RBP	4.09	□□□□□ -1.75
YDC1	YPL087W	CIK1	Q01649	594 aa		4.09	□□□□□ -1.75
YDC1	YPL087W	PEX25	Q02969	394 aa		4.09	□□□□□ -1.75
YDC1	YPL087W	GAL83	Q04739	417 aa		4.09	□□□□□ -1.75
YDC1	YPL087W	YHC1	Q05900	231 aa	Known RBP	4.09	□□□□□ -1.75
YDC1	YPL087W	HRI1	Q05905	244 aa	Known RBP	4.09	□□□□□ -1.75
YDC1	YPL087W	DCS1	Q06151	350 aa		4.09	□□□□□ -1.75
YDC1	YPL087W	NDE2	Q07500	545 aa		4.09	□□□□□ -1.75
YDC1	YPL087W	SOR2	Q07786	357 aa		4.09	□□□□□ -1.75
YDC1	YPL087W	YLR046C	Q12253	270 aa		4.09	□□□□□ -1.75
YDC1	YPL087W	SFM1	Q12314	213 aa		4.09	□□□□□ -1.75
YDC1	YPL087W	JLP1	Q12358	412 aa		4.09	□□□□□ -1.75
YDC1	YPL087W	ISA2	Q12425	185 aa		4.09	□□□□□ -1.75
YDC1	YPL087W	LDB16	P25587	256 aa		4.08	□□□□□ -1.76
YDC1	YPL087W	ASF2	P32448	525 aa	Predicted RBP	4.08	□□□□□ -1.76
YDC1	YPL087W	TPO5	P36029	618 aa		4.08	□□□□□ -1.76
YDC1	YPL087W	EGD2	P38879	174 aa	Known RBP	4.08	□□□□□ -1.76
YDC1	YPL087W	YAL037W	P39728	267 aa		4.08	□□□□□ -1.76
YDC1	YPL087W	YRB2	P40517	327 aa		4.08	□□□□□ -1.76
YDC1	YPL087W	YJR149W	P47177	404 aa		4.08	□□□□□ -1.76
YDC1	YPL087W	ZRG17	P53735	605 aa		4.08	□□□□□ -1.76
YDC1	YPL087W	CWC25	P53854	179 aa	Known RBP	4.08	□□□□□ -1.76
YDC1	YPL087W	GPI15	P53961	229 aa		4.08	□□□□□ -1.76
YDC1	YPL087W	HXT11	P54862	567 aa		4.08	□□□□□ -1.76
YDC1	YPL087W	SED5	Q01590	340 aa		4.08	□□□□□ -1.76
YDC1	YPL087W	YKR005C	Q02203	525 aa		4.08	□□□□□ -1.76
YDC1	YPL087W	TLG1	Q03322	224 aa		4.08	□□□□□ -1.76
YDC1	YPL087W	YMR010W	Q03687	405 aa		4.08	□□□□□ -1.76
YDC1	YPL087W	GRX3	Q03835	250 aa		4.08	□□□□□ -1.76
YDC1	YPL087W	RRP17	Q04031	235 aa	Predicted RBP	4.08	□□□□□ -1.76
YDC1	YPL087W	SMP3	Q04174	516 aa		4.08	□□□□□ -1.76
YDC1	YPL087W	URC2	Q04411	772 aa		4.08	□□□□□ -1.76
YDC1	YPL087W	ERB1	Q04660	807 aa	Known RBP	4.08	□□□□□ -1.76
YDC1	YPL087W	NEJ1	Q06148	342 aa		4.08	□□□□□ -1.76
YDC1	YPL087W	RRG7	Q08774	242 aa	Predicted RBP	4.08	□□□□□ -1.76
YDC1	YPL087W	YPQ1	Q12010	308 aa		4.08	□□□□□ -1.76
YDC1	YPL087W	TRM10	Q12400	293 aa		4.08	□□□□□ -1.76
YDC1	YPL087W	SRN2	Q99176	213 aa		4.08	□□□□□ -1.76
YDC1	YPL087W	MDM35	O60200	86 aa		4.07	□□□□□ -1.76
YDC1	YPL087W	RHO1	P06780	209 aa	Known RBP	4.07	□□□□□ -1.76
YDC1	YPL087W	ARF2	P19146	181 aa	Known RBP	4.07	□□□□□ -1.76
YDC1	YPL087W	DBP3	P20447	523 aa	Known RBP	4.07	□□□□□ -1.76
YDC1	YPL087W	EPT1	P22140	391 aa		4.07	□□□□□ -1.76
YDC1	YPL087W	MTW1	P39731	289 aa		4.07	□□□□□ -1.76
YDC1	YPL087W	HEM14	P40012	539 aa		4.07	□□□□□ -1.76
YDC1	YPL087W	KRE29	P40026	464 aa		4.07	□□□□□ -1.76
YDC1	YPL087W	AIM20	P40451	204 aa		4.07	□□□□□ -1.76
YDC1	YPL087W	YJL055W	P47044	245 aa		4.07	□□□□□ -1.76
YDC1	YPL087W	YPT32	P51996	222 aa	Known RBP	4.07	□□□□□ -1.76
YDC1	YPL087W	FLC3	P53121	802 aa		4.07	□□□□□ -1.76
YDC1	YPL087W	YGR015C	P53208	328 aa		4.07	□□□□□ -1.76
YDC1	YPL087W	YPL107W	Q02873	248 aa		4.07	□□□□□ -1.76
YDC1	YPL087W	GLE1	Q12315	538 aa		4.07	□□□□□ -1.76
YDC1	YPL087W	YDL199C	Q12407	687 aa		4.07	□□□□□ -1.76
YDC1	YPL087W	MSB2	P32334	1306 aa		4.06	□□□□□ -1.76
YDC1	YPL087W	DAP2	P18962	818 aa		4.06	□□□□□ -1.76
YDC1	YPL087W	RRP7	P25368	297 aa	Predicted RBP	4.06	□□□□□ -1.76
YDC1	YPL087W	PEX34	P25584	144 aa		4.06	□□□□□ -1.76
YDC1	YPL087W	UBC8	P28263	218 aa		4.06	□□□□□ -1.76
YDC1	YPL087W	ITR1	P30605	584 aa		4.06	□□□□□ -1.76
YDC1	YPL087W	NUP2	P32499	720 aa		4.06	□□□□□ -1.76
YDC1	YPL087W	GDH2	P33327	1092 aa	Known RBP	4.06	□□□□□ -1.76
YDC1	YPL087W	ECM8	P38246	354 aa		4.06	□□□□□ -1.76
YDC1	YPL087W	RCK1	P38622	512 aa		4.06	□□□□□ -1.76
YDC1	YPL087W	APE4	P38821	490 aa		4.06	□□□□□ -1.76
YDC1	YPL087W	IPT1	P38954	527 aa		4.06	□□□□□ -1.76
YDC1	YPL087W	JLP2	P40206	208 aa		4.06	□□□□□ -1.76
YDC1	YPL087W	PAN6	P40459	309 aa		4.06	□□□□□ -1.76
YDC1	YPL087W	YJR030C	P47101	745 aa		4.06	□□□□□ -1.76
YDC1	YPL087W	SWC4	P53201	476 aa		4.06	□□□□□ -1.76
YDC1	YPL087W	YGR250C	P53316	781 aa	Known RBP	4.06	□□□□□ -1.76
YDC1	YPL087W	SPR6	Q01684	191 aa		4.06	□□□□□ -1.76
YDC1	YPL087W	PIR1	Q03178	341 aa		4.06	□□□□□ -1.76
YDC1	YPL087W	RNH1	Q04740	348 aa		4.06	□□□□□ -1.76
YDC1	YPL087W	MDM36	Q06820	579 aa		4.06	□□□□□ -1.76
YDC1	YPL087W	DTD1	Q07648	150 aa	Known RBP	4.06	□□□□□ -1.76
YDC1	YPL087W	SLF1	Q12034	447 aa	Known RBP	4.06	□□□□□ -1.76
YDC1	YPL087W	TMS1	Q12116	473 aa		4.06	□□□□□ -1.76
YDC1	YPL087W	WTM1	Q12363	437 aa	Known RBP	4.06	□□□□□ -1.76
YDC1	YPL087W	MTR10	Q99189	972 aa		4.06	□□□□□ -1.76
YDC1	YPL087W	MEX67	Q99257	599 aa	Known RBP	4.06	□□□□□ -1.76
YDC1	YPL087W	CDC21	P06785	304 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms