RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeastyeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP140YOR239W YJR111CP47148 283 aaKnown RBP3.56□□□□□ -1.84
ABP140YOR239W BRE5P53741 515 aaKnown RBP3.56□□□□□ -1.84
ABP140YOR239W YNL181WP53878 407 aa3.56□□□□□ -1.84
ABP140YOR239W VPS9P54787 451 aa3.56□□□□□ -1.84
ABP140YOR239W TOF2Q02208 771 aa3.56□□□□□ -1.84
ABP140YOR239W YPL014WQ02606 381 aa3.56□□□□□ -1.84
ABP140YOR239W MRP51Q02950 344 aa3.56□□□□□ -1.84
ABP140YOR239W DOT1Q04089 582 aaKnown RBP3.56□□□□□ -1.84
ABP140YOR239W MRI1Q06489 411 aaKnown RBP3.56□□□□□ -1.84
ABP140YOR239W MFG1Q07684 458 aa3.56□□□□□ -1.84
ABP140YOR239W LDB18Q07887 179 aa3.56□□□□□ -1.84
ABP140YOR239W FDH1Q08911 376 aa3.56□□□□□ -1.84
ABP140YOR239W RAD28Q12021 506 aa3.56□□□□□ -1.84
ABP140YOR239W RMD5Q12508 421 aa3.56□□□□□ -1.84
ABP140YOR239W MHT1Q12525 324 aa3.56□□□□□ -1.84
ABP140YOR239W DST1P07273 309 aa3.55□□□□□ -1.84
ABP140YOR239W GCY1P14065 312 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
ABP140YOR239W RPB3P16370 318 aaKnown RBP3.55□□□□□ -1.84
ABP140YOR239W PDX1P16451 410 aa3.55□□□□□ -1.84
ABP140YOR239W MDH1P17505 334 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
ABP140YOR239W SEC59P20048 519 aa3.55□□□□□ -1.84
ABP140YOR239W HMX1P32339 317 aa3.55□□□□□ -1.84
ABP140YOR239W SPS19P32573 292 aaKnown RBP3.55□□□□□ -1.84
ABP140YOR239W MOT2P34909 587 aaKnown RBP3.55□□□□□ -1.84
ABP140YOR239W IRS4P36115 615 aaKnown RBP3.55□□□□□ -1.84
ABP140YOR239W AHP1P38013 176 aaKnown RBP3.55□□□□□ -1.84
ABP140YOR239W DTR1P38125 572 aa3.55□□□□□ -1.84
ABP140YOR239W RCK1P38622 512 aa3.55□□□□□ -1.84
ABP140YOR239W MNL1P38888 796 aa3.55□□□□□ -1.84
ABP140YOR239W BAP3P41815 604 aa3.55□□□□□ -1.84
ABP140YOR239W CAK1P43568 368 aaPredicted RBP3.55□□□□□ -1.84
ABP140YOR239W PTR3P43606 678 aa3.55□□□□□ -1.84
ABP140YOR239W YJR012CP47087 207 aa3.55□□□□□ -1.84
ABP140YOR239W YJR154WP47181 346 aa3.55□□□□□ -1.84
ABP140YOR239W HXT16P47185 567 aa3.55□□□□□ -1.84
ABP140YOR239W NUP57P48837 541 aa3.55□□□□□ -1.84
ABP140YOR239W AZR1P50080 613 aa3.55□□□□□ -1.84
ABP140YOR239W SOL1P50278 321 aa3.55□□□□□ -1.84
ABP140YOR239W YGL159WP53110 370 aa3.55□□□□□ -1.84
ABP140YOR239W ROG1P53118 685 aa3.55□□□□□ -1.84
ABP140YOR239W MPA43P53583 542 aaPredicted RBP3.55□□□□□ -1.84
ABP140YOR239W ARG5,6Q01217 863 aa3.55□□□□□ -1.84
ABP140YOR239W ROD1Q02805 837 aa3.55□□□□□ -1.84
ABP140YOR239W SLD5Q03406 294 aa3.55□□□□□ -1.84
ABP140YOR239W SKY1Q03656 742 aa3.55□□□□□ -1.84
ABP140YOR239W SPC19Q03954 165 aa3.55□□□□□ -1.84
ABP140YOR239W ATC1Q04005 294 aa3.55□□□□□ -1.84
ABP140YOR239W YMR130WQ04223 302 aa3.55□□□□□ -1.84
ABP140YOR239W YMR034CQ05131 434 aaPredicted RBP3.55□□□□□ -1.84
ABP140YOR239W CDC123Q05791 360 aa3.55□□□□□ -1.84
ABP140YOR239W YLR455WQ06188 304 aa3.55□□□□□ -1.84
ABP140YOR239W AIM6Q07716 390 aa3.55□□□□□ -1.84
ABP140YOR239W NYV1Q12255 253 aa3.55□□□□□ -1.84
ABP140YOR239W YDL199CQ12407 687 aa3.55□□□□□ -1.84
ABP140YOR239W COA6Q3E846 104 aa3.55□□□□□ -1.84
ABP140YOR239W THP2O13539 261 aaKnown RBP3.54□□□□□ -1.84
ABP140YOR239W PRC1P00729 532 aa3.54□□□□□ -1.84
ABP140YOR239W AI1P03875 834 aa3.54□□□□□ -1.84
ABP140YOR239W CAN1P04817 590 aa3.54□□□□□ -1.84
ABP140YOR239W HAP2P06774 265 aa3.54□□□□□ -1.84
ABP140YOR239W NHP6BP11633 99 aaKnown RBP3.54□□□□□ -1.84
ABP140YOR239W SEC12P11655 471 aa3.54□□□□□ -1.84
ABP140YOR239W HOP1P20050 605 aa3.54□□□□□ -1.84
ABP140YOR239W VMA3P25515 160 aa3.54□□□□□ -1.84
ABP140YOR239W PRP45P28004 379 aaPredicted RBP3.54□□□□□ -1.84
ABP140YOR239W CYS3P31373 394 aaKnown RBP3.54□□□□□ -1.84
ABP140YOR239W MLF3P32047 452 aa3.54□□□□□ -1.84
ABP140YOR239W ARP2P32381 391 aaKnown RBP3.54□□□□□ -1.84
ABP140YOR239W LIP5P32875 414 aa3.54□□□□□ -1.84
ABP140YOR239W SDH4P37298 181 aa3.54□□□□□ -1.84
ABP140YOR239W FLR1P38124 548 aa3.54□□□□□ -1.84
ABP140YOR239W FIG1P38224 298 aa3.54□□□□□ -1.84
ABP140YOR239W SHE3P38272 425 aaKnown RBP3.54□□□□□ -1.84
ABP140YOR239W PEX28P38848 579 aa3.54□□□□□ -1.84
ABP140YOR239W AIM46P38885 310 aa3.54□□□□□ -1.84
ABP140YOR239W HPA3P39979 161 aa3.54□□□□□ -1.84
ABP140YOR239W BUR6P40096 142 aa3.54□□□□□ -1.84
ABP140YOR239W NTA1P40354 457 aa3.54□□□□□ -1.84
ABP140YOR239W LCB2P40970 561 aa3.54□□□□□ -1.84
ABP140YOR239W ALY2P47029 1046 aa3.54□□□□□ -1.84
ABP140YOR239W TAD2P47058 250 aa3.54□□□□□ -1.84
ABP140YOR239W DAN1P47178 298 aa3.54□□□□□ -1.84
ABP140YOR239W GCV1P48015 400 aa3.54□□□□□ -1.84
ABP140YOR239W PHO23P50947 330 aa3.54□□□□□ -1.84
ABP140YOR239W YGL185CP53100 379 aa3.54□□□□□ -1.84
ABP140YOR239W YGL101WP53144 215 aa3.54□□□□□ -1.84
ABP140YOR239W YNR029CP53729 429 aaKnown RBP3.54□□□□□ -1.84
ABP140YOR239W YDC1Q02896 317 aa3.54□□□□□ -1.84
ABP140YOR239W CTK1Q03957 528 aaKnown RBP3.54□□□□□ -1.84
ABP140YOR239W SHH3Q04487 196 aa3.54□□□□□ -1.84
ABP140YOR239W MSC3Q05812 728 aa3.54□□□□□ -1.84
ABP140YOR239W IZH3Q07959 543 aa3.54□□□□□ -1.84
ABP140YOR239W RRT8Q08219 342 aa3.54□□□□□ -1.84
ABP140YOR239W INP54Q08227 384 aaKnown RBP3.54□□□□□ -1.84
ABP140YOR239W PSF1Q12488 208 aa3.54□□□□□ -1.84
ABP140YOR239W Q0182Q9ZZW1 134 aa3.54□□□□□ -1.84
ABP140YOR239W SLH1P53327 1967 aaKnown RBP3.54□□□□□ -1.84
ABP140YOR239W UBR2Q07963 1872 aa3.54□□□□□ -1.84
ABP140YOR239W SUC2P00724 532 aa3.54□□□□□ -1.84
ABP140YOR239W HXK2P04807 486 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms