RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeastyeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP140YOR239W FAP1P53971 965 aa7.58□□□□□ -1.2
ABP140YOR239W MTC1P47018 478 aaKnown RBP7.27□□□□□ -1.25
ABP140YOR239W PRY3P47033 881 aa7.16□□□□□ -1.26
ABP140YOR239W DRS1P32892 752 aaKnown RBP7.15□□□□□ -1.27
ABP140YOR239W YCK3P39962 524 aa6.7□□□□□ -1.34
ABP140YOR239W AAD16Q02895 342 aa6.66□□□□□ -1.34
ABP140YOR239W HAA1Q12753 694 aaKnown RBP6.64□□□□□ -1.35
ABP140YOR239W PRI1P10363 409 aa6.58□□□□□ -1.36
ABP140YOR239W ISW2Q08773 1120 aa6.23□□□□□ -1.41
ABP140YOR239W BFR2Q06631 534 aaKnown RBP6.19□□□□□ -1.42
ABP140YOR239W TSR3Q12094 313 aaKnown RBP6.17□□□□□ -1.42
ABP140YOR239W RPG1P38249 964 aaKnown RBP6.16□□□□□ -1.42
ABP140YOR239W AVT3P36062 692 aa6.11□□□□□ -1.43
ABP140YOR239W DIP2Q12220 943 aaPredicted RBP6.08□□□□□ -1.44
ABP140YOR239W YGL015CP33199 130 aa5.96□□□□□ -1.45
ABP140YOR239W TFA1P36100 482 aa5.96□□□□□ -1.45
ABP140YOR239W MRPL32P25348 183 aa5.96□□□□□ -1.46
ABP140YOR239W BUD31P25337 157 aaPredicted RBP5.9□□□□□ -1.46
ABP140YOR239W RQC2Q12532 1038 aaKnown RBP5.79□□□□□ -1.48
ABP140YOR239W RSE1Q04693 1361 aaKnown RBP5.67□□□□□ -1.5
ABP140YOR239W REB1P21538 810 aa5.55□□□□□ -1.52
ABP140YOR239W SIS1P25294 352 aaKnown RBP5.54□□□□□ -1.52
ABP140YOR239W NOP2P40991 618 aaKnown RBP5.54□□□□□ -1.52
ABP140YOR239W INO80P53115 1489 aa5.5□□□□□ -1.53
ABP140YOR239W RPL17AP05740 184 aaKnown RBP5.48□□□□□ -1.53
ABP140YOR239W RPL17BP46990 184 aaKnown RBP5.48□□□□□ -1.53
ABP140YOR239W MON2P48563 1636 aaPredicted RBP5.46□□□□□ -1.54
ABP140YOR239W CDC27P38042 758 aa5.45□□□□□ -1.54
ABP140YOR239W UBP10P53874 792 aaPredicted RBP5.44□□□□□ -1.54
ABP140YOR239W MAP2P38174 421 aaKnown RBP5.41□□□□□ -1.54
ABP140YOR239W SPT21P35209 758 aa5.4□□□□□ -1.55
ABP140YOR239W EBP2P36049 427 aaKnown RBP5.37□□□□□ -1.55
ABP140YOR239W CAB3P36076 571 aa5.37□□□□□ -1.55
ABP140YOR239W UBP9P39967 754 aa5.36□□□□□ -1.55
ABP140YOR239W NSR1P27476 414 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
ABP140YOR239W RIM101P33400 625 aa5.32□□□□□ -1.56
ABP140YOR239W URN1Q06525 465 aaKnown RBP5.3□□□□□ -1.56
ABP140YOR239W SKI3P17883 1432 aaKnown RBP5.28□□□□□ -1.56
ABP140YOR239W SPA2P23201 1466 aaKnown RBP5.27□□□□□ -1.57
ABP140YOR239W YKR023WP36119 530 aaKnown RBP5.27□□□□□ -1.57
ABP140YOR239W TIF4632P39936 914 aaKnown RBP5.26□□□□□ -1.57
ABP140YOR239W DNA2P38859 1522 aa5.24□□□□□ -1.57
ABP140YOR239W SIS2P36024 562 aa5.24□□□□□ -1.57
ABP140YOR239W TGL3P40308 642 aa5.24□□□□□ -1.57
ABP140YOR239W OXP1P28273 1286 aa5.18□□□□□ -1.58
ABP140YOR239W HOP09932 586 aa5.17□□□□□ -1.58
ABP140YOR239W TFC8Q12308 588 aa5.17□□□□□ -1.58
ABP140YOR239W SLX5P32828 619 aaKnown RBP5.16□□□□□ -1.58
ABP140YOR239W SCY1P53009 804 aa5.16□□□□□ -1.58
ABP140YOR239W DCD1P06773 312 aa5.15□□□□□ -1.59
ABP140YOR239W YPR148CQ06523 435 aa5.13□□□□□ -1.59
ABP140YOR239W SWR1Q05471 1514 aa5.11□□□□□ -1.59
ABP140YOR239W SSN2P38931 1420 aa5.1□□□□□ -1.59
ABP140YOR239W PTP3P40048 928 aa5.09□□□□□ -1.6
ABP140YOR239W KOG1P38873 1557 aa5.08□□□□□ -1.6
ABP140YOR239W TAF7Q05021 590 aa5.07□□□□□ -1.6
ABP140YOR239W SSP1P38871 571 aa5.05□□□□□ -1.6
ABP140YOR239W SGS1P35187 1447 aa5.04□□□□□ -1.6
ABP140YOR239W YLR271WQ06152 274 aa5.03□□□□□ -1.6
ABP140YOR239W TCB3Q03640 1545 aaKnown RBP5.02□□□□□ -1.61
ABP140YOR239W YFR016CP43597 1233 aaKnown RBP5.01□□□□□ -1.61
ABP140YOR239W ENP1P38333 483 aaKnown RBP5□□□□□ -1.61
ABP140YOR239W TCB2P48231 1178 aa4.98□□□□□ -1.61
ABP140YOR239W YAH1Q12184 172 aaKnown RBP4.98□□□□□ -1.61
ABP140YOR239W BCH2P36122 765 aa4.97□□□□□ -1.61
ABP140YOR239W YBL029C-AQ3E756 94 aa4.97□□□□□ -1.61
ABP140YOR239W RPS0BP46654 252 aaKnown RBP4.96□□□□□ -1.61
ABP140YOR239W RSM7P47150 247 aa4.94□□□□□ -1.62
ABP140YOR239W YIL055CP40523 627 aaKnown RBP4.93□□□□□ -1.62
ABP140YOR239W TY1B-DR4Q07793 1604 aa4.92□□□□□ -1.62
ABP140YOR239W MNN4P36044 1178 aa4.92□□□□□ -1.62
ABP140YOR239W DMA1P38823 416 aa4.92□□□□□ -1.62
ABP140YOR239W MST1P07236 462 aa4.9□□□□□ -1.62
ABP140YOR239W CST9Q06032 482 aa4.9□□□□□ -1.63
ABP140YOR239W STH1P32597 1359 aa4.89□□□□□ -1.63
ABP140YOR239W CHD1P32657 1468 aa4.89□□□□□ -1.63
ABP140YOR239W PSD2P53037 1138 aaKnown RBP4.89□□□□□ -1.63
ABP140YOR239W YOR238WQ08634 303 aa4.88□□□□□ -1.63
ABP140YOR239W CLC1P17891 233 aa4.87□□□□□ -1.63
ABP140YOR239W MGA2P40578 1113 aa4.86□□□□□ -1.63
ABP140YOR239W VNX1P42839 908 aa4.86□□□□□ -1.63
ABP140YOR239W ARP8Q12386 881 aaKnown RBP RIP-Chip data4.86□□□□□ -1.63not detected
ABP140YOR239W MMS22Q06164 1454 aa4.86□□□□□ -1.63
ABP140YOR239W AI2P03876 854 aa4.86□□□□□ -1.63
ABP140YOR239W UFD4P33202 1483 aa4.86□□□□□ -1.63
ABP140YOR239W YJL171CP46992 396 aa4.85□□□□□ -1.63
ABP140YOR239W CWC22P53333 577 aaKnown RBP4.85□□□□□ -1.63
ABP140YOR239W QCR6P00127 147 aa4.84□□□□□ -1.63
ABP140YOR239W RLF2Q12495 606 aa4.84□□□□□ -1.63
ABP140YOR239W SEC3P33332 1336 aaKnown RBP4.84□□□□□ -1.64
ABP140YOR239W IME2P32581 645 aa4.83□□□□□ -1.64
ABP140YOR239W SPP1Q03012 353 aa4.83□□□□□ -1.64
ABP140YOR239W LEO1P38439 464 aa4.83□□□□□ -1.64
ABP140YOR239W YRB30P53107 440 aaPredicted RBP4.82□□□□□ -1.64
ABP140YOR239W NOP53Q12080 455 aaKnown RBP4.82□□□□□ -1.64
ABP140YOR239W PRS1P32895 427 aaKnown RBP4.81□□□□□ -1.64
ABP140YOR239W AIR2Q12476 344 aaKnown RBP4.81□□□□□ -1.64
ABP140YOR239W AIM44Q99299 758 aa4.81□□□□□ -1.64
ABP140YOR239W EPS1P40557 701 aa4.81□□□□□ -1.64
ABP140YOR239W KRI1P42846 591 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 55.2 ms