RNA–Protein interactions for RNA: YHR009C

TDA3, Transcript of Putative oxidoreductase involved in late endosome to Golgi transport, yeastyeast

Gene TDA3, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDA3YHR009C ATG38Q05789 226 aaKnown RBP3.36□□□□□ -1.87
TDA3YHR009C SFH1Q06168 426 aa3.36□□□□□ -1.87
TDA3YHR009C MSH5Q12175 901 aa3.36□□□□□ -1.87
TDA3YHR009C TFC7Q12415 435 aa3.36□□□□□ -1.87
TDA3YHR009C SEC14P24280 304 aaKnown RBP3.35□□□□□ -1.87
TDA3YHR009C KRE6P32486 720 aa3.35□□□□□ -1.87
TDA3YHR009C DOA4P32571 926 aa3.35□□□□□ -1.87
TDA3YHR009C SSO1P32867 290 aa3.35□□□□□ -1.87
TDA3YHR009C BMH2P34730 273 aaKnown RBP3.35□□□□□ -1.87
TDA3YHR009C YKT6P36015 200 aaKnown RBP3.35□□□□□ -1.87
TDA3YHR009C YBR062CP38239 180 aa3.35□□□□□ -1.87
TDA3YHR009C VAB2P40003 282 aa3.35□□□□□ -1.87
TDA3YHR009C IGD1P43598 195 aa3.35□□□□□ -1.87
TDA3YHR009C TPN1P53099 579 aa3.35□□□□□ -1.87
TDA3YHR009C SDS23P53172 527 aa3.35□□□□□ -1.87
TDA3YHR009C PEX31P53203 462 aa3.35□□□□□ -1.87
TDA3YHR009C TPS1Q00764 495 aaKnown RBP3.35□□□□□ -1.87
TDA3YHR009C RMI1Q02685 241 aa3.35□□□□□ -1.87
TDA3YHR009C YDR115WQ04598 105 aa3.35□□□□□ -1.87
TDA3YHR009C DPP1Q05521 289 aa3.35□□□□□ -1.87
TDA3YHR009C YLR283WQ05867 314 aa3.35□□□□□ -1.87
TDA3YHR009C YOR114WQ12219 294 aa3.35□□□□□ -1.87
TDA3YHR009C WTM1Q12363 437 aaKnown RBP3.35□□□□□ -1.87
TDA3YHR009C RPP0P05317 312 aaKnown RBP3.34□□□□□ -1.87
TDA3YHR009C BGL2P15703 313 aaKnown RBP3.34□□□□□ -1.87
TDA3YHR009C SRB4P32569 687 aa3.34□□□□□ -1.87
TDA3YHR009C CYM1P32898 989 aa3.34□□□□□ -1.87
TDA3YHR009C YKL187CP34231 750 aa3.34□□□□□ -1.87
TDA3YHR009C GPX1P36014 167 aa3.34□□□□□ -1.87
TDA3YHR009C BMT2P38278 337 aa3.34□□□□□ -1.87
TDA3YHR009C PRS2P38620 318 aaKnown RBP3.34□□□□□ -1.87
TDA3YHR009C MSS2P40990 351 aa3.34□□□□□ -1.87
TDA3YHR009C MRPL50P53724 139 aa3.34□□□□□ -1.87
TDA3YHR009C TRM44Q02648 567 aaKnown RBP3.34□□□□□ -1.87
TDA3YHR009C ARO80Q04052 950 aa3.34□□□□□ -1.87
TDA3YHR009C MYO5Q04439 1219 aaKnown RBP3.34□□□□□ -1.87
TDA3YHR009C SMD2Q06217 110 aaKnown RBP3.34□□□□□ -1.87
TDA3YHR009C SMC4Q12267 1418 aa3.34□□□□□ -1.87
TDA3YHR009C REV3P14284 1504 aa3.34□□□□□ -1.88
TDA3YHR009C TDH2P00358 332 aaKnown RBP3.34□□□□□ -1.88
TDA3YHR009C ARG80P07249 177 aa3.34□□□□□ -1.88
TDA3YHR009C KSS1P14681 368 aa3.34□□□□□ -1.88
TDA3YHR009C MRPS28P21771 286 aa3.34□□□□□ -1.88
TDA3YHR009C IES6P32617 166 aa3.34□□□□□ -1.88
TDA3YHR009C LDB7P38210 180 aa3.34□□□□□ -1.88
TDA3YHR009C SHE3P38272 425 aaKnown RBP3.34□□□□□ -1.88
TDA3YHR009C SLX1P38324 304 aa3.34□□□□□ -1.88
TDA3YHR009C YER034WP40022 185 aaKnown RBP3.34□□□□□ -1.88
TDA3YHR009C PHB1P40961 287 aa3.34□□□□□ -1.88
TDA3YHR009C RPL10P41805 221 aaKnown RBP3.34□□□□□ -1.88
TDA3YHR009C OTU1P43558 301 aa3.34□□□□□ -1.88
TDA3YHR009C ASG7P46993 209 aa3.34□□□□□ -1.88
TDA3YHR009C IBA57P47158 497 aa3.34□□□□□ -1.88
TDA3YHR009C NBP1P52919 319 aaPredicted RBP3.34□□□□□ -1.88
TDA3YHR009C MRX11Q03079 207 aa3.34□□□□□ -1.88
TDA3YHR009C INP2Q03824 705 aa3.34□□□□□ -1.88
TDA3YHR009C ECM11Q04110 302 aa3.34□□□□□ -1.88
TDA3YHR009C TAF9Q05027 157 aa3.34□□□□□ -1.88
TDA3YHR009C CTR3Q06686 241 aa3.34□□□□□ -1.88
TDA3YHR009C YOR292CQ08743 309 aa3.34□□□□□ -1.88
TDA3YHR009C MMT2Q08970 484 aa3.34□□□□□ -1.88
TDA3YHR009C PER33Q12144 273 aa3.34□□□□□ -1.88
TDA3YHR009C NOT5Q12514 560 aaPredicted RBP3.34□□□□□ -1.88
TDA3YHR009C LSO2Q3E772 92 aaKnown RBP3.34□□□□□ -1.88
TDA3YHR009C RPS3P05750 240 aaKnown RBP3.33□□□□□ -1.88
TDA3YHR009C MATALPHA1P0CY06 175 aa3.33□□□□□ -1.88
TDA3YHR009C HMLALPHA1P0CY07 175 aa3.33□□□□□ -1.88
TDA3YHR009C AEP1P32493 518 aa3.33□□□□□ -1.88
TDA3YHR009C MRX3P38172 270 aa3.33□□□□□ -1.88
TDA3YHR009C ATG12P38316 186 aa3.33□□□□□ -1.88
TDA3YHR009C EFM1P38732 585 aa3.33□□□□□ -1.88
TDA3YHR009C RAD17P48581 401 aa3.33□□□□□ -1.88
TDA3YHR009C RTC4P53850 401 aa3.33□□□□□ -1.88
TDA3YHR009C SRO7Q12038 1033 aa3.33□□□□□ -1.88
TDA3YHR009C DAL81P21657 970 aa3.32□□□□□ -1.88
TDA3YHR009C RPS5P26783 225 aaKnown RBP3.32□□□□□ -1.88
TDA3YHR009C ALD5P40047 520 aaKnown RBP3.32□□□□□ -1.88
TDA3YHR009C YPS5P53057 165 aa3.32□□□□□ -1.88
TDA3YHR009C MAL13P53338 473 aa3.32□□□□□ -1.88
TDA3YHR009C RNY1Q02933 434 aaKnown RBP3.32□□□□□ -1.88
TDA3YHR009C YML018CQ03730 393 aa3.32□□□□□ -1.88
TDA3YHR009C YML108WQ03759 105 aa3.32□□□□□ -1.88
TDA3YHR009C KRE28Q04431 385 aa3.32□□□□□ -1.88
TDA3YHR009C SEC13Q04491 297 aaKnown RBP3.32□□□□□ -1.88
TDA3YHR009C VIK1Q12045 647 aa3.32□□□□□ -1.88
TDA3YHR009C SME1Q12330 94 aaPredicted RBP3.32□□□□□ -1.88
TDA3YHR009C ADF1Q2V2Q1 113 aa3.32□□□□□ -1.88
TDA3YHR009C REV1P12689 985 aa3.31□□□□□ -1.88
TDA3YHR009C CDC13P32797 924 aaKnown RBP3.31□□□□□ -1.88
TDA3YHR009C MTW1P39731 289 aa3.31□□□□□ -1.88
TDA3YHR009C HIT1P46973 164 aa3.31□□□□□ -1.88
TDA3YHR009C YJR012CP47087 207 aa3.31□□□□□ -1.88
TDA3YHR009C NOP13P53883 403 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
TDA3YHR009C RPL21AQ02753 160 aaKnown RBP3.31□□□□□ -1.88
TDA3YHR009C YDR018CQ12185 396 aa3.31□□□□□ -1.88
TDA3YHR009C GIS3Q12418 502 aa3.31□□□□□ -1.88
TDA3YHR009C SSN2P38931 1420 aa3.31□□□□□ -1.88
TDA3YHR009C UFD4P33202 1483 aa3.31□□□□□ -1.88
TDA3YHR009C TY1B-DR4Q07793 1604 aa3.31□□□□□ -1.88
TDA3YHR009C SRB8P25648 1427 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 55.5 ms