RNA–Protein interactions for RNA: YLL050C

COF1, Transcript of Cofilin, involved in pH-dependent actin filament depolarization, yeastyeast

Gene COF1, Length 432 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
COF1YLL050C SWC4P53201 476 aa1.3□□□□□ -2.2
COF1YLL050C LSB1P53281 241 aa1.3□□□□□ -2.2
COF1YLL050C MTM1P53320 366 aa1.3□□□□□ -2.2
COF1YLL050C CWC25P53854 179 aaKnown RBP1.3□□□□□ -2.2
COF1YLL050C REX2P54964 269 aaKnown RBP1.3□□□□□ -2.2
COF1YLL050C YPL077CQ02831 240 aa1.3□□□□□ -2.2
COF1YLL050C SRL4Q03085 281 aa1.3□□□□□ -2.2
COF1YLL050C TDA1Q03533 586 aa1.3□□□□□ -2.2
COF1YLL050C RTN1Q04947 295 aaKnown RBP1.3□□□□□ -2.2
COF1YLL050C PBP4Q07362 185 aaKnown RBP1.3□□□□□ -2.2
COF1YLL050C DTD1Q07648 150 aaKnown RBP1.3□□□□□ -2.2
COF1YLL050C DDC1Q08949 612 aa1.3□□□□□ -2.2
COF1YLL050C YPQ1Q12010 308 aa1.3□□□□□ -2.2
COF1YLL050C BTS1Q12051 335 aa1.3□□□□□ -2.2
COF1YLL050C YDL109CQ12103 647 aa1.3□□□□□ -2.2
COF1YLL050C APC9Q12107 265 aa1.3□□□□□ -2.2
COF1YLL050C FCY22Q12119 530 aa1.3□□□□□ -2.2
COF1YLL050C RBD2Q12270 262 aa1.3□□□□□ -2.2
COF1YLL050C YRM1Q12340 786 aa1.3□□□□□ -2.2
COF1YLL050C COX2P00410 251 aa1.29□□□□□ -2.2
COF1YLL050C ILV1P00927 576 aaKnown RBP1.29□□□□□ -2.2
COF1YLL050C CYC3P06182 269 aa1.29□□□□□ -2.2
COF1YLL050C RAD3P06839 778 aa1.29□□□□□ -2.2
COF1YLL050C RPL23AP0CX41 137 aaKnown RBP1.29□□□□□ -2.2
COF1YLL050C RPL23BP0CX42 137 aaKnown RBP1.29□□□□□ -2.2
COF1YLL050C MSI1P13712 422 aa1.29□□□□□ -2.2
COF1YLL050C VPS1P21576 704 aaKnown RBP1.29□□□□□ -2.2
COF1YLL050C DAL82P21705 255 aa1.29□□□□□ -2.2
COF1YLL050C CPR4P25334 318 aa1.29□□□□□ -2.2
COF1YLL050C RVS161P25343 265 aaKnown RBP1.29□□□□□ -2.2
COF1YLL050C PRR1P28708 518 aa1.29□□□□□ -2.2
COF1YLL050C ARO2P28777 376 aaKnown RBP1.29□□□□□ -2.2
COF1YLL050C ZIP1P31111 875 aa1.29□□□□□ -2.2
COF1YLL050C LDS1P31379 325 aa1.29□□□□□ -2.2
COF1YLL050C NUP2P32499 720 aa1.29□□□□□ -2.2
COF1YLL050C YKL063CP35725 167 aa1.29□□□□□ -2.2
COF1YLL050C COS9P36034 407 aa1.29□□□□□ -2.2
COF1YLL050C DTR1P38125 572 aa1.29□□□□□ -2.2
COF1YLL050C YHR045WP38775 560 aa1.29□□□□□ -2.2
COF1YLL050C PRM9P39551 298 aa1.29□□□□□ -2.2
COF1YLL050C YNL208WP40159 199 aaKnown RBP1.29□□□□□ -2.2
COF1YLL050C YIA6P40556 373 aa1.29□□□□□ -2.2
COF1YLL050C YFL040WP43562 540 aa1.29□□□□□ -2.2
COF1YLL050C BNA6P43619 295 aa1.29□□□□□ -2.2
COF1YLL050C YFR057WP43625 151 aa1.29□□□□□ -2.2
COF1YLL050C CIN2P46670 268 aa1.29□□□□□ -2.2
COF1YLL050C YAR1P46683 200 aa1.29□□□□□ -2.2
COF1YLL050C CTK3P46963 296 aaPredicted RBP1.29□□□□□ -2.2
COF1YLL050C PMT4P46971 762 aa1.29□□□□□ -2.2
COF1YLL050C MRPL50P53724 139 aa1.29□□□□□ -2.2
COF1YLL050C YNL134CP53912 376 aaKnown RBP1.29□□□□□ -2.2
COF1YLL050C YLR152CP54072 576 aa1.29□□□□□ -2.2
COF1YLL050C SED5Q01590 340 aa1.29□□□□□ -2.2
COF1YLL050C PET117Q02771 107 aa1.29□□□□□ -2.2
COF1YLL050C YPL080CQ02826 108 aa1.29□□□□□ -2.2
COF1YLL050C TRM82Q03774 444 aa1.29□□□□□ -2.2
COF1YLL050C ADH6Q04894 360 aaKnown RBP1.29□□□□□ -2.2
COF1YLL050C COX20Q04935 205 aa1.29□□□□□ -2.2
COF1YLL050C GAS2Q06135 555 aa1.29□□□□□ -2.2
COF1YLL050C CTS2Q06350 511 aa1.29□□□□□ -2.2
COF1YLL050C TSR1Q07381 788 aaKnown RBP1.29□□□□□ -2.2
COF1YLL050C CMS1Q07897 291 aaKnown RBP1.29□□□□□ -2.2
COF1YLL050C YLR012CQ07927 99 aa1.29□□□□□ -2.2
COF1YLL050C IRC25Q07951 179 aa1.29□□□□□ -2.2
COF1YLL050C TMC1Q08422 150 aaPredicted RBP1.29□□□□□ -2.2
COF1YLL050C RDL2Q08742 149 aaKnown RBP1.29□□□□□ -2.2
COF1YLL050C YOR387CQ08910 206 aa1.29□□□□□ -2.2
COF1YLL050C TMS1Q12116 473 aa1.29□□□□□ -2.2
COF1YLL050C TY3A-GQ12173 290 aa1.29□□□□□ -2.2
COF1YLL050C RRP42Q12277 265 aaPredicted RBP1.29□□□□□ -2.2
COF1YLL050C JID1Q12350 301 aa1.29□□□□□ -2.2
COF1YLL050C YDL199CQ12407 687 aa1.29□□□□□ -2.2
COF1YLL050C PRM4Q12498 284 aa1.29□□□□□ -2.2
COF1YLL050C TY3A-IQ99219 290 aa1.29□□□□□ -2.2
COF1YLL050C TDH3P00359 332 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
COF1YLL050C HIS1P00498 297 aaKnown RBP1.28□□□□□ -2.2
COF1YLL050C REP1P03871 373 aa1.28□□□□□ -2.2
COF1YLL050C MSF1P08425 469 aa1.28□□□□□ -2.2
COF1YLL050C MRP1P10662 321 aaKnown RBP1.28□□□□□ -2.2
COF1YLL050C SPT15P13393 240 aaKnown RBP1.28□□□□□ -2.2
COF1YLL050C POL30P15873 258 aaKnown RBP1.28□□□□□ -2.2
COF1YLL050C ERD1P16151 362 aa1.28□□□□□ -2.2
COF1YLL050C MET16P18408 261 aaPredicted RBP1.28□□□□□ -2.2
COF1YLL050C RPB4P20433 221 aaPredicted RBP1.28□□□□□ -2.2
COF1YLL050C ISY1P21374 235 aaPredicted RBP1.28□□□□□ -2.2
COF1YLL050C VPS3P23643 1011 aa1.28□□□□□ -2.2
COF1YLL050C RRT12P25381 491 aa1.28□□□□□ -2.2
COF1YLL050C YCR016WP25617 290 aaKnown RBP1.28□□□□□ -2.2
COF1YLL050C RPL16BP26785 198 aaKnown RBP1.28□□□□□ -2.2
COF1YLL050C CWP1P28319 239 aa1.28□□□□□ -2.2
COF1YLL050C URA10P30402 227 aa1.28□□□□□ -2.2
COF1YLL050C DEP1P31385 405 aa1.28□□□□□ -2.2
COF1YLL050C ARO4P32449 370 aaKnown RBP1.28□□□□□ -2.2
COF1YLL050C SRB4P32569 687 aa1.28□□□□□ -2.2
COF1YLL050C SUA5P32579 426 aa1.28□□□□□ -2.2
COF1YLL050C IMP3P32899 183 aaPredicted RBP1.28□□□□□ -2.2
COF1YLL050C CSE1P33307 960 aa1.28□□□□□ -2.2
COF1YLL050C MSN4P33749 630 aa1.28□□□□□ -2.2
COF1YLL050C YBL059WP34224 193 aa1.28□□□□□ -2.2
COF1YLL050C KTI12P34253 313 aaKnown RBP1.28□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms