RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeast

Gene PTC1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTC1	YDL006W	LDB17	Q12342	491 aa		4.23	□□□□□ -1.73
PTC1	YDL006W	YLR422W	Q06409	1932 aa		4.23	□□□□□ -1.73
PTC1	YDL006W	YAR066W	P0CX18	203 aa		4.22	□□□□□ -1.73
PTC1	YDL006W	YHR214W	P0CX19	203 aa		4.22	□□□□□ -1.73
PTC1	YDL006W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
PTC1	YDL006W	YCR022C	P25620	114 aa		4.22	□□□□□ -1.73
PTC1	YDL006W	URA10	P30402	227 aa		4.22	□□□□□ -1.73
PTC1	YDL006W	HIR2	P32480	875 aa		4.22	□□□□□ -1.73
PTC1	YDL006W	ECM25	P32525	599 aa		4.22	□□□□□ -1.73
PTC1	YDL006W	MRPL40	P36534	297 aa		4.22	□□□□□ -1.73
PTC1	YDL006W	ISC1	P40015	477 aa	Known RBP	4.22	□□□□□ -1.73
PTC1	YDL006W	YJL213W	P40896	331 aa		4.22	□□□□□ -1.73
PTC1	YDL006W	MEP2	P41948	499 aa		4.22	□□□□□ -1.73
PTC1	YDL006W	RPS0B	P46654	252 aa	Known RBP	4.22	□□□□□ -1.73
PTC1	YDL006W	ODC1	Q03028	310 aa		4.22	□□□□□ -1.73
PTC1	YDL006W	YLR012C	Q07927	99 aa		4.22	□□□□□ -1.73
PTC1	YDL006W	YBR298C-A	Q8TGK4	73 aa		4.22	□□□□□ -1.73
PTC1	YDL006W	SCEI	P03882	235 aa		4.21	□□□□□ -1.74
PTC1	YDL006W	GPA2	P10823	449 aa		4.21	□□□□□ -1.74
PTC1	YDL006W	HEM15	P16622	393 aa		4.21	□□□□□ -1.74
PTC1	YDL006W	CLN1	P20437	546 aa		4.21	□□□□□ -1.74
PTC1	YDL006W	BEM1	P29366	551 aa		4.21	□□□□□ -1.74
PTC1	YDL006W	FMP46	P36141	133 aa	Known RBP	4.21	□□□□□ -1.74
PTC1	YDL006W	SLM4	P38247	162 aa		4.21	□□□□□ -1.74
PTC1	YDL006W	DSN1	P40568	576 aa		4.21	□□□□□ -1.74
PTC1	YDL006W	SAS2	P40963	338 aa		4.21	□□□□□ -1.74
PTC1	YDL006W	GCD10	P41814	478 aa		4.21	□□□□□ -1.74
PTC1	YDL006W	TRS85	P46944	698 aa		4.21	□□□□□ -1.74
PTC1	YDL006W	SSN8	P47821	323 aa		4.21	□□□□□ -1.74
PTC1	YDL006W	TRF5	P48561	642 aa	Known RBP	4.21	□□□□□ -1.74
PTC1	YDL006W	TOM22	P49334	152 aa		4.21	□□□□□ -1.74
PTC1	YDL006W	ACL4	Q03771	387 aa		4.21	□□□□□ -1.74
PTC1	YDL006W	RTN1	Q04947	295 aa	Known RBP	4.21	□□□□□ -1.74
PTC1	YDL006W	MDM30	Q05930	598 aa		4.21	□□□□□ -1.74
PTC1	YDL006W	SFH1	Q06168	426 aa		4.21	□□□□□ -1.74
PTC1	YDL006W	LDB18	Q07887	179 aa		4.21	□□□□□ -1.74
PTC1	YDL006W	CUE5	Q08412	411 aa	Known RBP	4.21	□□□□□ -1.74
PTC1	YDL006W	PGC1	Q08959	321 aa		4.21	□□□□□ -1.74
PTC1	YDL006W	URA4	P20051	364 aa		4.2	□□□□□ -1.74
PTC1	YDL006W	RPI1	P23250	407 aa	Known RBP	4.2	□□□□□ -1.74
PTC1	YDL006W	RNA14	P25298	677 aa	Known RBP	4.2	□□□□□ -1.74
PTC1	YDL006W	RHB1	P25378	209 aa		4.2	□□□□□ -1.74
PTC1	YDL006W	YCL068C	P25593	260 aa		4.2	□□□□□ -1.74
PTC1	YDL006W	YCR100C	P25606	316 aa		4.2	□□□□□ -1.74
PTC1	YDL006W	BRF1	P29056	596 aa		4.2	□□□□□ -1.74
PTC1	YDL006W	APE2	P32454	952 aa	Known RBP	4.2	□□□□□ -1.74
PTC1	YDL006W	COY1	P34237	679 aa		4.2	□□□□□ -1.74
PTC1	YDL006W	ZIM17	P42844	174 aa		4.2	□□□□□ -1.74
PTC1	YDL006W	CTK3	P46963	296 aa	Predicted RBP	4.2	□□□□□ -1.74
PTC1	YDL006W	ASN2	P49090	572 aa	Known RBP	4.2	□□□□□ -1.74
PTC1	YDL006W	YIP1	P53039	248 aa		4.2	□□□□□ -1.74
PTC1	YDL006W	YGL260W	P53056	76 aa		4.2	□□□□□ -1.74
PTC1	YDL006W	TIM13	P53299	105 aa		4.2	□□□□□ -1.74
PTC1	YDL006W	CDC14	Q00684	551 aa		4.2	□□□□□ -1.74
PTC1	YDL006W	MRP51	Q02950	344 aa		4.2	□□□□□ -1.74
PTC1	YDL006W	TAF12	Q03761	539 aa		4.2	□□□□□ -1.74
PTC1	YDL006W	YDR387C	Q04162	555 aa		4.2	□□□□□ -1.74
PTC1	YDL006W	YMR130W	Q04223	302 aa		4.2	□□□□□ -1.74
PTC1	YDL006W	SGT1	Q08446	395 aa		4.2	□□□□□ -1.74
PTC1	YDL006W	YOR387C	Q08910	206 aa		4.2	□□□□□ -1.74
PTC1	YDL006W	COX5A	P00424	153 aa		4.19	□□□□□ -1.74
PTC1	YDL006W	TEF1	P02994	458 aa	Known RBP	4.19	□□□□□ -1.74
PTC1	YDL006W	HEM2	P05373	342 aa		4.19	□□□□□ -1.74
PTC1	YDL006W	MCK1	P21965	375 aa	Known RBP	4.19	□□□□□ -1.74
PTC1	YDL006W	ERV1	P27882	189 aa		4.19	□□□□□ -1.74
PTC1	YDL006W	ATS1	P31386	333 aa		4.19	□□□□□ -1.74
PTC1	YDL006W	KAR9	P32526	644 aa		4.19	□□□□□ -1.74
PTC1	YDL006W	SMI1	P32566	505 aa		4.19	□□□□□ -1.74
PTC1	YDL006W	YCR041W	P37265	110 aa		4.19	□□□□□ -1.74
PTC1	YDL006W	ETR1	P38071	380 aa		4.19	□□□□□ -1.74
PTC1	YDL006W	ART5	P53244	586 aa	Known RBP	4.19	□□□□□ -1.74
PTC1	YDL006W	PCP1	P53259	346 aa		4.19	□□□□□ -1.74
PTC1	YDL006W	CAF40	P53829	373 aa		4.19	□□□□□ -1.74
PTC1	YDL006W	IMP4	P53941	290 aa	Known RBP	4.19	□□□□□ -1.74
PTC1	YDL006W	RPN9	Q04062	393 aa	Known RBP	4.19	□□□□□ -1.74
PTC1	YDL006W	DCS1	Q06151	350 aa		4.19	□□□□□ -1.74
PTC1	YDL006W	YET3	Q07451	203 aa		4.19	□□□□□ -1.74
PTC1	YDL006W	OCA6	Q12454	224 aa		4.19	□□□□□ -1.74
PTC1	YDL006W	GDH1	P07262	454 aa	Known RBP	4.18	□□□□□ -1.74
PTC1	YDL006W	SSC1	P0CS90	654 aa	Known RBP	4.18	□□□□□ -1.74
PTC1	YDL006W	HOM3	P10869	527 aa		4.18	□□□□□ -1.74
PTC1	YDL006W	SCH9	P11792	824 aa	Known RBP	4.18	□□□□□ -1.74
PTC1	YDL006W	ARF2	P19146	181 aa	Known RBP	4.18	□□□□□ -1.74
PTC1	YDL006W	DAL81	P21657	970 aa		4.18	□□□□□ -1.74
PTC1	YDL006W	MRPL8	P22353	238 aa		4.18	□□□□□ -1.74
PTC1	YDL006W	NIP1	P32497	812 aa	Known RBP	4.18	□□□□□ -1.74
PTC1	YDL006W	GLC7	P32598	312 aa	Known RBP	4.18	□□□□□ -1.74
PTC1	YDL006W	MAK5	P38112	773 aa	Predicted RBP	4.18	□□□□□ -1.74
PTC1	YDL006W	MED6	P38782	295 aa		4.18	□□□□□ -1.74
PTC1	YDL006W	LRP1	P38801	184 aa	Known RBP	4.18	□□□□□ -1.74
PTC1	YDL006W	HEM14	P40012	539 aa		4.18	□□□□□ -1.74
PTC1	YDL006W	CHS6	P40955	746 aa		4.18	□□□□□ -1.74
PTC1	YDL006W	IDP2	P41939	412 aa		4.18	□□□□□ -1.74
PTC1	YDL006W	AVT4	P50944	713 aa		4.18	□□□□□ -1.74
PTC1	YDL006W	POP6	P53218	158 aa		4.18	□□□□□ -1.74
PTC1	YDL006W	FAR8	Q05040	523 aa		4.18	□□□□□ -1.74
PTC1	YDL006W	RTT103	Q05543	409 aa		4.18	□□□□□ -1.74
PTC1	YDL006W	CMS1	Q07897	291 aa	Known RBP	4.18	□□□□□ -1.74
PTC1	YDL006W	YLR053C	Q12026	108 aa		4.18	□□□□□ -1.74
PTC1	YDL006W	NCA2	Q12374	616 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms