Protein–RNA interactions for Protein: P43558

OTU1, Ubiquitin thioesterase OTU1, yeastyeast

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
OTU1P43558 NSR1YGR159C 1245 nt17.51■□□□□ 0.39
OTU1P43558 YML009W-BYML009W-B 477 nt17.27■□□□□ 0.36
OTU1P43558 NOP1YDL014W 984 nt16.59■□□□□ 0.25
OTU1P43558 MDJ1YFL016C 1536 nt15.96■□□□□ 0.15
OTU1P43558 YKL036CYKL036C 393 nt14.96□□□□□ -0.01
OTU1P43558 YJL027CYJL027C 417 nt14.66□□□□□ -0.06
OTU1P43558 SRX1YKL086W 384 nt14.52□□□□□ -0.09
OTU1P43558 Q0297Q0297 156 nt14.43□□□□□ -0.1
OTU1P43558 DBP2YNL112W 1641 nt13.98□□□□□ -0.17
OTU1P43558 YCR051WYCR051W 669 nt13.73□□□□□ -0.21
OTU1P43558 YBR190WYBR190W 312 nt13.69□□□□□ -0.22
OTU1P43558 SCS3YGL126W 1143 nt13.42□□□□□ -0.26
OTU1P43558 TRN1tP(UGG)A 72 nt13.39□□□□□ -0.27
OTU1P43558 SUF9tP(UGG)F 72 nt13.39□□□□□ -0.27
OTU1P43558 SUF8tP(UGG)H 72 nt13.39□□□□□ -0.27
OTU1P43558 tP(UGG)LtP(UGG)L 72 nt13.39□□□□□ -0.27
OTU1P43558 SUF7tP(UGG)M 72 nt13.39□□□□□ -0.27
OTU1P43558 tP(UGG)N1tP(UGG)N1 72 nt13.39□□□□□ -0.27
OTU1P43558 tP(UGG)N2tP(UGG)N2 72 nt13.39□□□□□ -0.27
OTU1P43558 tP(UGG)O1tP(UGG)O1 72 nt13.39□□□□□ -0.27
OTU1P43558 SUF11tP(UGG)O2 72 nt13.39□□□□□ -0.27
OTU1P43558 RTC3YHR087W 336 nt13.34□□□□□ -0.27
OTU1P43558 CCC1YLR220W 969 nt13.23□□□□□ -0.29
OTU1P43558 YOL085CYOL085C 342 nt12.98□□□□□ -0.33
OTU1P43558 RVS167YDR388W 1449 nt12.97□□□□□ -0.33
OTU1P43558 RPP1BYDL130W 321 nt12.94□□□□□ -0.34
OTU1P43558 SCJ1YMR214W 1134 nt12.91□□□□□ -0.34
OTU1P43558 SSA3YBL075C 1950 nt12.9□□□□□ -0.34
OTU1P43558 PKP1YIL042C 1185 nt12.84□□□□□ -0.35
OTU1P43558 PUT4YOR348C 1884 nt12.77□□□□□ -0.37
OTU1P43558 tP(UGG)O3tP(UGG)O3 72 nt12.52□□□□□ -0.41
OTU1P43558 SHR5YOL110W 714 nt12.46□□□□□ -0.41
OTU1P43558 PET122YER153C 765 nt12.43□□□□□ -0.42
OTU1P43558 ARE1YCR048W 1833 nt12.42□□□□□ -0.42
OTU1P43558 URN1YPR152C 1398 nt12.37□□□□□ -0.43
OTU1P43558 POA1YBR022W 534 nt12.33□□□□□ -0.44
OTU1P43558 SAH1YER043C 1350 nt12.3□□□□□ -0.44
OTU1P43558 OPI9YLR338W 858 nt12.27□□□□□ -0.45
OTU1P43558 YHR049C-AYHR049C-A 297 nt12.25□□□□□ -0.45
OTU1P43558 DEP1YAL013W 1218 nt12.25□□□□□ -0.45
OTU1P43558 BSC6YOL137W 1494 nt12.15□□□□□ -0.46
OTU1P43558 SCR1SCR1 522 nt12.13□□□□□ -0.47
OTU1P43558 YDJ1YNL064C 1230 nt12.11□□□□□ -0.47
OTU1P43558 RPN10YHR200W 807 nt12.05□□□□□ -0.48
OTU1P43558 RRN5YLR141W 1092 nt12.02□□□□□ -0.49
OTU1P43558 YNL208WYNL208W 600 nt12□□□□□ -0.49
OTU1P43558 SPT5YML010W 3192 nt11.91□□□□□ -0.5
OTU1P43558 BUD23YCR047C 828 nt11.91□□□□□ -0.5
OTU1P43558 GAR1YHR089C 618 nt11.91□□□□□ -0.5
OTU1P43558 PUN1YLR414C 792 nt11.9□□□□□ -0.5
OTU1P43558 ATS1YAL020C 1002 nt11.88□□□□□ -0.51
OTU1P43558 PTC2YER089C 1395 nt11.84□□□□□ -0.51
OTU1P43558 YER088W-BYER088W-B 147 nt11.78□□□□□ -0.52
OTU1P43558 YJR018WYJR018W 363 nt11.76□□□□□ -0.53
OTU1P43558 NAB2YGL122C 1578 nt11.72□□□□□ -0.53
OTU1P43558 SSA4YER103W 1929 nt11.66□□□□□ -0.54
OTU1P43558 RSB1YOR049C 1065 nt11.63□□□□□ -0.55
OTU1P43558 FIS1YIL065C 468 nt11.57□□□□□ -0.56
OTU1P43558 YJR120WYJR120W 351 nt11.57□□□□□ -0.56
OTU1P43558 TIR1YER011W 765 nt11.53□□□□□ -0.56
OTU1P43558 DAL1YIR027C 1383 nt11.5□□□□□ -0.57
OTU1P43558 SSA1YAL005C 1929 nt11.5□□□□□ -0.57
OTU1P43558 FPR4YLR449W 1179 nt11.45□□□□□ -0.58
OTU1P43558 MEP2YNL142W 1500 nt11.44□□□□□ -0.58
OTU1P43558 PHO4YFR034C 939 nt11.41□□□□□ -0.58
OTU1P43558 RPP2BYDR382W 333 nt11.39□□□□□ -0.59
OTU1P43558 INM2YDR287W 879 nt11.38□□□□□ -0.59
OTU1P43558 Q0182Q0182 405 nt11.35□□□□□ -0.59
OTU1P43558 YPS1YLR120C 1710 nt11.33□□□□□ -0.6
OTU1P43558 SRB2YHR041C 633 nt11.27□□□□□ -0.61
OTU1P43558 DCW1YKL046C 1350 nt11.27□□□□□ -0.61
OTU1P43558 BDF1YLR399C 2061 nt11.26□□□□□ -0.61
OTU1P43558 YBL100CYBL100C 315 nt11.23□□□□□ -0.61
OTU1P43558 YHR165W-AYHR165W-A 312 nt11.21□□□□□ -0.61
OTU1P43558 YDR095CYDR095C 411 nt11.2□□□□□ -0.62
OTU1P43558 BDH2YAL061W 1254 nt11.13□□□□□ -0.63
OTU1P43558 TAT1YBR069C 1860 nt11.1□□□□□ -0.63
OTU1P43558 EMI2YDR516C 1503 nt11.1□□□□□ -0.63
OTU1P43558 FUN26YAL022C 1554 nt11.08□□□□□ -0.64
OTU1P43558 PST2YDR032C 597 nt11.08□□□□□ -0.64
OTU1P43558 YBR220CYBR220C 1683 nt11.04□□□□□ -0.64
OTU1P43558 PTP1YDL230W 1008 nt11.02□□□□□ -0.65
OTU1P43558 YMR090WYMR090W 684 nt11□□□□□ -0.65
OTU1P43558 CAC2YML102W 1407 nt11□□□□□ -0.65
OTU1P43558 YDL221WYDL221W 552 nt10.98□□□□□ -0.65
OTU1P43558 ALF1YNL148C 765 nt10.98□□□□□ -0.65
OTU1P43558 WWM1YFL010C 636 nt10.97□□□□□ -0.65
OTU1P43558 RPP2AYOL039W 321 nt10.97□□□□□ -0.65
OTU1P43558 FPS1YLL043W 2010 nt10.97□□□□□ -0.65
OTU1P43558 TRM9YML014W 840 nt10.96□□□□□ -0.65
OTU1P43558 SDH1YKL148C 1923 nt10.92□□□□□ -0.66
OTU1P43558 CCT6YDR188W 1641 nt10.9□□□□□ -0.66
OTU1P43558 LSM3YLR438C-A 270 nt10.89□□□□□ -0.67
OTU1P43558 SIS1YNL007C 1059 nt10.86□□□□□ -0.67
OTU1P43558 IRC15YPL017C 1500 nt10.83□□□□□ -0.68
OTU1P43558 SUF2tP(AGG)C 72 nt10.8□□□□□ -0.68
OTU1P43558 SUF10tP(AGG)N 72 nt10.8□□□□□ -0.68
OTU1P43558 SCC4YER147C 1875 nt10.79□□□□□ -0.68
OTU1P43558 YFL021C-AYFL021C-A 855 nt10.78□□□□□ -0.68
OTU1P43558 GIS3YLR094C 1509 nt10.75□□□□□ -0.69
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms