Protein–RNA interactions for Protein: P40042

RRT13, Regulator of rDNA transcription protein 13, yeastyeast

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRT13P40042 NSR1YGR159C 1245 nt15.12■□□□□ 0.01
RRT13P40042 YML009W-BYML009W-B 477 nt15.02■□□□□ -0
RRT13P40042 NOP1YDL014W 984 nt14.53□□□□□ -0.08
RRT13P40042 MDJ1YFL016C 1536 nt13.59□□□□□ -0.23
RRT13P40042 YKL036CYKL036C 393 nt13.22□□□□□ -0.29
RRT13P40042 SRX1YKL086W 384 nt12.7□□□□□ -0.38
RRT13P40042 Q0297Q0297 156 nt12.66□□□□□ -0.38
RRT13P40042 YJL027CYJL027C 417 nt12.55□□□□□ -0.4
RRT13P40042 YCR051WYCR051W 669 nt12.03□□□□□ -0.48
RRT13P40042 DBP2YNL112W 1641 nt11.96□□□□□ -0.5
RRT13P40042 SCS3YGL126W 1143 nt11.91□□□□□ -0.5
RRT13P40042 YBR190WYBR190W 312 nt11.66□□□□□ -0.54
RRT13P40042 TRN1tP(UGG)A 72 nt11.59□□□□□ -0.55
RRT13P40042 SUF9tP(UGG)F 72 nt11.59□□□□□ -0.55
RRT13P40042 SUF8tP(UGG)H 72 nt11.59□□□□□ -0.55
RRT13P40042 tP(UGG)LtP(UGG)L 72 nt11.59□□□□□ -0.55
RRT13P40042 SUF7tP(UGG)M 72 nt11.59□□□□□ -0.55
RRT13P40042 tP(UGG)N1tP(UGG)N1 72 nt11.59□□□□□ -0.55
RRT13P40042 tP(UGG)N2tP(UGG)N2 72 nt11.59□□□□□ -0.55
RRT13P40042 tP(UGG)O1tP(UGG)O1 72 nt11.59□□□□□ -0.55
RRT13P40042 SUF11tP(UGG)O2 72 nt11.59□□□□□ -0.55
RRT13P40042 CCC1YLR220W 969 nt11.48□□□□□ -0.57
RRT13P40042 YOL085CYOL085C 342 nt11.46□□□□□ -0.57
RRT13P40042 RTC3YHR087W 336 nt11.39□□□□□ -0.59
RRT13P40042 RPP1BYDL130W 321 nt11.35□□□□□ -0.59
RRT13P40042 SSA3YBL075C 1950 nt11.3□□□□□ -0.6
RRT13P40042 PKP1YIL042C 1185 nt11.3□□□□□ -0.6
RRT13P40042 RVS167YDR388W 1449 nt11.2□□□□□ -0.62
RRT13P40042 SCJ1YMR214W 1134 nt11.08□□□□□ -0.64
RRT13P40042 tP(UGG)O3tP(UGG)O3 72 nt10.91□□□□□ -0.66
RRT13P40042 PET122YER153C 765 nt10.86□□□□□ -0.67
RRT13P40042 SHR5YOL110W 714 nt10.76□□□□□ -0.69
RRT13P40042 PUT4YOR348C 1884 nt10.74□□□□□ -0.69
RRT13P40042 SCR1SCR1 522 nt10.7□□□□□ -0.7
RRT13P40042 ATS1YAL020C 1002 nt10.61□□□□□ -0.71
RRT13P40042 URN1YPR152C 1398 nt10.59□□□□□ -0.71
RRT13P40042 YDJ1YNL064C 1230 nt10.56□□□□□ -0.72
RRT13P40042 RRN5YLR141W 1092 nt10.54□□□□□ -0.72
RRT13P40042 DEP1YAL013W 1218 nt10.52□□□□□ -0.73
RRT13P40042 OPI9YLR338W 858 nt10.48□□□□□ -0.73
RRT13P40042 ARE1YCR048W 1833 nt10.48□□□□□ -0.73
RRT13P40042 SAH1YER043C 1350 nt10.46□□□□□ -0.74
RRT13P40042 RPN10YHR200W 807 nt10.39□□□□□ -0.75
RRT13P40042 POA1YBR022W 534 nt10.39□□□□□ -0.75
RRT13P40042 GAR1YHR089C 618 nt10.35□□□□□ -0.75
RRT13P40042 YHR049C-AYHR049C-A 297 nt10.34□□□□□ -0.75
RRT13P40042 YNL208WYNL208W 600 nt10.34□□□□□ -0.75
RRT13P40042 YER088W-BYER088W-B 147 nt10.32□□□□□ -0.76
RRT13P40042 RSB1YOR049C 1065 nt10.26□□□□□ -0.77
RRT13P40042 BSC6YOL137W 1494 nt10.19□□□□□ -0.78
RRT13P40042 PUN1YLR414C 792 nt10.17□□□□□ -0.78
RRT13P40042 BUD23YCR047C 828 nt10.09□□□□□ -0.79
RRT13P40042 YJR018WYJR018W 363 nt10.09□□□□□ -0.79
RRT13P40042 PTC2YER089C 1395 nt10.08□□□□□ -0.8
RRT13P40042 TIR1YER011W 765 nt10.01□□□□□ -0.81
RRT13P40042 NAB2YGL122C 1578 nt9.98□□□□□ -0.81
RRT13P40042 SSA1YAL005C 1929 nt9.93□□□□□ -0.82
RRT13P40042 YJR120WYJR120W 351 nt9.88□□□□□ -0.83
RRT13P40042 PST2YDR032C 597 nt9.87□□□□□ -0.83
RRT13P40042 SPT5YML010W 3192 nt9.87□□□□□ -0.83
RRT13P40042 RPP2BYDR382W 333 nt9.83□□□□□ -0.84
RRT13P40042 DAL1YIR027C 1383 nt9.8□□□□□ -0.84
RRT13P40042 FIS1YIL065C 468 nt9.8□□□□□ -0.84
RRT13P40042 FPR4YLR449W 1179 nt9.78□□□□□ -0.84
RRT13P40042 INM2YDR287W 879 nt9.77□□□□□ -0.85
RRT13P40042 SSA4YER103W 1929 nt9.72□□□□□ -0.85
RRT13P40042 SRB2YHR041C 633 nt9.72□□□□□ -0.85
RRT13P40042 PHO4YFR034C 939 nt9.7□□□□□ -0.86
RRT13P40042 YBL100CYBL100C 315 nt9.62□□□□□ -0.87
RRT13P40042 BDH2YAL061W 1254 nt9.6□□□□□ -0.87
RRT13P40042 PAC11YDR488C 1602 nt9.6□□□□□ -0.87
RRT13P40042 YPS1YLR120C 1710 nt9.59□□□□□ -0.87
RRT13P40042 MEP2YNL142W 1500 nt9.59□□□□□ -0.87
RRT13P40042 WWM1YFL010C 636 nt9.53□□□□□ -0.88
RRT13P40042 NVJ2YPR091C 2313 nt9.52□□□□□ -0.89
RRT13P40042 FUN26YAL022C 1554 nt9.5□□□□□ -0.89
RRT13P40042 YDR095CYDR095C 411 nt9.5□□□□□ -0.89
RRT13P40042 SHU1YHL006C 453 nt9.5□□□□□ -0.89
RRT13P40042 YHR165W-AYHR165W-A 312 nt9.5□□□□□ -0.89
RRT13P40042 TRM9YML014W 840 nt9.47□□□□□ -0.89
RRT13P40042 LSM3YLR438C-A 270 nt9.45□□□□□ -0.9
RRT13P40042 DCW1YKL046C 1350 nt9.43□□□□□ -0.9
RRT13P40042 YGR021WYGR021W 873 nt9.42□□□□□ -0.9
RRT13P40042 YAL037C-BYAL037C-B 975 nt9.42□□□□□ -0.9
RRT13P40042 ALF1YNL148C 765 nt9.42□□□□□ -0.9
RRT13P40042 BDF1YLR399C 2061 nt9.4□□□□□ -0.91
RRT13P40042 YFL021C-AYFL021C-A 855 nt9.39□□□□□ -0.91
RRT13P40042 HOM6YJR139C 1080 nt9.38□□□□□ -0.91
RRT13P40042 CCT6YDR188W 1641 nt9.37□□□□□ -0.91
RRT13P40042 YKL097CYKL097C 411 nt9.36□□□□□ -0.91
RRT13P40042 RPP2AYOL039W 321 nt9.33□□□□□ -0.92
RRT13P40042 EMI2YDR516C 1503 nt9.31□□□□□ -0.92
RRT13P40042 PTP1YDL230W 1008 nt9.31□□□□□ -0.92
RRT13P40042 SUF2tP(AGG)C 72 nt9.31□□□□□ -0.92
RRT13P40042 SUF10tP(AGG)N 72 nt9.31□□□□□ -0.92
RRT13P40042 Q0182Q0182 405 nt9.31□□□□□ -0.92
RRT13P40042 FPS1YLL043W 2010 nt9.29□□□□□ -0.92
RRT13P40042 MNP1YGL068W 585 nt9.29□□□□□ -0.92
RRT13P40042 TAT1YBR069C 1860 nt9.28□□□□□ -0.92
RRT13P40042 YMR090WYMR090W 684 nt9.28□□□□□ -0.92
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms