RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W PDR11P40550 1411 aa2.3□□□□□ -2.04
CSI1YMR025W PDR5P33302 1511 aaKnown RBP2.29□□□□□ -2.04
CSI1YMR025W IKI3Q06706 1349 aaKnown RBP2.29□□□□□ -2.04
CSI1YMR025W BRF1P29056 596 aa2.29□□□□□ -2.04
CSI1YMR025W LSM5P40089 93 aaKnown RBP2.29□□□□□ -2.04
CSI1YMR025W STB1P42845 420 aa2.29□□□□□ -2.04
CSI1YMR025W SPR6Q01684 191 aa2.29□□□□□ -2.04
CSI1YMR025W ROY1Q04847 553 aa2.29□□□□□ -2.04
CSI1YMR025W PAB1P04147 577 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04 RIP-Chip
CSI1YMR025W ALG1P16661 449 aa2.28□□□□□ -2.04
CSI1YMR025W YCR051WP25631 222 aa2.28□□□□□ -2.04
CSI1YMR025W MSP1P28737 362 aa2.28□□□□□ -2.04
CSI1YMR025W TOA1P32773 286 aa2.28□□□□□ -2.04
CSI1YMR025W BYE1P36106 594 aa2.28□□□□□ -2.04
CSI1YMR025W LSM12P38828 187 aaKnown RBP2.28□□□□□ -2.04
CSI1YMR025W KEG1P43614 200 aa2.28□□□□□ -2.04
CSI1YMR025W PRP38Q00723 242 aaPredicted RBP2.28□□□□□ -2.04
CSI1YMR025W YLR177WQ06251 628 aa2.28□□□□□ -2.04
CSI1YMR025W AFI1Q99222 893 aa2.28□□□□□ -2.04
CSI1YMR025W YBT1P32386 1661 aa2.28□□□□□ -2.05
CSI1YMR025W YGR117CP53270 476 aa2.27□□□□□ -2.05
CSI1YMR025W ZRG17P53735 605 aa2.27□□□□□ -2.05
CSI1YMR025W ACL4Q03771 387 aa2.27□□□□□ -2.05
CSI1YMR025W SPC19Q03954 165 aa2.27□□□□□ -2.05
CSI1YMR025W DDC1Q08949 612 aa2.27□□□□□ -2.05
CSI1YMR025W NUP188P52593 1655 aaKnown RBP2.27□□□□□ -2.05
CSI1YMR025W IML1P47170 1584 aa2.27□□□□□ -2.05
CSI1YMR025W BCK1Q01389 1478 aa2.26□□□□□ -2.05
CSI1YMR025W RAD9P14737 1309 aa2.26□□□□□ -2.05
CSI1YMR025W ZIP1P31111 875 aa2.26□□□□□ -2.05
CSI1YMR025W CBF5P33322 483 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
CSI1YMR025W HEM14P40012 539 aa2.26□□□□□ -2.05
CSI1YMR025W YER079WP40052 210 aaKnown RBP2.26□□□□□ -2.05
CSI1YMR025W MSC3Q05812 728 aa2.26□□□□□ -2.05
CSI1YMR025W YOR376WQ08900 122 aa2.26□□□□□ -2.05
CSI1YMR025W MED2Q12124 431 aa2.26□□□□□ -2.05
CSI1YMR025W USO1P25386 1790 aa2.26□□□□□ -2.05
CSI1YMR025W DST1P07273 309 aa2.25□□□□□ -2.05
CSI1YMR025W EPT1P22140 391 aa2.25□□□□□ -2.05
CSI1YMR025W RPC53P25441 422 aa2.25□□□□□ -2.05
CSI1YMR025W SPO23P33757 523 aa2.25□□□□□ -2.05
CSI1YMR025W HEL1P36113 551 aa2.25□□□□□ -2.05
CSI1YMR025W TRR2P38816 342 aa2.25□□□□□ -2.05
CSI1YMR025W GPI16P38875 610 aa2.25□□□□□ -2.05
CSI1YMR025W MMF1P40185 145 aaKnown RBP2.25□□□□□ -2.05
CSI1YMR025W YJL144WP47009 104 aa2.25□□□□□ -2.05
CSI1YMR025W BNI5P53890 448 aaKnown RBP2.25□□□□□ -2.05
CSI1YMR025W REX2P54964 269 aaKnown RBP2.25□□□□□ -2.05
CSI1YMR025W SRO7Q12038 1033 aa2.25□□□□□ -2.05
CSI1YMR025W PCL9Q12477 304 aa2.25□□□□□ -2.05
CSI1YMR025W MTR10Q99189 972 aa2.25□□□□□ -2.05
CSI1YMR025W GPX2P38143 162 aa2.24□□□□□ -2.05
CSI1YMR025W SLM4P38247 162 aa2.24□□□□□ -2.05
CSI1YMR025W VAC7P53950 1165 aa2.24□□□□□ -2.05
CSI1YMR025W RPN9Q04062 393 aaKnown RBP2.24□□□□□ -2.05
CSI1YMR025W MMR1Q06324 491 aa2.24□□□□□ -2.05
CSI1YMR025W AUS1Q08409 1394 aa2.23□□□□□ -2.05
CSI1YMR025W YPR096CO13587 100 aa2.23□□□□□ -2.05
CSI1YMR025W ADK2P26364 225 aa2.23□□□□□ -2.05
CSI1YMR025W SRB2P34162 210 aa2.23□□□□□ -2.05
CSI1YMR025W CAK1P43568 368 aaPredicted RBP2.23□□□□□ -2.05
CSI1YMR025W TRM112P53738 135 aaPredicted RBP2.23□□□□□ -2.05
CSI1YMR025W YDR131CQ03899 556 aa2.23□□□□□ -2.05
CSI1YMR025W MRX8Q05473 314 aa2.23□□□□□ -2.05
CSI1YMR025W FAR10Q06001 478 aa2.23□□□□□ -2.05
CSI1YMR025W VPS54Q12071 889 aa2.23□□□□□ -2.05
CSI1YMR025W TOM1Q03280 3268 aa2.23□□□□□ -2.05
CSI1YMR025W RPS18AP0CX55 146 aaKnown RBP2.22□□□□□ -2.05
CSI1YMR025W RPS18BP0CX56 146 aaPredicted RBP2.22□□□□□ -2.05
CSI1YMR025W PDX1P16451 410 aa2.22□□□□□ -2.05
CSI1YMR025W FUS3P16892 353 aaKnown RBP2.22□□□□□ -2.05
CSI1YMR025W SKT5P34226 696 aa2.22□□□□□ -2.05
CSI1YMR025W FRM2P37261 193 aa2.22□□□□□ -2.05
CSI1YMR025W ASC1P38011 319 aaKnown RBP2.22□□□□□ -2.05
CSI1YMR025W TRF5P48561 642 aaKnown RBP2.22□□□□□ -2.05
CSI1YMR025W TOM22P49334 152 aa2.22□□□□□ -2.05
CSI1YMR025W ERB1Q04660 807 aaKnown RBP2.22□□□□□ -2.05
CSI1YMR025W SLM3Q12093 417 aa2.22□□□□□ -2.05
CSI1YMR025W SFM1Q12314 213 aa2.22□□□□□ -2.05
CSI1YMR025W LDB17Q12342 491 aa2.22□□□□□ -2.05
CSI1YMR025W TY3B-IQ7LHG5 1498 aaKnown RBP2.21□□□□□ -2.06
CSI1YMR025W ERV1P27882 189 aa2.21□□□□□ -2.06
CSI1YMR025W URA7P28274 579 aaKnown RBP2.21□□□□□ -2.06
CSI1YMR025W OLA1P38219 394 aaKnown RBP2.21□□□□□ -2.06
CSI1YMR025W RRT13P40042 185 aa2.21□□□□□ -2.06
CSI1YMR025W VHS2P40463 436 aa2.21□□□□□ -2.06
CSI1YMR025W RPT4P53549 437 aaKnown RBP2.21□□□□□ -2.06
CSI1YMR025W RMT2Q03305 412 aa2.21□□□□□ -2.06
CSI1YMR025W RUP1Q12242 671 aa2.21□□□□□ -2.06
CSI1YMR025W HMS1Q12398 434 aa2.21□□□□□ -2.06
CSI1YMR025W SPT7P35177 1332 aa2.2□□□□□ -2.06
CSI1YMR025W CDC21P06785 304 aa2.2□□□□□ -2.06
CSI1YMR025W CLB1P24868 471 aa2.2□□□□□ -2.06
CSI1YMR025W DBF4P32325 704 aa2.2□□□□□ -2.06
CSI1YMR025W VMA8P32610 256 aaKnown RBP2.2□□□□□ -2.06
CSI1YMR025W MCR1P36060 302 aaKnown RBP2.2□□□□□ -2.06
CSI1YMR025W COS4P43542 379 aa2.2□□□□□ -2.06
CSI1YMR025W PRP42Q03776 544 aaKnown RBP2.2□□□□□ -2.06
CSI1YMR025W INP2Q03824 705 aa2.2□□□□□ -2.06
CSI1YMR025W ERP4Q12450 207 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 103.6 ms