Protein–RNA interactions for Protein: P28263

UBC8, Ubiquitin-conjugating enzyme E2-24 kDa, yeastyeast

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBC8P28263 NSR1YGR159C 1245 nt19.02■□□□□ 0.64
UBC8P28263 YML009W-BYML009W-B 477 nt18.68■□□□□ 0.58
UBC8P28263 NOP1YDL014W 984 nt17.96■□□□□ 0.47
UBC8P28263 MDJ1YFL016C 1536 nt17.32■□□□□ 0.36
UBC8P28263 YKL036CYKL036C 393 nt16.16■□□□□ 0.18
UBC8P28263 YJL027CYJL027C 417 nt15.91■□□□□ 0.14
UBC8P28263 SRX1YKL086W 384 nt15.73■□□□□ 0.11
UBC8P28263 Q0297Q0297 156 nt15.63■□□□□ 0.09
UBC8P28263 DBP2YNL112W 1641 nt15.2■□□□□ 0.02
UBC8P28263 YBR190WYBR190W 312 nt14.9□□□□□ -0.02
UBC8P28263 YCR051WYCR051W 669 nt14.84□□□□□ -0.03
UBC8P28263 TRN1tP(UGG)A 72 nt14.53□□□□□ -0.08
UBC8P28263 SUF9tP(UGG)F 72 nt14.53□□□□□ -0.08
UBC8P28263 SUF8tP(UGG)H 72 nt14.53□□□□□ -0.08
UBC8P28263 tP(UGG)LtP(UGG)L 72 nt14.53□□□□□ -0.08
UBC8P28263 SUF7tP(UGG)M 72 nt14.53□□□□□ -0.08
UBC8P28263 tP(UGG)N1tP(UGG)N1 72 nt14.53□□□□□ -0.08
UBC8P28263 tP(UGG)N2tP(UGG)N2 72 nt14.53□□□□□ -0.08
UBC8P28263 tP(UGG)O1tP(UGG)O1 72 nt14.53□□□□□ -0.08
UBC8P28263 SUF11tP(UGG)O2 72 nt14.53□□□□□ -0.08
UBC8P28263 SCS3YGL126W 1143 nt14.48□□□□□ -0.09
UBC8P28263 RTC3YHR087W 336 nt14.47□□□□□ -0.09
UBC8P28263 CCC1YLR220W 969 nt14.3□□□□□ -0.12
UBC8P28263 SSA3YBL075C 1950 nt14.18□□□□□ -0.14
UBC8P28263 RVS167YDR388W 1449 nt14.07□□□□□ -0.16
UBC8P28263 YOL085CYOL085C 342 nt14.04□□□□□ -0.16
UBC8P28263 RPP1BYDL130W 321 nt14□□□□□ -0.17
UBC8P28263 SCJ1YMR214W 1134 nt13.99□□□□□ -0.17
UBC8P28263 PUT4YOR348C 1884 nt13.93□□□□□ -0.18
UBC8P28263 PKP1YIL042C 1185 nt13.85□□□□□ -0.19
UBC8P28263 tP(UGG)O3tP(UGG)O3 72 nt13.57□□□□□ -0.24
UBC8P28263 ARE1YCR048W 1833 nt13.53□□□□□ -0.24
UBC8P28263 SHR5YOL110W 714 nt13.52□□□□□ -0.25
UBC8P28263 PET122YER153C 765 nt13.44□□□□□ -0.26
UBC8P28263 URN1YPR152C 1398 nt13.42□□□□□ -0.26
UBC8P28263 POA1YBR022W 534 nt13.41□□□□□ -0.26
UBC8P28263 SAH1YER043C 1350 nt13.37□□□□□ -0.27
UBC8P28263 OPI9YLR338W 858 nt13.35□□□□□ -0.27
UBC8P28263 YHR049C-AYHR049C-A 297 nt13.32□□□□□ -0.28
UBC8P28263 DEP1YAL013W 1218 nt13.27□□□□□ -0.29
UBC8P28263 BSC6YOL137W 1494 nt13.23□□□□□ -0.29
UBC8P28263 YDJ1YNL064C 1230 nt13.14□□□□□ -0.31
UBC8P28263 SCR1SCR1 522 nt13.11□□□□□ -0.31
UBC8P28263 SPT5YML010W 3192 nt13.08□□□□□ -0.32
UBC8P28263 RPN10YHR200W 807 nt13.08□□□□□ -0.32
UBC8P28263 YNL208WYNL208W 600 nt13.02□□□□□ -0.33
UBC8P28263 RRN5YLR141W 1092 nt13□□□□□ -0.33
UBC8P28263 BUD23YCR047C 828 nt12.93□□□□□ -0.34
UBC8P28263 PUN1YLR414C 792 nt12.93□□□□□ -0.34
UBC8P28263 GAR1YHR089C 618 nt12.88□□□□□ -0.35
UBC8P28263 PTC2YER089C 1395 nt12.85□□□□□ -0.35
UBC8P28263 ATS1YAL020C 1002 nt12.82□□□□□ -0.36
UBC8P28263 YJR018WYJR018W 363 nt12.78□□□□□ -0.36
UBC8P28263 SSA4YER103W 1929 nt12.76□□□□□ -0.37
UBC8P28263 NAB2YGL122C 1578 nt12.76□□□□□ -0.37
UBC8P28263 YER088W-BYER088W-B 147 nt12.75□□□□□ -0.37
UBC8P28263 FIS1YIL065C 468 nt12.57□□□□□ -0.4
UBC8P28263 YJR120WYJR120W 351 nt12.56□□□□□ -0.4
UBC8P28263 RSB1YOR049C 1065 nt12.55□□□□□ -0.4
UBC8P28263 DAL1YIR027C 1383 nt12.5□□□□□ -0.41
UBC8P28263 TIR1YER011W 765 nt12.49□□□□□ -0.41
UBC8P28263 MEP2YNL142W 1500 nt12.47□□□□□ -0.41
UBC8P28263 SSA1YAL005C 1929 nt12.47□□□□□ -0.41
UBC8P28263 FPR4YLR449W 1179 nt12.4□□□□□ -0.42
UBC8P28263 PHO4YFR034C 939 nt12.39□□□□□ -0.43
UBC8P28263 INM2YDR287W 879 nt12.38□□□□□ -0.43
UBC8P28263 BDF1YLR399C 2061 nt12.36□□□□□ -0.43
UBC8P28263 YPS1YLR120C 1710 nt12.34□□□□□ -0.43
UBC8P28263 RPP2BYDR382W 333 nt12.34□□□□□ -0.43
UBC8P28263 DCW1YKL046C 1350 nt12.28□□□□□ -0.44
UBC8P28263 SRB2YHR041C 633 nt12.22□□□□□ -0.45
UBC8P28263 YDR095CYDR095C 411 nt12.19□□□□□ -0.46
UBC8P28263 YBL100CYBL100C 315 nt12.18□□□□□ -0.46
UBC8P28263 TAT1YBR069C 1860 nt12.18□□□□□ -0.46
UBC8P28263 YHR165W-AYHR165W-A 312 nt12.17□□□□□ -0.46
UBC8P28263 EMI2YDR516C 1503 nt12.09□□□□□ -0.47
UBC8P28263 BDH2YAL061W 1254 nt12.07□□□□□ -0.48
UBC8P28263 YBR220CYBR220C 1683 nt12.06□□□□□ -0.48
UBC8P28263 FUN26YAL022C 1554 nt12.04□□□□□ -0.48
UBC8P28263 PTP1YDL230W 1008 nt12□□□□□ -0.49
UBC8P28263 YMR090WYMR090W 684 nt11.99□□□□□ -0.49
UBC8P28263 PST2YDR032C 597 nt11.98□□□□□ -0.49
UBC8P28263 CAC2YML102W 1407 nt11.97□□□□□ -0.49
UBC8P28263 YDL221WYDL221W 552 nt11.97□□□□□ -0.49
UBC8P28263 RPP2AYOL039W 321 nt11.94□□□□□ -0.5
UBC8P28263 SDH1YKL148C 1923 nt11.92□□□□□ -0.5
UBC8P28263 ALF1YNL148C 765 nt11.9□□□□□ -0.5
UBC8P28263 TRM9YML014W 840 nt11.89□□□□□ -0.51
UBC8P28263 WWM1YFL010C 636 nt11.87□□□□□ -0.51
UBC8P28263 CCT6YDR188W 1641 nt11.84□□□□□ -0.51
UBC8P28263 LSM3YLR438C-A 270 nt11.83□□□□□ -0.52
UBC8P28263 SIS1YNL007C 1059 nt11.82□□□□□ -0.52
UBC8P28263 IRC15YPL017C 1500 nt11.81□□□□□ -0.52
UBC8P28263 SCC4YER147C 1875 nt11.76□□□□□ -0.53
UBC8P28263 SUF2tP(AGG)C 72 nt11.72□□□□□ -0.53
UBC8P28263 SUF10tP(AGG)N 72 nt11.72□□□□□ -0.53
UBC8P28263 GIS3YLR094C 1509 nt11.7□□□□□ -0.54
UBC8P28263 PCH2YBR186W 1695 nt11.68□□□□□ -0.54
UBC8P28263 YFL021C-AYFL021C-A 855 nt11.68□□□□□ -0.54
UBC8P28263 GFD2YCL036W 1701 nt11.68□□□□□ -0.54
Retrieved 100 of 7,029 protein–RNA pairs in 10.2 ms