RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeastyeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PWP1YLR196W DEP1P31385 405 aa6.17□□□□□ -1.42
PWP1YLR196W DOP1Q03921 1698 aa6.17□□□□□ -1.42
PWP1YLR196W TY3B-IQ7LHG5 1498 aaKnown RBP6.17□□□□□ -1.42
PWP1YLR196W HOP09932 586 aa6.16□□□□□ -1.42
PWP1YLR196W RPC82P32349 654 aa6.16□□□□□ -1.42
PWP1YLR196W PIM1P36775 1133 aa6.16□□□□□ -1.42
PWP1YLR196W GEF1P37020 779 aa6.16□□□□□ -1.42
PWP1YLR196W TY4A-JP47023 414 aa6.16□□□□□ -1.42
PWP1YLR196W ZDS1P50111 915 aaKnown RBP6.16□□□□□ -1.42
PWP1YLR196W EAF7P53911 425 aaKnown RBP6.16□□□□□ -1.42
PWP1YLR196W YVC1Q12324 675 aa6.16□□□□□ -1.42
PWP1YLR196W SRP54P20424 541 aaKnown RBP6.16□□□□□ -1.42
PWP1YLR196W ERV41Q04651 352 aa6.16□□□□□ -1.42
PWP1YLR196W CLF1Q12309 687 aaPredicted RBP6.16□□□□□ -1.42
PWP1YLR196W NUP157P40064 1391 aaKnown RBP6.15□□□□□ -1.42
PWP1YLR196W YSP2Q06681 1438 aa6.15□□□□□ -1.42
PWP1YLR196W PDR1P12383 1068 aa6.15□□□□□ -1.42
PWP1YLR196W MEH1Q02205 184 aa6.15□□□□□ -1.42
PWP1YLR196W PKH1Q03407 766 aa6.15□□□□□ -1.42
PWP1YLR196W GGA1Q06336 557 aa6.15□□□□□ -1.42
PWP1YLR196W PSK2Q08217 1101 aa6.15□□□□□ -1.42
PWP1YLR196W TY4B-PA0A0B7P3V8 1104 aa6.14□□□□□ -1.43
PWP1YLR196W CLN1P20437 546 aa6.14□□□□□ -1.43
PWP1YLR196W NPR3P38742 1146 aa6.14□□□□□ -1.43
PWP1YLR196W YMR124WP39523 943 aaKnown RBP6.14□□□□□ -1.43
PWP1YLR196W SNF7P39929 240 aaKnown RBP6.14□□□□□ -1.43
PWP1YLR196W IMH1Q06704 911 aaKnown RBP6.14□□□□□ -1.43
PWP1YLR196W NFI1Q12216 726 aa6.14□□□□□ -1.43
PWP1YLR196W NOP56Q12460 504 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
PWP1YLR196W LTE1P07866 1435 aa6.14□□□□□ -1.43
PWP1YLR196W MMS1Q06211 1407 aa6.14□□□□□ -1.43
PWP1YLR196W VPS5Q92331 675 aa6.13□□□□□ -1.43
PWP1YLR196W BRE1Q07457 700 aaKnown RBP6.13□□□□□ -1.43
PWP1YLR196W NOP58Q12499 511 aaKnown RBP6.13□□□□□ -1.43
PWP1YLR196W SSF1P38789 453 aaPredicted RBP6.12□□□□□ -1.43
PWP1YLR196W DSN1P40568 576 aa6.12□□□□□ -1.43
PWP1YLR196W BMS1Q08965 1183 aaKnown RBP6.12□□□□□ -1.43
PWP1YLR196W MLP1Q02455 1875 aaKnown RBP6.12□□□□□ -1.43
PWP1YLR196W RAD2P07276 1031 aa6.11□□□□□ -1.43
PWP1YLR196W SSA4P22202 642 aaKnown RBP6.11□□□□□ -1.43
PWP1YLR196W TAF1P46677 1066 aa6.11□□□□□ -1.43
PWP1YLR196W FAR11P53917 953 aa6.11□□□□□ -1.43
PWP1YLR196W YML020WQ03722 664 aa6.11□□□□□ -1.43
PWP1YLR196W YOR389WQ08912 624 aa6.11□□□□□ -1.43
PWP1YLR196W SEC7P11075 2009 aaKnown RBP6.11□□□□□ -1.43
PWP1YLR196W RPL5P26321 297 aaKnown RBP6.11□□□□□ -1.43
PWP1YLR196W PDS5Q04264 1277 aa6.11□□□□□ -1.43
PWP1YLR196W HEL2Q05580 639 aaKnown RBP6.11□□□□□ -1.43
PWP1YLR196W PSR1Q07800 427 aa6.11□□□□□ -1.43
PWP1YLR196W VMR1P38735 1592 aa6.1□□□□□ -1.43
PWP1YLR196W NUP192P47054 1683 aa6.1□□□□□ -1.43
PWP1YLR196W OXP1P28273 1286 aa6.1□□□□□ -1.43
PWP1YLR196W TPS3P38426 1054 aaKnown RBP6.1□□□□□ -1.43
PWP1YLR196W SEC27P41811 889 aaKnown RBP6.1□□□□□ -1.43
PWP1YLR196W GDE1Q02979 1223 aa6.1□□□□□ -1.43
PWP1YLR196W CEF1Q03654 590 aaPredicted RBP6.1□□□□□ -1.43
PWP1YLR196W DCD1P06773 312 aa6.09□□□□□ -1.43
PWP1YLR196W GAL11P19659 1081 aa6.09□□□□□ -1.43
PWP1YLR196W YIL055CP40523 627 aaKnown RBP6.09□□□□□ -1.43
PWP1YLR196W SYH1Q02875 849 aaKnown RBP6.09□□□□□ -1.43
PWP1YLR196W YPR172WQ06608 200 aa6.09□□□□□ -1.43
PWP1YLR196W PDR11P40550 1411 aa6.08□□□□□ -1.44
PWP1YLR196W DNF2Q12675 1612 aa6.08□□□□□ -1.44
PWP1YLR196W MED8P38304 223 aa6.08□□□□□ -1.44
PWP1YLR196W CHZ1P40019 153 aaPredicted RBP6.08□□□□□ -1.44
PWP1YLR196W SWI3P32591 825 aa6.08□□□□□ -1.44
PWP1YLR196W MET10P39692 1035 aa6.08□□□□□ -1.44
PWP1YLR196W GIR2Q03768 265 aaPredicted RBP6.08□□□□□ -1.44
PWP1YLR196W TAF5P38129 798 aa6.07□□□□□ -1.44
PWP1YLR196W UBP10P53874 792 aaPredicted RBP6.07□□□□□ -1.44
PWP1YLR196W ORM2Q06144 216 aa6.07□□□□□ -1.44
PWP1YLR196W YLR257WQ06146 321 aaKnown RBP6.07□□□□□ -1.44
PWP1YLR196W LSP1Q12230 341 aaKnown RBP6.07□□□□□ -1.44
PWP1YLR196W RAV1P47104 1357 aa6.07□□□□□ -1.44
PWP1YLR196W TFG1P41895 735 aaPredicted RBP6.06□□□□□ -1.44
PWP1YLR196W PAP2P53632 584 aaKnown RBP6.06□□□□□ -1.44
PWP1YLR196W NDL1Q06568 189 aa6.06□□□□□ -1.44
PWP1YLR196W RIX7Q07844 837 aaKnown RBP6.06□□□□□ -1.44
PWP1YLR196W RPC31P17890 251 aa6.05□□□□□ -1.44
PWP1YLR196W MPE1P35728 441 aaKnown RBP6.05□□□□□ -1.44
PWP1YLR196W ECM1P39715 212 aa6.05□□□□□ -1.44
PWP1YLR196W PHO87P25360 923 aa6.05□□□□□ -1.44
PWP1YLR196W NMD3P38861 518 aaKnown RBP6.05□□□□□ -1.44
PWP1YLR196W CCM1P48237 864 aaPredicted RBP6.05□□□□□ -1.44
PWP1YLR196W VTC3Q02725 835 aa6.05□□□□□ -1.44
PWP1YLR196W RRB1Q04225 511 aaKnown RBP6.05□□□□□ -1.44
PWP1YLR196W GLE1Q12315 538 aa6.05□□□□□ -1.44
PWP1YLR196W NUP188P52593 1655 aaKnown RBP6.04□□□□□ -1.44
PWP1YLR196W RPA135P22138 1203 aaKnown RBP6.04□□□□□ -1.44
PWP1YLR196W ROX1P25042 368 aa6.04□□□□□ -1.44
PWP1YLR196W CLB5P30283 435 aa6.04□□□□□ -1.44
PWP1YLR196W SPC42P36094 363 aa6.04□□□□□ -1.44
PWP1YLR196W PTP3P40048 928 aa6.04□□□□□ -1.44
PWP1YLR196W RTC1Q08281 1341 aa6.04□□□□□ -1.44
PWP1YLR196W IML1P47170 1584 aa6.04□□□□□ -1.44
PWP1YLR196W SNF2P22082 1703 aa6.04□□□□□ -1.44
PWP1YLR196W MSM1P22438 575 aa6.03□□□□□ -1.44
PWP1YLR196W DRS2P39524 1355 aa6.03□□□□□ -1.44
PWP1YLR196W IES2P40154 320 aa6.03□□□□□ -1.44
PWP1YLR196W BNR1P40450 1375 aa6.03□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms