RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	PCL7	P40186	285 aa		0.99	□□□□□ -2.25
CSN9	YDR179C	YGL118C	P53132	145 aa		0.99	□□□□□ -2.25
CSN9	YDR179C	RET3	P53600	189 aa		0.99	□□□□□ -2.25
CSN9	YDR179C	YNL095C	P53932	642 aa		0.99	□□□□□ -2.25
CSN9	YDR179C	MEH1	Q02205	184 aa		0.99	□□□□□ -2.25
CSN9	YDR179C	YMR244W	Q04018	355 aa		0.99	□□□□□ -2.25
CSN9	YDR179C	YOL075C	Q08234	1294 aa		0.99	□□□□□ -2.25
CSN9	YDR179C	FEX1	Q08913	375 aa		0.99	□□□□□ -2.25
CSN9	YDR179C	FEX2	Q08991	375 aa		0.99	□□□□□ -2.25
CSN9	YDR179C	ADH3	P07246	375 aa	Known RBP	0.98	□□□□□ -2.25
CSN9	YDR179C	YKL187C	P34231	750 aa		0.98	□□□□□ -2.25
CSN9	YDR179C	SRP72	P38688	640 aa	Known RBP	0.98	□□□□□ -2.25
CSN9	YDR179C	SLM1	P40485	686 aa		0.98	□□□□□ -2.25
CSN9	YDR179C	FMP48	P53233	369 aa		0.98	□□□□□ -2.25
CSN9	YDR179C	LST7	P53237	242 aa		0.98	□□□□□ -2.25
CSN9	YDR179C	MSK1	P32048	576 aa		0.97	□□□□□ -2.25
CSN9	YDR179C	YHR177W	P38867	453 aa		0.97	□□□□□ -2.25
CSN9	YDR179C	LCP5	P40079	357 aa	Predicted RBP	0.97	□□□□□ -2.25
CSN9	YDR179C	SYF2	P53277	215 aa	Predicted RBP	0.97	□□□□□ -2.25
CSN9	YDR179C	RPN5	Q12250	445 aa	Known RBP	0.97	□□□□□ -2.25
CSN9	YDR179C	TRM10	Q12400	293 aa		0.97	□□□□□ -2.25
CSN9	YDR179C	BEM2	P39960	2167 aa	Known RBP	0.97	□□□□□ -2.25
CSN9	YDR179C	FAR1	P21268	830 aa		0.96	□□□□□ -2.26
CSN9	YDR179C	CLB6	P32943	380 aa		0.96	□□□□□ -2.26
CSN9	YDR179C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	0.96	□□□□□ -2.26	not detected
CSN9	YDR179C	SPH1	Q06160	661 aa		0.96	□□□□□ -2.26
CSN9	YDR179C	GPM3	Q12326	303 aa		0.96	□□□□□ -2.26
CSN9	YDR179C	TFC7	Q12415	435 aa		0.96	□□□□□ -2.26
CSN9	YDR179C	MHP1	P43638	1398 aa		0.96	□□□□□ -2.26
CSN9	YDR179C	YOL163W	P0CF20	169 aa		0.95	□□□□□ -2.26
CSN9	YDR179C	DAP2	P18962	818 aa		0.95	□□□□□ -2.26
CSN9	YDR179C	ARF2	P19146	181 aa	Known RBP	0.95	□□□□□ -2.26
CSN9	YDR179C	CAB3	P36076	571 aa		0.95	□□□□□ -2.26
CSN9	YDR179C	MED6	P38782	295 aa		0.95	□□□□□ -2.26
CSN9	YDR179C	LCB2	P40970	561 aa		0.95	□□□□□ -2.26
CSN9	YDR179C	LSG1	P53145	640 aa	Known RBP	0.95	□□□□□ -2.26
CSN9	YDR179C	MPS2	P53159	387 aa		0.95	□□□□□ -2.26
CSN9	YDR179C	SDS23	P53172	527 aa		0.95	□□□□□ -2.26
CSN9	YDR179C	AQR1	P53943	586 aa		0.95	□□□□□ -2.26
CSN9	YDR179C	YNL040W	P53960	456 aa	Predicted RBP	0.95	□□□□□ -2.26
CSN9	YDR179C	CIK1	Q01649	594 aa		0.95	□□□□□ -2.26
CSN9	YDR179C	TAF10	Q12030	206 aa		0.95	□□□□□ -2.26
CSN9	YDR179C	TY3A-G	Q12173	290 aa		0.95	□□□□□ -2.26
CSN9	YDR179C	ERP3	Q12403	225 aa		0.95	□□□□□ -2.26
CSN9	YDR179C	TY3A-I	Q99219	290 aa		0.95	□□□□□ -2.26
CSN9	YDR179C	MLH1	P38920	769 aa		0.94	□□□□□ -2.26
CSN9	YDR179C	YER084W	P40057	128 aa		0.94	□□□□□ -2.26
CSN9	YDR179C	SNL1	P40548	159 aa		0.94	□□□□□ -2.26
CSN9	YDR179C	CGI121	Q03705	181 aa	Known RBP	0.94	□□□□□ -2.26
CSN9	YDR179C	DTD1	Q07648	150 aa	Known RBP	0.94	□□□□□ -2.26
CSN9	YDR179C	PEX27	Q08580	376 aa		0.94	□□□□□ -2.26
CSN9	YDR179C	SPE3	Q12074	293 aa	Known RBP	0.94	□□□□□ -2.26
CSN9	YDR179C	FSH3	Q99369	266 aa		0.94	□□□□□ -2.26
CSN9	YDR179C	RPL1A	P0CX43	217 aa	Known RBP	0.93	□□□□□ -2.26
CSN9	YDR179C	RPL1B	P0CX44	217 aa	Known RBP	0.93	□□□□□ -2.26
CSN9	YDR179C	PHO80	P20052	293 aa		0.93	□□□□□ -2.26
CSN9	YDR179C	VPS1	P21576	704 aa	Known RBP	0.93	□□□□□ -2.26
CSN9	YDR179C	DBR1	P24309	405 aa	Known RBP	0.93	□□□□□ -2.26
CSN9	YDR179C	PSO2	P30620	661 aa		0.93	□□□□□ -2.26
CSN9	YDR179C	YEL043W	P32618	956 aa		0.93	□□□□□ -2.26
CSN9	YDR179C	KTI12	P34253	313 aa	Known RBP	0.93	□□□□□ -2.26
CSN9	YDR179C	PES4	P39684	611 aa		0.93	□□□□□ -2.26
CSN9	YDR179C	EDC2	P40023	145 aa	Predicted RBP	0.93	□□□□□ -2.26
CSN9	YDR179C	SMP3	Q04174	516 aa		0.93	□□□□□ -2.26
CSN9	YDR179C	YPR078C	Q06813	372 aa		0.93	□□□□□ -2.26
CSN9	YDR179C	BUD21	Q08492	214 aa	Predicted RBP	0.93	□□□□□ -2.26
CSN9	YDR179C	YAK1	P14680	807 aa		0.92	□□□□□ -2.26
CSN9	YDR179C	MRPL20	P22354	195 aa	Predicted RBP	0.92	□□□□□ -2.26
CSN9	YDR179C	RRT12	P25381	491 aa		0.92	□□□□□ -2.26
CSN9	YDR179C	ERG9	P29704	444 aa		0.92	□□□□□ -2.26
CSN9	YDR179C	VPH2	P32341	215 aa		0.92	□□□□□ -2.26
CSN9	YDR179C	GDT1	P38301	280 aa	Predicted RBP	0.92	□□□□□ -2.26
CSN9	YDR179C	DSE1	P40077	573 aa		0.92	□□□□□ -2.26
CSN9	YDR179C	EPL1	P43572	832 aa		0.92	□□□□□ -2.26
CSN9	YDR179C	PMT4	P46971	762 aa		0.92	□□□□□ -2.26
CSN9	YDR179C	SUB1	P54000	292 aa	Known RBP	0.92	□□□□□ -2.26
CSN9	YDR179C	VPS9	P54787	451 aa		0.92	□□□□□ -2.26
CSN9	YDR179C	ACT1	P60010	375 aa	Known RBP	0.92	□□□□□ -2.26
CSN9	YDR179C	UBX2	Q04228	584 aa		0.92	□□□□□ -2.26
CSN9	YDR179C	CSM3	Q04659	317 aa		0.92	□□□□□ -2.26
CSN9	YDR179C	APC5	Q08683	685 aa		0.92	□□□□□ -2.26
CSN9	YDR179C	TIM22	Q12328	207 aa		0.92	□□□□□ -2.26
CSN9	YDR179C	PFK27	Q12471	397 aa	Predicted RBP	0.92	□□□□□ -2.26
CSN9	YDR179C	PRM4	Q12498	284 aa		0.92	□□□□□ -2.26
CSN9	YDR179C	MPE1	P35728	441 aa	Known RBP	0.91	□□□□□ -2.26
CSN9	YDR179C	POP2	P39008	433 aa		0.91	□□□□□ -2.26
CSN9	YDR179C	UFD1	P53044	361 aa		0.91	□□□□□ -2.26
CSN9	YDR179C	RSM27	P53305	110 aa		0.91	□□□□□ -2.26
CSN9	YDR179C	HCH1	P53834	153 aa		0.91	□□□□□ -2.26
CSN9	YDR179C	AIM33	Q04516	312 aa		0.91	□□□□□ -2.26
CSN9	YDR179C	YFH1	Q07540	174 aa		0.91	□□□□□ -2.26
CSN9	YDR179C	YPL245W	Q12179	454 aa	Known RBP	0.91	□□□□□ -2.26
CSN9	YDR179C	RPN6	Q12377	434 aa		0.91	□□□□□ -2.26
CSN9	YDR179C	CBP2	P03874	630 aa	Predicted RBP	0.9	□□□□□ -2.27
CSN9	YDR179C	GRR1	P24814	1151 aa		0.9	□□□□□ -2.27
CSN9	YDR179C	MRPS5	P33759	307 aa		0.9	□□□□□ -2.27
CSN9	YDR179C	NRG2	P38082	220 aa		0.9	□□□□□ -2.27
CSN9	YDR179C	YHL044W	P38727	235 aa		0.9	□□□□□ -2.27
CSN9	YDR179C	ATG7	P38862	630 aa		0.9	□□□□□ -2.27
CSN9	YDR179C	YER188W	P40103	239 aa		0.9	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms