RNA–Protein interactions for RNA: YIL021W

RPB3, Transcript of RNA polymerase II third largest subunit B44, yeastyeast

Gene RPB3, Length 957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB3YIL021W CSN12P47130 423 aa5.74□□□□□ -1.49
RPB3YIL021W CHD1P32657 1468 aa5.73□□□□□ -1.49
RPB3YIL021W GCR2Q01722 534 aa5.73□□□□□ -1.49
RPB3YIL021W SYH1Q02875 849 aaKnown RBP5.72□□□□□ -1.49
RPB3YIL021W PKH3Q03306 898 aaPredicted RBP5.72□□□□□ -1.49
RPB3YIL021W KIN1P13185 1064 aa5.71□□□□□ -1.5
RPB3YIL021W RGA1P39083 1007 aa5.7□□□□□ -1.5
RPB3YIL021W BUD4P47136 1447 aa5.7□□□□□ -1.5
RPB3YIL021W MET22P32179 357 aa5.69□□□□□ -1.5
RPB3YIL021W MMS22Q06164 1454 aa5.69□□□□□ -1.5
RPB3YIL021W VAC17P25591 423 aa5.68□□□□□ -1.5
RPB3YIL021W MRT4P33201 236 aaKnown RBP5.68□□□□□ -1.5
RPB3YIL021W HST3P53687 447 aa5.68□□□□□ -1.5
RPB3YIL021W ATG2P53855 1592 aa5.67□□□□□ -1.5
RPB3YIL021W POL1P13382 1468 aa5.67□□□□□ -1.5
RPB3YIL021W ARG8P18544 423 aa5.67□□□□□ -1.5
RPB3YIL021W KIP2P28743 706 aa5.67□□□□□ -1.5
RPB3YIL021W IXR1P33417 597 aa5.67□□□□□ -1.5
RPB3YIL021W RPN1P38764 993 aaKnown RBP5.67□□□□□ -1.5
RPB3YIL021W YJR115WP47152 169 aa5.67□□□□□ -1.5
RPB3YIL021W RAD59Q12223 238 aa5.67□□□□□ -1.5
RPB3YIL021W YPK9Q12697 1472 aa5.65□□□□□ -1.5
RPB3YIL021W MSB3P48566 633 aaPredicted RBP5.65□□□□□ -1.5
RPB3YIL021W ENV9Q08651 330 aa5.65□□□□□ -1.5
RPB3YIL021W STU1P38198 1513 aa5.64□□□□□ -1.51
RPB3YIL021W GUA1P38625 525 aaKnown RBP5.64□□□□□ -1.51
RPB3YIL021W ITT1Q04638 464 aa5.64□□□□□ -1.51
RPB3YIL021W ECM5Q03214 1411 aa5.64□□□□□ -1.51
RPB3YIL021W FIG4P42837 879 aa5.63□□□□□ -1.51
RPB3YIL021W SSA2P10592 639 aaKnown RBP5.62□□□□□ -1.51
RPB3YIL021W GAR1P28007 205 aaKnown RBP5.62□□□□□ -1.51
RPB3YIL021W YPL062WQ02781 134 aa5.62□□□□□ -1.51
RPB3YIL021W YTA7P40340 1379 aa5.62□□□□□ -1.51
RPB3YIL021W YDR444WQ04093 687 aa5.61□□□□□ -1.51
RPB3YIL021W LCB5Q06147 687 aaKnown RBP5.61□□□□□ -1.51
RPB3YIL021W PTK2P47116 818 aaKnown RBP5.6□□□□□ -1.51
RPB3YIL021W YPR084WQ06821 456 aa5.6□□□□□ -1.51
RPB3YIL021W PEP1P32319 1579 aa5.59□□□□□ -1.51
RPB3YIL021W UGA3P26370 528 aa5.59□□□□□ -1.51
RPB3YIL021W YBL086CP38177 466 aa5.59□□□□□ -1.51
RPB3YIL021W EMW1P42842 904 aaKnown RBP5.59□□□□□ -1.51
RPB3YIL021W RKR1Q04781 1562 aa5.59□□□□□ -1.52
RPB3YIL021W MDS3P53094 1487 aa5.58□□□□□ -1.52
RPB3YIL021W SCC2Q04002 1493 aa5.58□□□□□ -1.52
RPB3YIL021W MAK16P10962 306 aaPredicted RBP5.58□□□□□ -1.52
RPB3YIL021W APP1P53933 587 aa5.58□□□□□ -1.52
RPB3YIL021W YDL176WQ12027 708 aa5.58□□□□□ -1.52
RPB3YIL021W BPT1P14772 1559 aa5.58□□□□□ -1.52
RPB3YIL021W YOR1P53049 1477 aa5.58□□□□□ -1.52
RPB3YIL021W RTT106P40161 455 aa5.57□□□□□ -1.52
RPB3YIL021W HPC2Q01448 625 aa5.56□□□□□ -1.52
RPB3YIL021W RPO31P04051 1460 aa5.56□□□□□ -1.52
RPB3YIL021W MYO4P32492 1471 aa5.56□□□□□ -1.52
RPB3YIL021W TEC1P18412 486 aa5.55□□□□□ -1.52
RPB3YIL021W NUP85P46673 744 aa5.54□□□□□ -1.52
RPB3YIL021W OPT2Q06593 877 aa5.54□□□□□ -1.52
RPB3YIL021W GBP2P25555 427 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
RPB3YIL021W NAF1P53919 492 aaKnown RBP5.53□□□□□ -1.52
RPB3YIL021W TOP2P06786 1428 aaKnown RBP5.53□□□□□ -1.52
RPB3YIL021W SMC4Q12267 1418 aa5.53□□□□□ -1.52
RPB3YIL021W CSE4P36012 229 aa5.52□□□□□ -1.53
RPB3YIL021W AAD14P42884 376 aa5.52□□□□□ -1.53
RPB3YIL021W SRF1Q12516 437 aa5.52□□□□□ -1.53
RPB3YIL021W PKC1P24583 1151 aa5.51□□□□□ -1.53
RPB3YIL021W TFB3Q03290 321 aa5.51□□□□□ -1.53
RPB3YIL021W YCF1P39109 1515 aaKnown RBP5.51□□□□□ -1.53
RPB3YIL021W UFD4P33202 1483 aa5.51□□□□□ -1.53
RPB3YIL021W GUT2P32191 649 aa5.5□□□□□ -1.53
RPB3YIL021W GLY1P37303 387 aaKnown RBP5.5□□□□□ -1.53
RPB3YIL021W ACO2P39533 789 aa5.5□□□□□ -1.53
RPB3YIL021W DFG5Q05031 458 aa5.5□□□□□ -1.53
RPB3YIL021W FRA1Q07825 749 aa5.5□□□□□ -1.53
RPB3YIL021W ARG82P07250 355 aa5.49□□□□□ -1.53
RPB3YIL021W MKS1P34072 584 aa5.49□□□□□ -1.53
RPB3YIL021W TY2B-LR1P0C2J3 1770 aa5.49□□□□□ -1.53
RPB3YIL021W TY2B-FP0CX63 1770 aa5.49□□□□□ -1.53
RPB3YIL021W TY2B-GR2P0CX64 1770 aa5.49□□□□□ -1.53
RPB3YIL021W TY2B-CP25384 1770 aa5.49□□□□□ -1.53
RPB3YIL021W TY2B-DR2Q03494 1770 aa5.49□□□□□ -1.53
RPB3YIL021W TY1B-DR1Q03855 1755 aa5.49□□□□□ -1.53
RPB3YIL021W TY2B-DR3Q07791 1770 aaKnown RBP5.49□□□□□ -1.53
RPB3YIL021W TY2B-OR1Q12113 1770 aa5.49□□□□□ -1.53
RPB3YIL021W TY2B-DR1Q12472 1770 aa5.49□□□□□ -1.53
RPB3YIL021W TY2B-OR2Q12501 1770 aa5.49□□□□□ -1.53
RPB3YIL021W TY1B-DR3Q99231 1755 aa5.48□□□□□ -1.53
RPB3YIL021W STE6P12866 1290 aa5.48□□□□□ -1.53
RPB3YIL021W FBP26P32604 452 aa5.48□□□□□ -1.53
RPB3YIL021W YLR346CQ06139 101 aa5.48□□□□□ -1.53
RPB3YIL021W TY1A-BLQ12266 440 aa5.48□□□□□ -1.53
RPB3YIL021W SNQ2P32568 1501 aaKnown RBP5.48□□□□□ -1.53
RPB3YIL021W TRM732Q03496 1420 aa5.48□□□□□ -1.53
RPB3YIL021W YDJ1P25491 409 aaKnown RBP5.47□□□□□ -1.53
RPB3YIL021W DLD1P32891 587 aa5.47□□□□□ -1.53
RPB3YIL021W YBL036CP38197 257 aa5.47□□□□□ -1.53
RPB3YIL021W APL6P46682 809 aa5.47□□□□□ -1.53
RPB3YIL021W YJR098CP47139 656 aa5.47□□□□□ -1.53
RPB3YIL021W BRL1P38770 471 aa5.46□□□□□ -1.54
RPB3YIL021W LSC2P53312 427 aa5.46□□□□□ -1.54
RPB3YIL021W CAF120P53836 1060 aa5.46□□□□□ -1.54
RPB3YIL021W STE20Q03497 939 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms