RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B IPK1Q06667 281 aa0.7□□□□□ -2.3
HTL1YCR020W-B TAF10Q12030 206 aa0.7□□□□□ -2.3
HTL1YCR020W-B GPM3Q12326 303 aa0.7□□□□□ -2.3
HTL1YCR020W-B MHP1P43638 1398 aa0.7□□□□□ -2.3
HTL1YCR020W-B RPC53P25441 422 aa0.69□□□□□ -2.3
HTL1YCR020W-B SMF2P38778 549 aa0.69□□□□□ -2.3
HTL1YCR020W-B SYF2P53277 215 aaPredicted RBP0.69□□□□□ -2.3
HTL1YCR020W-B YNL095CP53932 642 aa0.69□□□□□ -2.3
HTL1YCR020W-B YEL043WP32618 956 aa0.68□□□□□ -2.3
HTL1YCR020W-B SRP72P38688 640 aaKnown RBP0.68□□□□□ -2.3
HTL1YCR020W-B ASP1P38986 381 aaPredicted RBP0.68□□□□□ -2.3
HTL1YCR020W-B DSE1P40077 573 aa0.68□□□□□ -2.3
HTL1YCR020W-B SLM1P40485 686 aa0.68□□□□□ -2.3
HTL1YCR020W-B DSK2P48510 373 aa0.68□□□□□ -2.3
HTL1YCR020W-B LST7P53237 242 aa0.68□□□□□ -2.3
HTL1YCR020W-B RDS3Q06835 107 aaPredicted RBP0.68□□□□□ -2.3
HTL1YCR020W-B BUD21Q08492 214 aaPredicted RBP0.68□□□□□ -2.3
HTL1YCR020W-B RPN8Q08723 338 aaKnown RBP0.68□□□□□ -2.3
HTL1YCR020W-B ADH3P07246 375 aaKnown RBP0.67□□□□□ -2.3
HTL1YCR020W-B DBR1P24309 405 aaKnown RBP0.67□□□□□ -2.3
HTL1YCR020W-B EFB1P32471 206 aaKnown RBP0.67□□□□□ -2.3
HTL1YCR020W-B VAM7P32912 316 aa0.67□□□□□ -2.3
HTL1YCR020W-B CTM1P38818 585 aa0.67□□□□□ -2.3
HTL1YCR020W-B SNL1P40548 159 aa0.67□□□□□ -2.3
HTL1YCR020W-B YOR283WQ12040 230 aaKnown RBP0.67□□□□□ -2.3
HTL1YCR020W-B TFC7Q12415 435 aa0.67□□□□□ -2.3
HTL1YCR020W-B FAR1P21268 830 aa0.66□□□□□ -2.3
HTL1YCR020W-B MSK1P32048 576 aa0.66□□□□□ -2.3
HTL1YCR020W-B ATG7P38862 630 aa0.66□□□□□ -2.3
HTL1YCR020W-B SRB7P47822 140 aa0.66□□□□□ -2.3
HTL1YCR020W-B TPC1P53257 314 aa0.66□□□□□ -2.3
HTL1YCR020W-B AIM33Q04516 312 aa0.66□□□□□ -2.3
HTL1YCR020W-B RPN6Q12377 434 aa0.66□□□□□ -2.3
HTL1YCR020W-B CSE1P33307 960 aa0.65□□□□□ -2.31
HTL1YCR020W-B JNM1P36224 373 aa0.65□□□□□ -2.31
HTL1YCR020W-B EPL1P43572 832 aa0.65□□□□□ -2.31
HTL1YCR020W-B YFR054CP43622 192 aa0.65□□□□□ -2.31
HTL1YCR020W-B LSG1P53145 640 aaKnown RBP0.65□□□□□ -2.31
HTL1YCR020W-B RET3P53600 189 aa0.65□□□□□ -2.31
HTL1YCR020W-B YNL040WP53960 456 aaPredicted RBP0.65□□□□□ -2.31
HTL1YCR020W-B GYL1Q04322 720 aa0.65□□□□□ -2.31
HTL1YCR020W-B MYO5Q04439 1219 aaKnown RBP0.65□□□□□ -2.31
HTL1YCR020W-B PEX27Q08580 376 aa0.65□□□□□ -2.31
HTL1YCR020W-B SRN2Q99176 213 aa0.65□□□□□ -2.31
HTL1YCR020W-B FSH3Q99369 266 aa0.65□□□□□ -2.31
HTL1YCR020W-B DAP2P18962 818 aa0.64□□□□□ -2.31
HTL1YCR020W-B CDC42P19073 191 aa0.64□□□□□ -2.31
HTL1YCR020W-B PHO80P20052 293 aa0.64□□□□□ -2.31
HTL1YCR020W-B PRE7P23724 241 aaKnown RBP0.64□□□□□ -2.31
HTL1YCR020W-B NRG2P38082 220 aa0.64□□□□□ -2.31
HTL1YCR020W-B PMT4P46971 762 aa0.64□□□□□ -2.31
HTL1YCR020W-B DAN1P47178 298 aa0.64□□□□□ -2.31
HTL1YCR020W-B SSU72P53538 206 aaPredicted RBP0.64□□□□□ -2.31
HTL1YCR020W-B SMP3Q04174 516 aa0.64□□□□□ -2.31
HTL1YCR020W-B YHR086W-AQ3E746 53 aa0.64□□□□□ -2.31
HTL1YCR020W-B RPL1AP0CX43 217 aaKnown RBP0.63□□□□□ -2.31
HTL1YCR020W-B RPL1BP0CX44 217 aaKnown RBP0.63□□□□□ -2.31
HTL1YCR020W-B YAK1P14680 807 aa0.63□□□□□ -2.31
HTL1YCR020W-B YKL187CP34231 750 aa0.63□□□□□ -2.31
HTL1YCR020W-B KTI12P34253 313 aaKnown RBP0.63□□□□□ -2.31
HTL1YCR020W-B YBL028CP38202 106 aa0.63□□□□□ -2.31
HTL1YCR020W-B MLH1P38920 769 aa0.63□□□□□ -2.31
HTL1YCR020W-B EDC2P40023 145 aaPredicted RBP0.63□□□□□ -2.31
HTL1YCR020W-B SDS23P53172 527 aa0.63□□□□□ -2.31
HTL1YCR020W-B UBX2Q04228 584 aa0.63□□□□□ -2.31
HTL1YCR020W-B CSM3Q04659 317 aa0.63□□□□□ -2.31
HTL1YCR020W-B MIM1Q08176 113 aa0.63□□□□□ -2.31
HTL1YCR020W-B SPE3Q12074 293 aaKnown RBP0.63□□□□□ -2.31
HTL1YCR020W-B TIM22Q12328 207 aa0.63□□□□□ -2.31
HTL1YCR020W-B TRM10Q12400 293 aa0.63□□□□□ -2.31
HTL1YCR020W-B ERP3Q12403 225 aa0.63□□□□□ -2.31
HTL1YCR020W-B CBP2P03874 630 aaPredicted RBP0.62□□□□□ -2.31
HTL1YCR020W-B YOL163WP0CF20 169 aa0.62□□□□□ -2.31
HTL1YCR020W-B RPS16AP0CX51 143 aaKnown RBP0.62□□□□□ -2.31
HTL1YCR020W-B RPS16BP0CX52 143 aaKnown RBP0.62□□□□□ -2.31
HTL1YCR020W-B ARF2P19146 181 aaKnown RBP0.62□□□□□ -2.31
HTL1YCR020W-B CLB6P32943 380 aa0.62□□□□□ -2.31
HTL1YCR020W-B MRPS5P33759 307 aa0.62□□□□□ -2.31
HTL1YCR020W-B CAB3P36076 571 aa0.62□□□□□ -2.31
HTL1YCR020W-B POP2P39008 433 aa0.62□□□□□ -2.31
HTL1YCR020W-B PIR5P46999 287 aa0.62□□□□□ -2.31
HTL1YCR020W-B AQR1P53943 586 aa0.62□□□□□ -2.31
HTL1YCR020W-B ACT1P60010 375 aaKnown RBP0.62□□□□□ -2.31
HTL1YCR020W-B CGI121Q03705 181 aaKnown RBP0.62□□□□□ -2.31
HTL1YCR020W-B YMR166CQ03829 368 aa0.62□□□□□ -2.31
HTL1YCR020W-B SUE1Q06524 206 aa0.62□□□□□ -2.31
HTL1YCR020W-B YPR078CQ06813 372 aa0.62□□□□□ -2.31
HTL1YCR020W-B TY3A-GQ12173 290 aa0.62□□□□□ -2.31
HTL1YCR020W-B RPN5Q12250 445 aaKnown RBP0.62□□□□□ -2.31
HTL1YCR020W-B TY3A-IQ99219 290 aa0.62□□□□□ -2.31
HTL1YCR020W-B CKI1P20485 582 aa0.61□□□□□ -2.31
HTL1YCR020W-B VPS1P21576 704 aaKnown RBP0.61□□□□□ -2.31
HTL1YCR020W-B PSO2P30620 661 aa0.61□□□□□ -2.31
HTL1YCR020W-B LCP5P40079 357 aaPredicted RBP0.61□□□□□ -2.31
HTL1YCR020W-B BUD27P43573 796 aaKnown RBP RIP-Chip data0.61□□□□□ -2.31not detected
HTL1YCR020W-B MIG2P53035 382 aa0.61□□□□□ -2.31
HTL1YCR020W-B NAT4Q04751 285 aa0.61□□□□□ -2.31
HTL1YCR020W-B APC5Q08683 685 aa0.61□□□□□ -2.31
HTL1YCR020W-B SPS100P13130 326 aa0.6□□□□□ -2.31
HTL1YCR020W-B EFM4P40516 257 aa0.6□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms