Protein–RNA interactions for Protein: Q04598

YDR115W, 54S ribosomal protein L34, mitochondrial, yeastyeast

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YDR115WQ04598 YML009W-BYML009W-B 477 nt14.32□□□□□ -0.12
YDR115WQ04598 NSR1YGR159C 1245 nt14.31□□□□□ -0.12
YDR115WQ04598 NOP1YDL014W 984 nt13.88□□□□□ -0.19
YDR115WQ04598 MDJ1YFL016C 1536 nt12.82□□□□□ -0.36
YDR115WQ04598 YKL036CYKL036C 393 nt12.69□□□□□ -0.38
YDR115WQ04598 SRX1YKL086W 384 nt12.1□□□□□ -0.47
YDR115WQ04598 Q0297Q0297 156 nt12.09□□□□□ -0.47
YDR115WQ04598 YJL027CYJL027C 417 nt11.84□□□□□ -0.51
YDR115WQ04598 YCR051WYCR051W 669 nt11.49□□□□□ -0.57
YDR115WQ04598 SCS3YGL126W 1143 nt11.49□□□□□ -0.57
YDR115WQ04598 DBP2YNL112W 1641 nt11.28□□□□□ -0.6
YDR115WQ04598 TRN1tP(UGG)A 72 nt11.02□□□□□ -0.65
YDR115WQ04598 SUF9tP(UGG)F 72 nt11.02□□□□□ -0.65
YDR115WQ04598 SUF8tP(UGG)H 72 nt11.02□□□□□ -0.65
YDR115WQ04598 tP(UGG)LtP(UGG)L 72 nt11.02□□□□□ -0.65
YDR115WQ04598 SUF7tP(UGG)M 72 nt11.02□□□□□ -0.65
YDR115WQ04598 tP(UGG)N1tP(UGG)N1 72 nt11.02□□□□□ -0.65
YDR115WQ04598 tP(UGG)N2tP(UGG)N2 72 nt11.02□□□□□ -0.65
YDR115WQ04598 tP(UGG)O1tP(UGG)O1 72 nt11.02□□□□□ -0.65
YDR115WQ04598 SUF11tP(UGG)O2 72 nt11.02□□□□□ -0.65
YDR115WQ04598 YOL085CYOL085C 342 nt10.99□□□□□ -0.65
YDR115WQ04598 YBR190WYBR190W 312 nt10.95□□□□□ -0.66
YDR115WQ04598 CCC1YLR220W 969 nt10.92□□□□□ -0.66
YDR115WQ04598 RPP1BYDL130W 321 nt10.86□□□□□ -0.67
YDR115WQ04598 PKP1YIL042C 1185 nt10.85□□□□□ -0.67
YDR115WQ04598 RTC3YHR087W 336 nt10.72□□□□□ -0.69
YDR115WQ04598 RVS167YDR388W 1449 nt10.61□□□□□ -0.71
YDR115WQ04598 SCJ1YMR214W 1134 nt10.52□□□□□ -0.73
YDR115WQ04598 PET122YER153C 765 nt10.39□□□□□ -0.75
YDR115WQ04598 tP(UGG)O3tP(UGG)O3 72 nt10.38□□□□□ -0.75
YDR115WQ04598 SCR1SCR1 522 nt10.26□□□□□ -0.77
YDR115WQ04598 ATS1YAL020C 1002 nt10.24□□□□□ -0.77
YDR115WQ04598 SHR5YOL110W 714 nt10.2□□□□□ -0.78
YDR115WQ04598 RRN5YLR141W 1092 nt10.07□□□□□ -0.8
YDR115WQ04598 YDJ1YNL064C 1230 nt10.04□□□□□ -0.8
YDR115WQ04598 PUT4YOR348C 1884 nt10.02□□□□□ -0.8
YDR115WQ04598 URN1YPR152C 1398 nt9.99□□□□□ -0.81
YDR115WQ04598 DEP1YAL013W 1218 nt9.96□□□□□ -0.82
YDR115WQ04598 YER088W-BYER088W-B 147 nt9.87□□□□□ -0.83
YDR115WQ04598 GAR1YHR089C 618 nt9.85□□□□□ -0.83
YDR115WQ04598 OPI9YLR338W 858 nt9.85□□□□□ -0.83
YDR115WQ04598 RSB1YOR049C 1065 nt9.85□□□□□ -0.83
YDR115WQ04598 SAH1YER043C 1350 nt9.83□□□□□ -0.84
YDR115WQ04598 RPN10YHR200W 807 nt9.82□□□□□ -0.84
YDR115WQ04598 ARE1YCR048W 1833 nt9.82□□□□□ -0.84
YDR115WQ04598 YNL208WYNL208W 600 nt9.79□□□□□ -0.84
YDR115WQ04598 POA1YBR022W 534 nt9.71□□□□□ -0.86
YDR115WQ04598 YHR049C-AYHR049C-A 297 nt9.7□□□□□ -0.86
YDR115WQ04598 Q0182Q0182 405 nt9.63□□□□□ -0.87
YDR115WQ04598 SSA3YBL075C 1950 nt9.59□□□□□ -0.87
YDR115WQ04598 PUN1YLR414C 792 nt9.58□□□□□ -0.88
YDR115WQ04598 TIR1YER011W 765 nt9.52□□□□□ -0.89
YDR115WQ04598 BSC6YOL137W 1494 nt9.52□□□□□ -0.89
YDR115WQ04598 YJR018WYJR018W 363 nt9.51□□□□□ -0.89
YDR115WQ04598 PST2YDR032C 597 nt9.49□□□□□ -0.89
YDR115WQ04598 PTC2YER089C 1395 nt9.48□□□□□ -0.89
YDR115WQ04598 BUD23YCR047C 828 nt9.47□□□□□ -0.89
YDR115WQ04598 SSA1YAL005C 1929 nt9.43□□□□□ -0.9
YDR115WQ04598 NAB2YGL122C 1578 nt9.37□□□□□ -0.91
YDR115WQ04598 YJR120WYJR120W 351 nt9.33□□□□□ -0.92
YDR115WQ04598 RPP2BYDR382W 333 nt9.31□□□□□ -0.92
YDR115WQ04598 SRB2YHR041C 633 nt9.23□□□□□ -0.93
YDR115WQ04598 DAL1YIR027C 1383 nt9.23□□□□□ -0.93
YDR115WQ04598 FIS1YIL065C 468 nt9.22□□□□□ -0.93
YDR115WQ04598 FPR4YLR449W 1179 nt9.22□□□□□ -0.93
YDR115WQ04598 INM2YDR287W 879 nt9.19□□□□□ -0.94
YDR115WQ04598 PHO4YFR034C 939 nt9.14□□□□□ -0.95
YDR115WQ04598 SHU1YHL006C 453 nt9.14□□□□□ -0.95
YDR115WQ04598 SPT5YML010W 3192 nt9.12□□□□□ -0.95
YDR115WQ04598 MOT3YMR070W 1473 nt9.11□□□□□ -0.95
YDR115WQ04598 BDH2YAL061W 1254 nt9.09□□□□□ -0.95
YDR115WQ04598 YBL100CYBL100C 315 nt9.09□□□□□ -0.95
YDR115WQ04598 WWM1YFL010C 636 nt9.08□□□□□ -0.96
YDR115WQ04598 YKL097CYKL097C 411 nt9.08□□□□□ -0.96
YDR115WQ04598 YAL037C-BYAL037C-B 975 nt9.04□□□□□ -0.96
YDR115WQ04598 YGR021WYGR021W 873 nt9□□□□□ -0.97
YDR115WQ04598 YPS1YLR120C 1710 nt9□□□□□ -0.97
YDR115WQ04598 FUN26YAL022C 1554 nt8.98□□□□□ -0.97
YDR115WQ04598 HOM6YJR139C 1080 nt8.95□□□□□ -0.98
YDR115WQ04598 LSM3YLR438C-A 270 nt8.94□□□□□ -0.98
YDR115WQ04598 TRM9YML014W 840 nt8.94□□□□□ -0.98
YDR115WQ04598 MEP2YNL142W 1500 nt8.94□□□□□ -0.98
YDR115WQ04598 YFL021C-AYFL021C-A 855 nt8.93□□□□□ -0.98
YDR115WQ04598 YDR095CYDR095C 411 nt8.92□□□□□ -0.98
YDR115WQ04598 YHR165W-AYHR165W-A 312 nt8.92□□□□□ -0.98
YDR115WQ04598 MNP1YGL068W 585 nt8.91□□□□□ -0.98
YDR115WQ04598 ALF1YNL148C 765 nt8.89□□□□□ -0.99
YDR115WQ04598 CCT6YDR188W 1641 nt8.86□□□□□ -0.99
YDR115WQ04598 SSA4YER103W 1929 nt8.86□□□□□ -0.99
YDR115WQ04598 RKM5YLR137W 1104 nt8.83□□□□□ -1
YDR115WQ04598 SUF2tP(AGG)C 72 nt8.8□□□□□ -1
YDR115WQ04598 SUF10tP(AGG)N 72 nt8.8□□□□□ -1
YDR115WQ04598 DCW1YKL046C 1350 nt8.8□□□□□ -1
YDR115WQ04598 RPP2AYOL039W 321 nt8.76□□□□□ -1.01
YDR115WQ04598 SIS1YNL007C 1059 nt8.73□□□□□ -1.01
YDR115WQ04598 YOL037CYOL037C 354 nt8.72□□□□□ -1.01
YDR115WQ04598 PTP1YDL230W 1008 nt8.71□□□□□ -1.02
YDR115WQ04598 YOR139CYOR139C 393 nt8.71□□□□□ -1.02
YDR115WQ04598 NPL3YDR432W 1245 nt8.7□□□□□ -1.02
YDR115WQ04598 EMI2YDR516C 1503 nt8.69□□□□□ -1.02
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms