Protein–RNA interactions for Protein: P38200

SHE1, Mitotic spindle-associated protein SHE1, yeastyeast

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE1P38200 NSR1YGR159C 1245 nt18.29■□□□□ 0.52
SHE1P38200 YML009W-BYML009W-B 477 nt18.04■□□□□ 0.48
SHE1P38200 NOP1YDL014W 984 nt17.39■□□□□ 0.37
SHE1P38200 MDJ1YFL016C 1536 nt16.6■□□□□ 0.25
SHE1P38200 YKL036CYKL036C 393 nt15.69■□□□□ 0.1
SHE1P38200 YJL027CYJL027C 417 nt15.27■□□□□ 0.04
SHE1P38200 SRX1YKL086W 384 nt15.21■□□□□ 0.03
SHE1P38200 Q0297Q0297 156 nt15.12■□□□□ 0.01
SHE1P38200 DBP2YNL112W 1641 nt14.55□□□□□ -0.08
SHE1P38200 YCR051WYCR051W 669 nt14.38□□□□□ -0.11
SHE1P38200 YBR190WYBR190W 312 nt14.26□□□□□ -0.13
SHE1P38200 SCS3YGL126W 1143 nt14.08□□□□□ -0.16
SHE1P38200 TRN1tP(UGG)A 72 nt13.98□□□□□ -0.17
SHE1P38200 SUF9tP(UGG)F 72 nt13.98□□□□□ -0.17
SHE1P38200 SUF8tP(UGG)H 72 nt13.98□□□□□ -0.17
SHE1P38200 tP(UGG)LtP(UGG)L 72 nt13.98□□□□□ -0.17
SHE1P38200 SUF7tP(UGG)M 72 nt13.98□□□□□ -0.17
SHE1P38200 tP(UGG)N1tP(UGG)N1 72 nt13.98□□□□□ -0.17
SHE1P38200 tP(UGG)N2tP(UGG)N2 72 nt13.98□□□□□ -0.17
SHE1P38200 tP(UGG)O1tP(UGG)O1 72 nt13.98□□□□□ -0.17
SHE1P38200 SUF11tP(UGG)O2 72 nt13.98□□□□□ -0.17
SHE1P38200 RTC3YHR087W 336 nt13.9□□□□□ -0.18
SHE1P38200 CCC1YLR220W 969 nt13.82□□□□□ -0.2
SHE1P38200 YOL085CYOL085C 342 nt13.62□□□□□ -0.23
SHE1P38200 RPP1BYDL130W 321 nt13.56□□□□□ -0.24
SHE1P38200 RVS167YDR388W 1449 nt13.55□□□□□ -0.24
SHE1P38200 PKP1YIL042C 1185 nt13.45□□□□□ -0.26
SHE1P38200 SCJ1YMR214W 1134 nt13.43□□□□□ -0.26
SHE1P38200 SSA3YBL075C 1950 nt13.29□□□□□ -0.28
SHE1P38200 PUT4YOR348C 1884 nt13.25□□□□□ -0.29
SHE1P38200 tP(UGG)O3tP(UGG)O3 72 nt13.1□□□□□ -0.31
SHE1P38200 SHR5YOL110W 714 nt13.01□□□□□ -0.33
SHE1P38200 PET122YER153C 765 nt13□□□□□ -0.33
SHE1P38200 ARE1YCR048W 1833 nt12.89□□□□□ -0.35
SHE1P38200 URN1YPR152C 1398 nt12.88□□□□□ -0.35
SHE1P38200 POA1YBR022W 534 nt12.8□□□□□ -0.36
SHE1P38200 SAH1YER043C 1350 nt12.8□□□□□ -0.36
SHE1P38200 OPI9YLR338W 858 nt12.79□□□□□ -0.36
SHE1P38200 DEP1YAL013W 1218 nt12.76□□□□□ -0.37
SHE1P38200 SCR1SCR1 522 nt12.73□□□□□ -0.37
SHE1P38200 YHR049C-AYHR049C-A 297 nt12.71□□□□□ -0.37
SHE1P38200 YDJ1YNL064C 1230 nt12.68□□□□□ -0.38
SHE1P38200 BSC6YOL137W 1494 nt12.59□□□□□ -0.39
SHE1P38200 RRN5YLR141W 1092 nt12.59□□□□□ -0.39
SHE1P38200 RPN10YHR200W 807 nt12.58□□□□□ -0.4
SHE1P38200 YNL208WYNL208W 600 nt12.53□□□□□ -0.4
SHE1P38200 ATS1YAL020C 1002 nt12.49□□□□□ -0.41
SHE1P38200 GAR1YHR089C 618 nt12.44□□□□□ -0.42
SHE1P38200 PUN1YLR414C 792 nt12.39□□□□□ -0.43
SHE1P38200 BUD23YCR047C 828 nt12.37□□□□□ -0.43
SHE1P38200 YER088W-BYER088W-B 147 nt12.34□□□□□ -0.43
SHE1P38200 SPT5YML010W 3192 nt12.32□□□□□ -0.44
SHE1P38200 PTC2YER089C 1395 nt12.31□□□□□ -0.44
SHE1P38200 YJR018WYJR018W 363 nt12.27□□□□□ -0.45
SHE1P38200 NAB2YGL122C 1578 nt12.21□□□□□ -0.46
SHE1P38200 RSB1YOR049C 1065 nt12.19□□□□□ -0.46
SHE1P38200 TIR1YER011W 765 nt12.05□□□□□ -0.48
SHE1P38200 SSA4YER103W 1929 nt12.04□□□□□ -0.48
SHE1P38200 YJR120WYJR120W 351 nt12.03□□□□□ -0.48
SHE1P38200 FIS1YIL065C 468 nt12.01□□□□□ -0.49
SHE1P38200 SSA1YAL005C 1929 nt11.99□□□□□ -0.49
SHE1P38200 DAL1YIR027C 1383 nt11.97□□□□□ -0.49
SHE1P38200 FPR4YLR449W 1179 nt11.92□□□□□ -0.5
SHE1P38200 RPP2BYDR382W 333 nt11.9□□□□□ -0.5
SHE1P38200 INM2YDR287W 879 nt11.88□□□□□ -0.51
SHE1P38200 MEP2YNL142W 1500 nt11.87□□□□□ -0.51
SHE1P38200 PHO4YFR034C 939 nt11.86□□□□□ -0.51
SHE1P38200 YPS1YLR120C 1710 nt11.77□□□□□ -0.52
SHE1P38200 SRB2YHR041C 633 nt11.74□□□□□ -0.53
SHE1P38200 YBL100CYBL100C 315 nt11.7□□□□□ -0.54
SHE1P38200 DCW1YKL046C 1350 nt11.67□□□□□ -0.54
SHE1P38200 PST2YDR032C 597 nt11.65□□□□□ -0.54
SHE1P38200 YHR165W-AYHR165W-A 312 nt11.65□□□□□ -0.54
SHE1P38200 YDR095CYDR095C 411 nt11.64□□□□□ -0.55
SHE1P38200 BDH2YAL061W 1254 nt11.62□□□□□ -0.55
SHE1P38200 BDF1YLR399C 2061 nt11.62□□□□□ -0.55
SHE1P38200 FUN26YAL022C 1554 nt11.56□□□□□ -0.56
SHE1P38200 EMI2YDR516C 1503 nt11.51□□□□□ -0.57
SHE1P38200 WWM1YFL010C 636 nt11.46□□□□□ -0.57
SHE1P38200 TAT1YBR069C 1860 nt11.46□□□□□ -0.58
SHE1P38200 TRM9YML014W 840 nt11.45□□□□□ -0.58
SHE1P38200 PTP1YDL230W 1008 nt11.44□□□□□ -0.58
SHE1P38200 YMR090WYMR090W 684 nt11.44□□□□□ -0.58
SHE1P38200 ALF1YNL148C 765 nt11.44□□□□□ -0.58
SHE1P38200 YBR220CYBR220C 1683 nt11.43□□□□□ -0.58
SHE1P38200 RPP2AYOL039W 321 nt11.43□□□□□ -0.58
SHE1P38200 CAC2YML102W 1407 nt11.42□□□□□ -0.58
SHE1P38200 LSM3YLR438C-A 270 nt11.4□□□□□ -0.58
SHE1P38200 YDL221WYDL221W 552 nt11.39□□□□□ -0.59
SHE1P38200 CCT6YDR188W 1641 nt11.37□□□□□ -0.59
SHE1P38200 SDH1YKL148C 1923 nt11.33□□□□□ -0.6
SHE1P38200 SIS1YNL007C 1059 nt11.32□□□□□ -0.6
SHE1P38200 YFL021C-AYFL021C-A 855 nt11.28□□□□□ -0.6
SHE1P38200 YGR021WYGR021W 873 nt11.27□□□□□ -0.61
SHE1P38200 SUF2tP(AGG)C 72 nt11.27□□□□□ -0.61
SHE1P38200 SUF10tP(AGG)N 72 nt11.27□□□□□ -0.61
SHE1P38200 SHU1YHL006C 453 nt11.26□□□□□ -0.61
SHE1P38200 IRC15YPL017C 1500 nt11.25□□□□□ -0.61
SHE1P38200 HOM6YJR139C 1080 nt11.22□□□□□ -0.61
SHE1P38200 YAL037C-BYAL037C-B 975 nt11.21□□□□□ -0.61
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms