RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE10	YGL228W	ALG3	P38179	458 aa		4.96	□□□□□ -1.62
SHE10	YGL228W	OM14	P38325	134 aa		4.96	□□□□□ -1.62
SHE10	YGL228W	YHR035W	P38769	630 aa		4.96	□□□□□ -1.62
SHE10	YGL228W	YHR180W	P38868	163 aa		4.96	□□□□□ -1.62
SHE10	YGL228W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
SHE10	YGL228W	YIL067C	P40514	678 aa		4.96	□□□□□ -1.62
SHE10	YGL228W	NAS2	P40555	220 aa		4.96	□□□□□ -1.62
SHE10	YGL228W	IRC5	P43610	853 aa		4.96	□□□□□ -1.62
SHE10	YGL228W	YGL101W	P53144	215 aa		4.96	□□□□□ -1.62
SHE10	YGL228W	RHO5	P53879	331 aa	Known RBP	4.96	□□□□□ -1.62
SHE10	YGL228W	CUZ1	P53899	274 aa		4.96	□□□□□ -1.62
SHE10	YGL228W	NEJ1	Q06148	342 aa		4.96	□□□□□ -1.62
SHE10	YGL228W	YPS7	Q06325	596 aa		4.96	□□□□□ -1.62
SHE10	YGL228W	HDA2	Q06629	674 aa		4.96	□□□□□ -1.62
SHE10	YGL228W	HRT1	Q08273	121 aa		4.96	□□□□□ -1.62
SHE10	YGL228W	RDR1	Q08904	546 aa		4.96	□□□□□ -1.62
SHE10	YGL228W	YOR389W	Q08912	624 aa		4.96	□□□□□ -1.62
SHE10	YGL228W	RKM1	Q08961	583 aa	Predicted RBP	4.96	□□□□□ -1.62
SHE10	YGL228W	MCP1	Q12106	302 aa		4.96	□□□□□ -1.62
SHE10	YGL228W	APC2	Q12440	853 aa		4.96	□□□□□ -1.62
SHE10	YGL228W	RPB8	P20436	146 aa		4.95	□□□□□ -1.62
SHE10	YGL228W	RAD51	P25454	400 aa		4.95	□□□□□ -1.62
SHE10	YGL228W	NAM9	P27929	486 aa		4.95	□□□□□ -1.62
SHE10	YGL228W	YPK3	P38070	525 aa		4.95	□□□□□ -1.62
SHE10	YGL228W	SHE1	P38200	338 aa		4.95	□□□□□ -1.62
SHE10	YGL228W	STS1	P38637	319 aa		4.95	□□□□□ -1.62
SHE10	YGL228W	YJL193W	P39542	402 aa		4.95	□□□□□ -1.62
SHE10	YGL228W	IRC6	P43615	237 aa		4.95	□□□□□ -1.62
SHE10	YGL228W	RBL2	P48606	106 aa	Known RBP	4.95	□□□□□ -1.62
SHE10	YGL228W	SCW11	P53189	542 aa		4.95	□□□□□ -1.62
SHE10	YGL228W	RRN9	P53437	365 aa		4.95	□□□□□ -1.62
SHE10	YGL228W	SNX41	Q04053	625 aa		4.95	□□□□□ -1.62
SHE10	YGL228W	YLR173W	Q06247	608 aa		4.95	□□□□□ -1.62
SHE10	YGL228W	YPQ2	Q06328	317 aa		4.95	□□□□□ -1.62
SHE10	YGL228W	RRG7	Q08774	242 aa	Predicted RBP	4.95	□□□□□ -1.62
SHE10	YGL228W	FRE5	Q08908	694 aa		4.95	□□□□□ -1.62
SHE10	YGL228W	YOR289W	Q12012	251 aa	Predicted RBP	4.95	□□□□□ -1.62
SHE10	YGL228W	YDL109C	Q12103	647 aa		4.95	□□□□□ -1.62
SHE10	YGL228W	HSP42	Q12329	375 aa		4.95	□□□□□ -1.62
SHE10	YGL228W	YRM1	Q12340	786 aa		4.95	□□□□□ -1.62
SHE10	YGL228W	YOS9	Q99220	542 aa		4.95	□□□□□ -1.62
SHE10	YGL228W	KIN28	P06242	306 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	CPR3	P25719	182 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
SHE10	YGL228W	YKL071W	P36086	256 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
SHE10	YGL228W	IES5	P40060	125 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	YTA6	P40328	754 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	RPE1	P46969	238 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	IKS1	P47042	667 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	BPL1	P48445	690 aa	Predicted RBP	4.94	□□□□□ -1.62
SHE10	YGL228W	NUP53	Q03790	475 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	GIS1	Q03833	894 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	DCR2	Q05924	578 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	TAZ1	Q06510	381 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	MDM36	Q06820	579 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	RAX1	Q08760	435 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	YRA1	Q12159	226 aa	Known RBP	4.94	□□□□□ -1.62
SHE10	YGL228W	PCL9	Q12477	304 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	YGR161W-C	Q3E744	92 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	GCN1	P33892	2672 aa	Known RBP	4.94	□□□□□ -1.62
SHE10	YGL228W	CTA1	P15202	515 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	PHO80	P20052	293 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	FPS1	P23900	669 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	RPL24B	P24000	155 aa	Known RBP	4.94	□□□□□ -1.62
SHE10	YGL228W	LDB16	P25587	256 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	CWH43	P25618	953 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	EDS1	P38073	919 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	PCL6	P40038	420 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	NTA1	P40354	457 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	PAM16	P42949	149 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	PGU1	P47180	361 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	COS10	P52924	374 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	RRP17	Q04031	235 aa	Predicted RBP	4.94	□□□□□ -1.62
SHE10	YGL228W	MGR3	Q04472	501 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	COQ10	Q08058	207 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	RLM1	Q12224	676 aa		4.94	□□□□□ -1.62
SHE10	YGL228W	CYT1	P07143	309 aa		4.93	□□□□□ -1.62
SHE10	YGL228W	HAP4	P14064	554 aa		4.93	□□□□□ -1.62
SHE10	YGL228W	NUP1	P20676	1076 aa		4.93	□□□□□ -1.62
SHE10	YGL228W	GAS1	P22146	559 aa	Known RBP	4.93	□□□□□ -1.62
SHE10	YGL228W	TRS65	P32893	560 aa		4.93	□□□□□ -1.62
SHE10	YGL228W	SUR1	P33300	382 aa		4.93	□□□□□ -1.62
SHE10	YGL228W	NIC96	P34077	839 aa		4.93	□□□□□ -1.62
SHE10	YGL228W	UTP11	P34247	250 aa	Predicted RBP	4.93	□□□□□ -1.62
SHE10	YGL228W	GPX1	P36014	167 aa		4.93	□□□□□ -1.62
SHE10	YGL228W	MAL32	P38158	584 aa		4.93	□□□□□ -1.62
SHE10	YGL228W	NVJ1	P38881	321 aa		4.93	□□□□□ -1.62
SHE10	YGL228W	FET3	P38993	636 aa		4.93	□□□□□ -1.62
SHE10	YGL228W	FMC1	P40491	155 aa		4.93	□□□□□ -1.62
SHE10	YGL228W	IDS2	P46958	469 aa		4.93	□□□□□ -1.62
SHE10	YGL228W	MDE1	P47095	244 aa		4.93	□□□□□ -1.62
SHE10	YGL228W	PPT1	P53043	513 aa		4.93	□□□□□ -1.62
SHE10	YGL228W	BRR6	P53062	197 aa		4.93	□□□□□ -1.62
SHE10	YGL228W	MAL12	P53341	584 aa		4.93	□□□□□ -1.62
SHE10	YGL228W	MPP6	P53725	186 aa	Predicted RBP	4.93	□□□□□ -1.62
SHE10	YGL228W	CGI121	Q03705	181 aa	Known RBP	4.93	□□□□□ -1.62
SHE10	YGL228W	GAL83	Q04739	417 aa		4.93	□□□□□ -1.62
SHE10	YGL228W	COX20	Q04935	205 aa		4.93	□□□□□ -1.62
SHE10	YGL228W	YPR109W	Q06104	294 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 53.2 ms