RNA–Protein interactions for RNA: YPL058C

PDR12, Transcript of Plasma membrane ATP-binding cassette (ABC) transporter, yeastyeast

Gene PDR12, Length 4,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDR12YPL058C MTC1P47018 478 aaKnown RBP7.49□□□□□ -1.21
PDR12YPL058C INO80P53115 1489 aa7.41□□□□□ -1.22
PDR12YPL058C RSE1Q04693 1361 aaKnown RBP7.32□□□□□ -1.24
PDR12YPL058C MIF2P35201 549 aa6.81□□□□□ -1.32
PDR12YPL058C KOG1P38873 1557 aa6.77□□□□□ -1.33
PDR12YPL058C MON2P48563 1636 aaPredicted RBP6.7□□□□□ -1.34
PDR12YPL058C SPA2P23201 1466 aaKnown RBP6.7□□□□□ -1.34
PDR12YPL058C TCB3Q03640 1545 aaKnown RBP6.62□□□□□ -1.35
PDR12YPL058C DNA2P38859 1522 aa6.62□□□□□ -1.35
PDR12YPL058C RQC2Q12532 1038 aaKnown RBP6.56□□□□□ -1.36
PDR12YPL058C ABP1P15891 592 aaKnown RBP6.55□□□□□ -1.36
PDR12YPL058C SWR1Q05471 1514 aa6.43□□□□□ -1.38
PDR12YPL058C YFR006WP43590 535 aa6.36□□□□□ -1.39
PDR12YPL058C SGS1P35187 1447 aa6.35□□□□□ -1.39
PDR12YPL058C ECM5Q03214 1411 aa6.33□□□□□ -1.4
PDR12YPL058C BUD4P47136 1447 aa6.31□□□□□ -1.4
PDR12YPL058C TAF2P23255 1407 aa6.27□□□□□ -1.41
PDR12YPL058C URN1Q06525 465 aaKnown RBP6.24□□□□□ -1.41
PDR12YPL058C SPT6P23615 1451 aaKnown RBP6.24□□□□□ -1.41
PDR12YPL058C DRS1P32892 752 aaKnown RBP6.24□□□□□ -1.41
PDR12YPL058C RTT106P40161 455 aa6.17□□□□□ -1.42
PDR12YPL058C SKI3P17883 1432 aaKnown RBP6.16□□□□□ -1.42
PDR12YPL058C LTE1P07866 1435 aa6.15□□□□□ -1.42
PDR12YPL058C DRS2P39524 1355 aa6.15□□□□□ -1.43
PDR12YPL058C TAF7Q05021 590 aa6.12□□□□□ -1.43
PDR12YPL058C YTA7P40340 1379 aa6.12□□□□□ -1.43
PDR12YPL058C GEA2P39993 1459 aaKnown RBP6.12□□□□□ -1.43
PDR12YPL058C THO2P53552 1597 aaKnown RBP6.1□□□□□ -1.43
PDR12YPL058C REV3P14284 1504 aa6.07□□□□□ -1.44
PDR12YPL058C MMS1Q06211 1407 aa6.05□□□□□ -1.44
PDR12YPL058C BPT1P14772 1559 aa6.05□□□□□ -1.44
PDR12YPL058C MDS3P53094 1487 aa6.04□□□□□ -1.44
PDR12YPL058C PRI1P10363 409 aa6.01□□□□□ -1.45
PDR12YPL058C MET5P47169 1442 aa6.01□□□□□ -1.45
PDR12YPL058C TRM732Q03496 1420 aa6.01□□□□□ -1.45
PDR12YPL058C SCT1P32784 759 aa5.99□□□□□ -1.45
PDR12YPL058C NAP1P25293 417 aaKnown RBP5.98□□□□□ -1.45
PDR12YPL058C HSL1P34244 1518 aa5.96□□□□□ -1.46
PDR12YPL058C BNR1P40450 1375 aa5.95□□□□□ -1.46
PDR12YPL058C YMR196WQ04336 1088 aa5.93□□□□□ -1.46
PDR12YPL058C MET10P39692 1035 aa5.93□□□□□ -1.46
PDR12YPL058C XRN1P22147 1528 aaKnown RBP5.92□□□□□ -1.46
PDR12YPL058C STH1P32597 1359 aa5.91□□□□□ -1.46
PDR12YPL058C UBP1P25037 809 aa5.91□□□□□ -1.46
PDR12YPL058C YCF1P39109 1515 aaKnown RBP5.91□□□□□ -1.46
PDR12YPL058C TY1B-DR4Q07793 1604 aa5.9□□□□□ -1.46
PDR12YPL058C ITT1Q04638 464 aa5.89□□□□□ -1.47
PDR12YPL058C LEU3P08638 886 aa5.88□□□□□ -1.47
PDR12YPL058C NSR1P27476 414 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47not detected
PDR12YPL058C YJL181WP46987 611 aa5.85□□□□□ -1.47
PDR12YPL058C SSK2P53599 1579 aa5.82□□□□□ -1.48
PDR12YPL058C UFD4P33202 1483 aa5.82□□□□□ -1.48
PDR12YPL058C BFR2Q06631 534 aaKnown RBP5.81□□□□□ -1.48
PDR12YPL058C HIR3P47171 1648 aa5.8□□□□□ -1.48
PDR12YPL058C MRX12P47084 519 aa5.79□□□□□ -1.48
PDR12YPL058C TOP2P06786 1428 aaKnown RBP5.79□□□□□ -1.48
PDR12YPL058C DNF1P32660 1571 aa5.78□□□□□ -1.48
PDR12YPL058C SIN3P22579 1536 aa5.78□□□□□ -1.48
PDR12YPL058C YPK9Q12697 1472 aa5.77□□□□□ -1.49
PDR12YPL058C YAP3P38749 330 aa5.76□□□□□ -1.49
PDR12YPL058C ESC1Q03661 1658 aaKnown RBP5.76□□□□□ -1.49
PDR12YPL058C PAF1P38351 445 aa5.76□□□□□ -1.49
PDR12YPL058C CHD1P32657 1468 aa5.75□□□□□ -1.49
PDR12YPL058C PEP1P32319 1579 aa5.74□□□□□ -1.49
PDR12YPL058C TRM3Q07527 1436 aa5.74□□□□□ -1.49
PDR12YPL058C ENP1P38333 483 aaKnown RBP5.73□□□□□ -1.49
PDR12YPL058C SMC4Q12267 1418 aa5.72□□□□□ -1.49
PDR12YPL058C UGA2P38067 497 aa5.72□□□□□ -1.49
PDR12YPL058C MAK10Q02197 733 aa5.71□□□□□ -1.5
PDR12YPL058C SCC2Q04002 1493 aa5.7□□□□□ -1.5
PDR12YPL058C PAN1P32521 1480 aa5.69□□□□□ -1.5
PDR12YPL058C CKB1P43639 278 aa5.68□□□□□ -1.5
PDR12YPL058C VPS15P22219 1454 aa5.68□□□□□ -1.5
PDR12YPL058C MYO2P19524 1574 aaKnown RBP5.68□□□□□ -1.5
PDR12YPL058C SAS10Q12136 610 aaPredicted RBP5.67□□□□□ -1.5
PDR12YPL058C NUP159P40477 1460 aa5.67□□□□□ -1.5
PDR12YPL058C MMS22Q06164 1454 aa5.67□□□□□ -1.5
PDR12YPL058C IFH1P39520 1085 aa5.67□□□□□ -1.5
PDR12YPL058C RRT14P40470 206 aa5.67□□□□□ -1.5
PDR12YPL058C PRP40P33203 583 aaKnown RBP5.66□□□□□ -1.5
PDR12YPL058C RKR1Q04781 1562 aa5.63□□□□□ -1.51
PDR12YPL058C BUD21Q08492 214 aaPredicted RBP5.63□□□□□ -1.51
PDR12YPL058C RPA190P10964 1664 aaKnown RBP5.62□□□□□ -1.51
PDR12YPL058C YAH1Q12184 172 aaKnown RBP5.61□□□□□ -1.51
PDR12YPL058C ALD2P47771 506 aa5.6□□□□□ -1.51
PDR12YPL058C LAM6Q08001 693 aa5.6□□□□□ -1.51
PDR12YPL058C CDC25P04821 1589 aa5.6□□□□□ -1.51
PDR12YPL058C SPP41P38904 1435 aa5.6□□□□□ -1.51
PDR12YPL058C NUP170P38181 1502 aa5.59□□□□□ -1.51
PDR12YPL058C EDE1P34216 1381 aa5.59□□□□□ -1.51
PDR12YPL058C SSN2P38931 1420 aa5.58□□□□□ -1.52
PDR12YPL058C BUD3P25558 1636 aa5.58□□□□□ -1.52
PDR12YPL058C GTT3P39996 337 aa5.58□□□□□ -1.52
PDR12YPL058C STU1P38198 1513 aa5.57□□□□□ -1.52
PDR12YPL058C ENV9Q08651 330 aa5.57□□□□□ -1.52
PDR12YPL058C NUP157P40064 1391 aaKnown RBP5.57□□□□□ -1.52
PDR12YPL058C SPT7P35177 1332 aa5.56□□□□□ -1.52
PDR12YPL058C YIL055CP40523 627 aaKnown RBP5.56□□□□□ -1.52
PDR12YPL058C RPO31P04051 1460 aa5.56□□□□□ -1.52
PDR12YPL058C TAF5P38129 798 aa5.55□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms