RNA–Protein interactions for RNA: YPL058C

PDR12, Transcript of Plasma membrane ATP-binding cassette (ABC) transporter, yeast

Gene PDR12, Length 4,536 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR12	YPL058C	RPN1	P38764	993 aa	Known RBP	4.98	□□□□□ -1.61
PDR12	YPL058C	AOS1	Q06624	347 aa		4.98	□□□□□ -1.61
PDR12	YPL058C	CPS1	P27614	576 aa		4.97	□□□□□ -1.61
PDR12	YPL058C	SGD1	Q06132	899 aa		4.97	□□□□□ -1.61
PDR12	YPL058C	RPS9A	O13516	197 aa	Known RBP	4.97	□□□□□ -1.61
PDR12	YPL058C	CST9	Q06032	482 aa		4.97	□□□□□ -1.61
PDR12	YPL058C	TYW1	Q08960	810 aa	Known RBP	4.97	□□□□□ -1.61
PDR12	YPL058C	LDH1	P38139	375 aa		4.96	□□□□□ -1.61
PDR12	YPL058C	VAB2	P40003	282 aa		4.96	□□□□□ -1.61
PDR12	YPL058C	SEC20	P28791	383 aa		4.96	□□□□□ -1.62
PDR12	YPL058C	MCD4	P36051	919 aa		4.96	□□□□□ -1.62
PDR12	YPL058C	PUS6	P53294	404 aa		4.96	□□□□□ -1.62
PDR12	YPL058C	VPS53	P47061	822 aa		4.96	□□□□□ -1.62
PDR12	YPL058C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
PDR12	YPL058C	RRG1	Q12167	365 aa	Predicted RBP	4.95	□□□□□ -1.62
PDR12	YPL058C	AFG2	P32794	780 aa		4.95	□□□□□ -1.62
PDR12	YPL058C	PEA2	P40091	420 aa		4.95	□□□□□ -1.62
PDR12	YPL058C	GRE2	Q12068	342 aa	Known RBP	4.95	□□□□□ -1.62
PDR12	YPL058C	ATG20	Q07528	640 aa		4.95	□□□□□ -1.62
PDR12	YPL058C	TPS3	P38426	1054 aa	Known RBP	4.94	□□□□□ -1.62
PDR12	YPL058C	MSB3	P48566	633 aa	Predicted RBP	4.94	□□□□□ -1.62
PDR12	YPL058C	ADE6	P38972	1358 aa	Known RBP	4.94	□□□□□ -1.62
PDR12	YPL058C	RTC1	Q08281	1341 aa		4.94	□□□□□ -1.62
PDR12	YPL058C	LYS14	P40971	790 aa		4.94	□□□□□ -1.62
PDR12	YPL058C	SPR3	P41901	512 aa		4.93	□□□□□ -1.62
PDR12	YPL058C	ERO1	Q03103	563 aa		4.93	□□□□□ -1.62
PDR12	YPL058C	PSF2	P40359	213 aa		4.93	□□□□□ -1.62
PDR12	YPL058C	FOX2	Q02207	900 aa	Known RBP	4.93	□□□□□ -1.62
PDR12	YPL058C	RBA50	Q04418	439 aa		4.92	□□□□□ -1.62
PDR12	YPL058C	NOP53	Q12080	455 aa	Known RBP	4.92	□□□□□ -1.62
PDR12	YPL058C	KIP3	P53086	805 aa	Known RBP	4.92	□□□□□ -1.62
PDR12	YPL058C	TRM44	Q02648	567 aa	Known RBP	4.92	□□□□□ -1.62
PDR12	YPL058C	FRK1	Q03002	865 aa	Predicted RBP	4.92	□□□□□ -1.62
PDR12	YPL058C	RAV1	P47104	1357 aa		4.92	□□□□□ -1.62
PDR12	YPL058C	EAF6	P47128	113 aa		4.92	□□□□□ -1.62
PDR12	YPL058C	RPS24A	P0CX31	135 aa	Known RBP	4.91	□□□□□ -1.62
PDR12	YPL058C	RPS24B	P0CX32	135 aa	Known RBP	4.91	□□□□□ -1.62
PDR12	YPL058C	BUD2	P33314	1104 aa		4.91	□□□□□ -1.62
PDR12	YPL058C	GPT2	P36148	743 aa		4.91	□□□□□ -1.62
PDR12	YPL058C	UGA3	P26370	528 aa		4.91	□□□□□ -1.62
PDR12	YPL058C	ERT1	P38140	529 aa		4.91	□□□□□ -1.62
PDR12	YPL058C	TEA1	P47988	759 aa		4.91	□□□□□ -1.62
PDR12	YPL058C	MET7	Q08645	548 aa		4.91	□□□□□ -1.62
PDR12	YPL058C	MHP1	P43638	1398 aa		4.91	□□□□□ -1.62
PDR12	YPL058C	ARO1	P08566	1588 aa	Known RBP	4.9	□□□□□ -1.63
PDR12	YPL058C	SIT4	P20604	311 aa		4.89	□□□□□ -1.63
PDR12	YPL058C	KCC4	P25389	1037 aa		4.89	□□□□□ -1.63
PDR12	YPL058C	ACK1	Q07622	623 aa	Predicted RBP	4.89	□□□□□ -1.63
PDR12	YPL058C	NPR2	P39923	615 aa		4.89	□□□□□ -1.63
PDR12	YPL058C	JJJ2	P46997	583 aa		4.89	□□□□□ -1.63
PDR12	YPL058C	SVF1	Q05515	481 aa		4.89	□□□□□ -1.63
PDR12	YPL058C	APE3	P37302	537 aa	Known RBP	4.89	□□□□□ -1.63
PDR12	YPL058C	SRC1	Q03707	834 aa		4.89	□□□□□ -1.63
PDR12	YPL058C	CTI6	Q08923	506 aa		4.89	□□□□□ -1.63
PDR12	YPL058C	GIN4	Q12263	1142 aa		4.89	□□□□□ -1.63
PDR12	YPL058C	PES4	P39684	611 aa		4.89	□□□□□ -1.63
PDR12	YPL058C	EMP47	P43555	445 aa		4.89	□□□□□ -1.63
PDR12	YPL058C	IOC3	P43596	787 aa		4.89	□□□□□ -1.63
PDR12	YPL058C	HAT1	Q12341	374 aa		4.89	□□□□□ -1.63
PDR12	YPL058C	CHC1	P22137	1653 aa	Known RBP	4.88	□□□□□ -1.63
PDR12	YPL058C	IKI3	Q06706	1349 aa	Known RBP	4.88	□□□□□ -1.63
PDR12	YPL058C	SMY2	P32909	740 aa	Known RBP	4.88	□□□□□ -1.63
PDR12	YPL058C	SPT2	P06843	333 aa	Predicted RBP	4.88	□□□□□ -1.63
PDR12	YPL058C	CTH1	P47976	325 aa		4.88	□□□□□ -1.63
PDR12	YPL058C	GAS4	Q08271	471 aa		4.88	□□□□□ -1.63
PDR12	YPL058C	SEC7	P11075	2009 aa	Known RBP	4.88	□□□□□ -1.63
PDR12	YPL058C	SPT5	P27692	1063 aa	Known RBP	4.87	□□□□□ -1.63
PDR12	YPL058C	FAA3	P39002	694 aa		4.87	□□□□□ -1.63
PDR12	YPL058C	FET4	P40988	552 aa		4.87	□□□□□ -1.63
PDR12	YPL058C	SNU71	P53207	620 aa	Known RBP	4.87	□□□□□ -1.63
PDR12	YPL058C	SNU66	Q12420	587 aa	Predicted RBP	4.87	□□□□□ -1.63
PDR12	YPL058C	SIR4	P11978	1358 aa		4.87	□□□□□ -1.63
PDR12	YPL058C	IRE1	P32361	1115 aa		4.87	□□□□□ -1.63
PDR12	YPL058C	YNL035C	P53962	389 aa	Known RBP	4.87	□□□□□ -1.63
PDR12	YPL058C	ICL1	P28240	557 aa	Predicted RBP	4.87	□□□□□ -1.63
PDR12	YPL058C	PHM7	Q12252	991 aa		4.87	□□□□□ -1.63
PDR12	YPL058C	SDH5	Q08230	162 aa		4.86	□□□□□ -1.63
PDR12	YPL058C	YIL089W	P40500	205 aa		4.86	□□□□□ -1.63
PDR12	YPL058C	MPP10	P47083	593 aa	Known RBP	4.86	□□□□□ -1.63
PDR12	YPL058C	YJR107W	P47145	328 aa		4.86	□□□□□ -1.63
PDR12	YPL058C	APL2	P36000	726 aa	Predicted RBP	4.85	□□□□□ -1.63
PDR12	YPL058C	SEC3	P33332	1336 aa	Known RBP	4.85	□□□□□ -1.63
PDR12	YPL058C	STS1	P38637	319 aa		4.85	□□□□□ -1.63
PDR12	YPL058C	PRP43	P53131	767 aa	Known RBP	4.85	□□□□□ -1.63
PDR12	YPL058C	YLR225C	Q05948	407 aa	Known RBP	4.85	□□□□□ -1.63
PDR12	YPL058C	TY1B-BR	Q12193	1756 aa		4.85	□□□□□ -1.63
PDR12	YPL058C	TY1B-GR3	Q12316	1755 aa		4.85	□□□□□ -1.63
PDR12	YPL058C	TY1B-OR	Q92393	1755 aa		4.85	□□□□□ -1.63
PDR12	YPL058C	HEM1	P09950	548 aa	Predicted RBP	4.85	□□□□□ -1.63
PDR12	YPL058C	SRS2	P12954	1174 aa		4.85	□□□□□ -1.63
PDR12	YPL058C	NUG1	P40010	520 aa	Known RBP	4.85	□□□□□ -1.63
PDR12	YPL058C	BRE1	Q07457	700 aa	Known RBP	4.85	□□□□□ -1.63
PDR12	YPL058C	SYF1	Q04048	859 aa	Predicted RBP	4.85	□□□□□ -1.63
PDR12	YPL058C	ICL2	Q12031	575 aa		4.85	□□□□□ -1.63
PDR12	YPL058C	HSP104	P31539	908 aa	Known RBP	4.84	□□□□□ -1.63
PDR12	YPL058C	GUA1	P38625	525 aa	Known RBP	4.84	□□□□□ -1.63
PDR12	YPL058C	CSR2	Q12734	1121 aa		4.84	□□□□□ -1.63
PDR12	YPL058C	ESF1	Q06344	628 aa	Known RBP	4.84	□□□□□ -1.63
PDR12	YPL058C	YBT1	P32386	1661 aa		4.84	□□□□□ -1.64
PDR12	YPL058C	KGD2	P19262	463 aa	Predicted RBP	4.84	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms