RNA–Protein interactions for RNA: YMR308C

PSE1, Transcript of Karyopherin/importin that interacts with the nuclear pore complex, yeastyeast

Gene PSE1, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSE1YMR308C YOL057WQ08225 711 aa5.75□□□□□ -1.49
PSE1YMR308C BMS1Q08965 1183 aaKnown RBP5.74□□□□□ -1.49
PSE1YMR308C UGA3P26370 528 aa5.74□□□□□ -1.49
PSE1YMR308C BDP1P46678 594 aa5.74□□□□□ -1.49
PSE1YMR308C MDM1Q01846 1127 aa5.74□□□□□ -1.49
PSE1YMR308C UTP4Q06679 776 aaKnown RBP5.74□□□□□ -1.49
PSE1YMR308C YVC1Q12324 675 aa5.74□□□□□ -1.49
PSE1YMR308C ESF2P53743 316 aaKnown RBP5.73□□□□□ -1.49
PSE1YMR308C CDC31P06704 161 aaKnown RBP5.73□□□□□ -1.49
PSE1YMR308C MSM1P22438 575 aa5.73□□□□□ -1.49
PSE1YMR308C VHR2P40041 505 aa5.73□□□□□ -1.49
PSE1YMR308C RIA1P53893 1110 aa5.73□□□□□ -1.49
PSE1YMR308C TFB4Q12004 338 aa5.73□□□□□ -1.49
PSE1YMR308C WHI5Q12416 295 aa5.73□□□□□ -1.49
PSE1YMR308C SPT5P27692 1063 aaKnown RBP5.73□□□□□ -1.49
PSE1YMR308C ARC19P33204 171 aaKnown RBP5.73□□□□□ -1.49
PSE1YMR308C IES1P43579 692 aa5.73□□□□□ -1.49
PSE1YMR308C SMC3P47037 1230 aa5.73□□□□□ -1.49
PSE1YMR308C PUS1Q12211 544 aaKnown RBP5.73□□□□□ -1.49
PSE1YMR308C APC2Q12440 853 aa5.73□□□□□ -1.49
PSE1YMR308C APL6P46682 809 aa5.72□□□□□ -1.49
PSE1YMR308C MSH6Q03834 1242 aa5.72□□□□□ -1.49
PSE1YMR308C SPO71Q03868 1245 aa5.72□□□□□ -1.49
PSE1YMR308C ENT2Q05785 613 aa5.72□□□□□ -1.49
PSE1YMR308C SGS1P35187 1447 aa5.72□□□□□ -1.49
PSE1YMR308C CLB5P30283 435 aa5.72□□□□□ -1.49
PSE1YMR308C HUL5P53119 910 aa5.72□□□□□ -1.49
PSE1YMR308C SRP1Q02821 542 aaKnown RBP5.72□□□□□ -1.49
PSE1YMR308C PHM6Q05637 104 aa5.72□□□□□ -1.49
PSE1YMR308C CYB2P00175 591 aa5.71□□□□□ -1.5
PSE1YMR308C SIT4P20604 311 aa5.71□□□□□ -1.5
PSE1YMR308C PUP2P32379 260 aa5.71□□□□□ -1.5
PSE1YMR308C ACP1P32463 125 aa5.71□□□□□ -1.5
PSE1YMR308C KDX1P36005 433 aa5.71□□□□□ -1.5
PSE1YMR308C LSP1Q12230 341 aaKnown RBP5.71□□□□□ -1.5
PSE1YMR308C BRF1P29056 596 aa5.71□□□□□ -1.5
PSE1YMR308C NOP14Q99207 810 aaKnown RBP5.71□□□□□ -1.5
PSE1YMR308C YEF3P16521 1044 aaKnown RBP5.7□□□□□ -1.5
PSE1YMR308C MAM1P40065 302 aa5.7□□□□□ -1.5
PSE1YMR308C CST6P40535 587 aa5.7□□□□□ -1.5
PSE1YMR308C IRC3Q06683 689 aa5.7□□□□□ -1.5
PSE1YMR308C SUB2Q07478 446 aaKnown RBP5.7□□□□□ -1.5
PSE1YMR308C RTG2P32608 588 aaKnown RBP5.7□□□□□ -1.5
PSE1YMR308C ATG19P35193 415 aa5.7□□□□□ -1.5
PSE1YMR308C PAF1P38351 445 aa5.7□□□□□ -1.5
PSE1YMR308C ARR1Q06596 294 aa5.7□□□□□ -1.5
PSE1YMR308C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
PSE1YMR308C MAK16P10962 306 aaPredicted RBP5.7□□□□□ -1.5
PSE1YMR308C TSR4P25040 408 aa5.7□□□□□ -1.5
PSE1YMR308C EFM2P38347 419 aa5.7□□□□□ -1.5
PSE1YMR308C BEM4P39011 633 aa5.7□□□□□ -1.5
PSE1YMR308C YGL081WP53156 320 aa5.7□□□□□ -1.5
PSE1YMR308C JJJ1P53863 590 aa5.7□□□□□ -1.5
PSE1YMR308C ATG26Q06321 1198 aa5.7□□□□□ -1.5
PSE1YMR308C NDL1Q06568 189 aa5.7□□□□□ -1.5
PSE1YMR308C NKP1Q12493 238 aa5.7□□□□□ -1.5
PSE1YMR308C TRS33Q99394 268 aa5.7□□□□□ -1.5
PSE1YMR308C SAC3P46674 1301 aa5.69□□□□□ -1.5
PSE1YMR308C KEX2P13134 814 aa5.69□□□□□ -1.5
PSE1YMR308C VTI1Q04338 217 aa5.69□□□□□ -1.5
PSE1YMR308C KEX1P09620 729 aa5.69□□□□□ -1.5
PSE1YMR308C VMA1P17255 1071 aaKnown RBP5.69□□□□□ -1.5
PSE1YMR308C ARB1P40024 610 aaKnown RBP5.69□□□□□ -1.5
PSE1YMR308C CLP1Q08685 445 aaPredicted RBP5.69□□□□□ -1.5
PSE1YMR308C CCM1P48237 864 aaPredicted RBP5.68□□□□□ -1.5
PSE1YMR308C HST2P53686 357 aa5.68□□□□□ -1.5
PSE1YMR308C PCL8Q08966 492 aa5.68□□□□□ -1.5
PSE1YMR308C PET123P17558 318 aa5.68□□□□□ -1.5
PSE1YMR308C SWI3P32591 825 aa5.68□□□□□ -1.5
PSE1YMR308C PEP12P32854 288 aa5.68□□□□□ -1.5
PSE1YMR308C MET1P36150 593 aa5.68□□□□□ -1.5
PSE1YMR308C YNL247WP53852 767 aaKnown RBP5.68□□□□□ -1.5
PSE1YMR308C YML119WQ03208 357 aa5.68□□□□□ -1.5
PSE1YMR308C NSE3Q05541 303 aa5.68□□□□□ -1.5
PSE1YMR308C RNH70P53331 553 aa5.68□□□□□ -1.5
PSE1YMR308C RKM4Q12504 494 aa5.68□□□□□ -1.5
PSE1YMR308C MED8P38304 223 aa5.67□□□□□ -1.5
PSE1YMR308C SIT1P39980 628 aa5.67□□□□□ -1.5
PSE1YMR308C DSL1P53847 754 aa5.67□□□□□ -1.5
PSE1YMR308C COG8Q04632 607 aa5.67□□□□□ -1.5
PSE1YMR308C ORM2Q06144 216 aa5.67□□□□□ -1.5
PSE1YMR308C TTI1P36097 1038 aa5.67□□□□□ -1.5
PSE1YMR308C SEN54Q02825 467 aaPredicted RBP5.67□□□□□ -1.5
PSE1YMR308C HEH2Q03281 663 aa5.67□□□□□ -1.5
PSE1YMR308C KEL2P50090 882 aa5.66□□□□□ -1.5
PSE1YMR308C SRP54P20424 541 aaKnown RBP5.66□□□□□ -1.5
PSE1YMR308C REB1P21538 810 aa5.66□□□□□ -1.5
PSE1YMR308C UBP13P38187 747 aa5.66□□□□□ -1.5
PSE1YMR308C PEX21P50091 288 aa5.66□□□□□ -1.5
PSE1YMR308C ITC1P53125 1264 aa5.66□□□□□ -1.5
PSE1YMR308C YDR338CQ05497 695 aa5.66□□□□□ -1.5
PSE1YMR308C ARV1Q06541 321 aa5.66□□□□□ -1.5
PSE1YMR308C PMT7Q06644 662 aa5.66□□□□□ -1.5
PSE1YMR308C MPC54Q08550 464 aa5.66□□□□□ -1.5
PSE1YMR308C TPM1P17536 199 aaKnown RBP5.66□□□□□ -1.5
PSE1YMR308C PSO2P30620 661 aa5.66□□□□□ -1.5
PSE1YMR308C FUI1P38196 639 aa5.66□□□□□ -1.5
PSE1YMR308C VPS20Q04272 221 aa5.66□□□□□ -1.5
PSE1YMR308C PUF6Q04373 656 aaKnown RBP5.66□□□□□ -1.5
PSE1YMR308C SLP1Q12232 587 aa5.66□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms