RNA–Protein interactions for RNA: YMR308C

PSE1, Transcript of Karyopherin/importin that interacts with the nuclear pore complex, yeastyeast

Gene PSE1, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSE1YMR308C RQC2Q12532 1038 aaKnown RBP8.73□□□□□ -1.01
PSE1YMR308C BFR2Q06631 534 aaKnown RBP8.19□□□□□ -1.1
PSE1YMR308C TAF7Q05021 590 aa7.98□□□□□ -1.13
PSE1YMR308C TFA1P36100 482 aa7.69□□□□□ -1.18
PSE1YMR308C URN1Q06525 465 aaKnown RBP7.67□□□□□ -1.18
PSE1YMR308C DRS1P32892 752 aaKnown RBP7.57□□□□□ -1.2
PSE1YMR308C SIS2P36024 562 aa7.25□□□□□ -1.25
PSE1YMR308C MTC1P47018 478 aaKnown RBP7.21□□□□□ -1.25
PSE1YMR308C EBP2P36049 427 aaKnown RBP7.14□□□□□ -1.27
PSE1YMR308C YFR016CP43597 1233 aaKnown RBP7.14□□□□□ -1.27
PSE1YMR308C AVT3P36062 692 aa7.13□□□□□ -1.27
PSE1YMR308C IOC4Q04213 475 aa7.09□□□□□ -1.27
PSE1YMR308C CAB3P36076 571 aa7.07□□□□□ -1.28
PSE1YMR308C NAP1P25293 417 aaKnown RBP7.04□□□□□ -1.28
PSE1YMR308C DIP2Q12220 943 aaPredicted RBP6.97□□□□□ -1.29
PSE1YMR308C KRI1P42846 591 aaKnown RBP6.97□□□□□ -1.29
PSE1YMR308C YRB30P53107 440 aaPredicted RBP6.96□□□□□ -1.3
PSE1YMR308C LEO1P38439 464 aa6.95□□□□□ -1.3
PSE1YMR308C RPS0BP46654 252 aaKnown RBP6.89□□□□□ -1.31
PSE1YMR308C NOP2P40991 618 aaKnown RBP6.88□□□□□ -1.31
PSE1YMR308C DMA1P38823 416 aa6.85□□□□□ -1.31
PSE1YMR308C IFH1P39520 1085 aa6.81□□□□□ -1.32
PSE1YMR308C CWC22P53333 577 aaKnown RBP6.79□□□□□ -1.32
PSE1YMR308C ORC1P54784 914 aaPredicted RBP6.75□□□□□ -1.33
PSE1YMR308C SNU71P53207 620 aaKnown RBP6.7□□□□□ -1.34
PSE1YMR308C AIM44Q99299 758 aa6.67□□□□□ -1.34
PSE1YMR308C YPR148CQ06523 435 aa6.64□□□□□ -1.35
PSE1YMR308C PSH1Q12161 406 aa6.64□□□□□ -1.35
PSE1YMR308C TOP1P04786 769 aa6.63□□□□□ -1.35
PSE1YMR308C RLP24Q07915 199 aaKnown RBP6.62□□□□□ -1.35
PSE1YMR308C MNN4P36044 1178 aa6.61□□□□□ -1.35
PSE1YMR308C MDG1P53885 366 aa6.59□□□□□ -1.35
PSE1YMR308C ABP1P15891 592 aaKnown RBP6.56□□□□□ -1.36
PSE1YMR308C DEF1P35732 738 aaKnown RBP6.56□□□□□ -1.36
PSE1YMR308C ENV11P53246 860 aa6.54□□□□□ -1.36
PSE1YMR308C SWE1P32944 819 aa6.48□□□□□ -1.37
PSE1YMR308C RSE1Q04693 1361 aaKnown RBP6.44□□□□□ -1.38
PSE1YMR308C NSR1P27476 414 aaKnown RBP RIP-Chip data6.44□□□□□ -1.38not detected
PSE1YMR308C GIN4Q12263 1142 aa6.43□□□□□ -1.38
PSE1YMR308C ATG36P46983 293 aa6.43□□□□□ -1.38
PSE1YMR308C TOA1P32773 286 aa6.39□□□□□ -1.39
PSE1YMR308C NUG1P40010 520 aaKnown RBP6.38□□□□□ -1.39
PSE1YMR308C HIF1Q12373 385 aa6.38□□□□□ -1.39
PSE1YMR308C DMA2P53924 522 aa6.38□□□□□ -1.39
PSE1YMR308C TIF4632P39936 914 aaKnown RBP6.38□□□□□ -1.39
PSE1YMR308C SUB1P54000 292 aaKnown RBP6.38□□□□□ -1.39
PSE1YMR308C TPO2P53283 614 aa6.37□□□□□ -1.39
PSE1YMR308C SPT2P06843 333 aaPredicted RBP6.37□□□□□ -1.39
PSE1YMR308C RPN1P38764 993 aaKnown RBP6.37□□□□□ -1.39
PSE1YMR308C SSA1P10591 642 aaKnown RBP6.36□□□□□ -1.39
PSE1YMR308C SSA2P10592 639 aaKnown RBP6.36□□□□□ -1.39
PSE1YMR308C SPT7P35177 1332 aa6.35□□□□□ -1.39
PSE1YMR308C LEU3P08638 886 aa6.34□□□□□ -1.39
PSE1YMR308C BRL1P38770 471 aa6.33□□□□□ -1.4
PSE1YMR308C NHA1Q99271 985 aa6.33□□□□□ -1.4
PSE1YMR308C ISW1P38144 1129 aa6.32□□□□□ -1.4
PSE1YMR308C GRX3Q03835 250 aa6.31□□□□□ -1.4
PSE1YMR308C LAM6Q08001 693 aa6.3□□□□□ -1.4
PSE1YMR308C RPS0AP32905 252 aaKnown RBP6.28□□□□□ -1.4
PSE1YMR308C SPT21P35209 758 aa6.27□□□□□ -1.41
PSE1YMR308C NOP53Q12080 455 aaKnown RBP6.27□□□□□ -1.41
PSE1YMR308C RLF2Q12495 606 aa6.27□□□□□ -1.41
PSE1YMR308C TLG1Q03322 224 aa6.27□□□□□ -1.41
PSE1YMR308C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.26□□□□□ -1.41 RIP-Chip
PSE1YMR308C TCB2P48231 1178 aa6.26□□□□□ -1.41
PSE1YMR308C QCR6P00127 147 aa6.26□□□□□ -1.41
PSE1YMR308C DAL5P15365 543 aa6.24□□□□□ -1.41
PSE1YMR308C HSP82P02829 709 aaKnown RBP6.24□□□□□ -1.41
PSE1YMR308C BRN1P38170 754 aa6.24□□□□□ -1.41
PSE1YMR308C FAP1P53971 965 aa6.24□□□□□ -1.41
PSE1YMR308C SPT16P32558 1035 aaKnown RBP6.22□□□□□ -1.41
PSE1YMR308C VPS72Q03388 795 aa6.22□□□□□ -1.41
PSE1YMR308C PLP2Q12017 286 aa6.22□□□□□ -1.41
PSE1YMR308C ENP1P38333 483 aaKnown RBP6.21□□□□□ -1.41
PSE1YMR308C FPR4Q06205 392 aaPredicted RBP6.21□□□□□ -1.42
PSE1YMR308C RNA1P11745 407 aaKnown RBP6.2□□□□□ -1.42
PSE1YMR308C FPR3P38911 411 aaKnown RBP6.2□□□□□ -1.42
PSE1YMR308C TAF13P11747 167 aa6.19□□□□□ -1.42
PSE1YMR308C MPP10P47083 593 aaKnown RBP6.19□□□□□ -1.42
PSE1YMR308C ASF1P32447 279 aa6.18□□□□□ -1.42
PSE1YMR308C YGR130CP53278 816 aa6.18□□□□□ -1.42
PSE1YMR308C YNL011CP53980 444 aa6.17□□□□□ -1.42
PSE1YMR308C BUD21Q08492 214 aaPredicted RBP6.17□□□□□ -1.42
PSE1YMR308C SSP1P38871 571 aa6.17□□□□□ -1.42
PSE1YMR308C FUN12P39730 1002 aaKnown RBP6.17□□□□□ -1.42
PSE1YMR308C OSW7P43611 510 aa6.16□□□□□ -1.42
PSE1YMR308C MCM1P11746 286 aa6.16□□□□□ -1.42
PSE1YMR308C FAR11P53917 953 aa6.16□□□□□ -1.42
PSE1YMR308C NOP8Q08287 484 aaPredicted RBP6.15□□□□□ -1.43
PSE1YMR308C KIP3P53086 805 aaKnown RBP6.14□□□□□ -1.43
PSE1YMR308C RTS3P53289 263 aa6.14□□□□□ -1.43
PSE1YMR308C YML020WQ03722 664 aa6.14□□□□□ -1.43
PSE1YMR308C ETT1Q08421 412 aaKnown RBP6.12□□□□□ -1.43
PSE1YMR308C SEC9P40357 651 aa6.11□□□□□ -1.43
PSE1YMR308C YJR008WP47085 338 aa6.11□□□□□ -1.43
PSE1YMR308C PIL1P53252 339 aaKnown RBP6.11□□□□□ -1.43
PSE1YMR308C PDR1P12383 1068 aa6.11□□□□□ -1.43
PSE1YMR308C ZDS1P50111 915 aaKnown RBP6.11□□□□□ -1.43
PSE1YMR308C SAS10Q12136 610 aaPredicted RBP6.11□□□□□ -1.43
PSE1YMR308C SPC110P32380 944 aa6.1□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms