RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W ARF1P11076 181 aaKnown RBP1.96□□□□□ -2.1
MSL1YIR009W GCD2P12754 651 aaPredicted RBP1.96□□□□□ -2.1
MSL1YIR009W CLN3P13365 580 aa1.96□□□□□ -2.1
MSL1YIR009W CPR1P14832 162 aaKnown RBP1.96□□□□□ -2.1
MSL1YIR009W TIP1P27654 210 aaPredicted RBP1.96□□□□□ -2.1
MSL1YIR009W ITR1P30605 584 aa1.96□□□□□ -2.1
MSL1YIR009W HMX1P32339 317 aa1.96□□□□□ -2.1
MSL1YIR009W GLC7P32598 312 aaKnown RBP1.96□□□□□ -2.1
MSL1YIR009W PAD1P33751 242 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
MSL1YIR009W SWD3P38123 315 aa1.96□□□□□ -2.1
MSL1YIR009W RTC2P38279 296 aa1.96□□□□□ -2.1
MSL1YIR009W SWC5P38326 303 aa1.96□□□□□ -2.1
MSL1YIR009W NDT80P38830 627 aa1.96□□□□□ -2.1
MSL1YIR009W LIN1P38852 340 aaPredicted RBP1.96□□□□□ -2.1
MSL1YIR009W MNN9P39107 395 aaKnown RBP1.96□□□□□ -2.1
MSL1YIR009W PRP39P39682 629 aaKnown RBP1.96□□□□□ -2.1
MSL1YIR009W GCD10P41814 478 aa1.96□□□□□ -2.1
MSL1YIR009W AIP1P46680 615 aaKnown RBP1.96□□□□□ -2.1
MSL1YIR009W TOS2P50078 622 aa1.96□□□□□ -2.1
MSL1YIR009W AZR1P50080 613 aa1.96□□□□□ -2.1
MSL1YIR009W YNR048WP53740 393 aa1.96□□□□□ -2.1
MSL1YIR009W GOR1P53839 350 aa1.96□□□□□ -2.1
MSL1YIR009W MRP51Q02950 344 aa1.96□□□□□ -2.1
MSL1YIR009W ODC1Q03028 310 aa1.96□□□□□ -2.1
MSL1YIR009W URH1Q04179 340 aa1.96□□□□□ -2.1
MSL1YIR009W BUR2Q05949 395 aa1.96□□□□□ -2.1
MSL1YIR009W SGT1Q08446 395 aa1.96□□□□□ -2.1
MSL1YIR009W SKI7Q08491 747 aaPredicted RBP1.96□□□□□ -2.1
MSL1YIR009W HRT3Q12347 344 aa1.96□□□□□ -2.1
MSL1YIR009W NCA2Q12374 616 aa1.96□□□□□ -2.1
MSL1YIR009W RRP36Q12481 300 aaPredicted RBP1.96□□□□□ -2.1
MSL1YIR009W TRM3Q07527 1436 aa1.96□□□□□ -2.1
MSL1YIR009W SUP35P05453 685 aaKnown RBP1.95□□□□□ -2.1
MSL1YIR009W CIN8P27895 1000 aa1.95□□□□□ -2.1
MSL1YIR009W YPS1P32329 569 aa1.95□□□□□ -2.1
MSL1YIR009W PRS1P32895 427 aaKnown RBP1.95□□□□□ -2.1
MSL1YIR009W MRP4P32902 394 aa1.95□□□□□ -2.1
MSL1YIR009W SPT10P35208 640 aa1.95□□□□□ -2.1
MSL1YIR009W KKQ8P36004 724 aa1.95□□□□□ -2.1
MSL1YIR009W RIB5P38145 238 aa1.95□□□□□ -2.1
MSL1YIR009W YIL067CP40514 678 aa1.95□□□□□ -2.1
MSL1YIR009W TOS3P43637 560 aa1.95□□□□□ -2.1
MSL1YIR009W STE24P47154 453 aa1.95□□□□□ -2.1
MSL1YIR009W ARK1P53974 638 aa1.95□□□□□ -2.1
MSL1YIR009W CCE1Q03702 353 aa1.95□□□□□ -2.1
MSL1YIR009W PBA1Q05778 276 aa1.95□□□□□ -2.1
MSL1YIR009W STE23Q06010 1027 aa1.95□□□□□ -2.1
MSL1YIR009W YPR078CQ06813 372 aa1.95□□□□□ -2.1
MSL1YIR009W RRG7Q08774 242 aaPredicted RBP1.95□□□□□ -2.1
MSL1YIR009W SNX3Q08826 162 aaKnown RBP1.95□□□□□ -2.1
MSL1YIR009W SRL2Q12020 392 aa1.95□□□□□ -2.1
MSL1YIR009W APC2Q12440 853 aa1.95□□□□□ -2.1
MSL1YIR009W YIL002W-AQ3E7Z5 69 aa1.95□□□□□ -2.1
MSL1YIR009W YOR338WQ99326 363 aa1.95□□□□□ -2.1
MSL1YIR009W HHF1P02309 103 aaKnown RBP1.94□□□□□ -2.1
MSL1YIR009W RPL18AP0CX49 186 aaKnown RBP1.94□□□□□ -2.1
MSL1YIR009W RPL18BP0CX50 186 aaKnown RBP1.94□□□□□ -2.1
MSL1YIR009W HEM15P16622 393 aa1.94□□□□□ -2.1
MSL1YIR009W CKI1P20485 582 aa1.94□□□□□ -2.1
MSL1YIR009W RAD23P32628 398 aaKnown RBP1.94□□□□□ -2.1
MSL1YIR009W MRPL37P36532 105 aa1.94□□□□□ -2.1
MSL1YIR009W GEP4P38812 185 aa1.94□□□□□ -2.1
MSL1YIR009W VPS45P38932 577 aa1.94□□□□□ -2.1
MSL1YIR009W MST28P39552 234 aa1.94□□□□□ -2.1
MSL1YIR009W SIM1P40472 476 aa1.94□□□□□ -2.1
MSL1YIR009W LYS12P40495 371 aaKnown RBP1.94□□□□□ -2.1
MSL1YIR009W OST1P41543 476 aaKnown RBP1.94□□□□□ -2.1
MSL1YIR009W YGL185CP53100 379 aa1.94□□□□□ -2.1
MSL1YIR009W ALF1P53904 254 aa1.94□□□□□ -2.1
MSL1YIR009W APJ1P53940 528 aa1.94□□□□□ -2.1
MSL1YIR009W EGD1Q02642 157 aaKnown RBP1.94□□□□□ -2.1
MSL1YIR009W RRN11Q04712 507 aa1.94□□□□□ -2.1
MSL1YIR009W MSC3Q05812 728 aa1.94□□□□□ -2.1
MSL1YIR009W APC5Q08683 685 aa1.94□□□□□ -2.1
MSL1YIR009W YOP1Q12402 180 aa1.94□□□□□ -2.1
MSL1YIR009W AHC1Q12433 566 aa1.94□□□□□ -2.1
MSL1YIR009W AIM45Q12480 344 aaKnown RBP1.94□□□□□ -2.1
MSL1YIR009W PAN1P32521 1480 aa1.94□□□□□ -2.1
MSL1YIR009W SCC2Q04002 1493 aa1.94□□□□□ -2.1
MSL1YIR009W POM152P39685 1337 aa1.93□□□□□ -2.1
MSL1YIR009W SSC1P0CS90 654 aaKnown RBP1.93□□□□□ -2.1
MSL1YIR009W RPS16AP0CX51 143 aaKnown RBP1.93□□□□□ -2.1
MSL1YIR009W RPS16BP0CX52 143 aaKnown RBP1.93□□□□□ -2.1
MSL1YIR009W RNA1P11745 407 aaKnown RBP1.93□□□□□ -2.1
MSL1YIR009W CAP2P13517 287 aa1.93□□□□□ -2.1
MSL1YIR009W EXG1P23776 448 aaKnown RBP1.93□□□□□ -2.1
MSL1YIR009W PET18P25362 215 aa1.93□□□□□ -2.1
MSL1YIR009W YCL068CP25593 260 aa1.93□□□□□ -2.1
MSL1YIR009W ICL1P28240 557 aaPredicted RBP1.93□□□□□ -2.1
MSL1YIR009W ARO2P28777 376 aaKnown RBP1.93□□□□□ -2.1
MSL1YIR009W BUD2P33314 1104 aa1.93□□□□□ -2.1
MSL1YIR009W SKT5P34226 696 aa1.93□□□□□ -2.1
MSL1YIR009W YUH1P35127 236 aa1.93□□□□□ -2.1
MSL1YIR009W MYO3P36006 1272 aa1.93□□□□□ -2.1
MSL1YIR009W NAT2P37293 288 aa1.93□□□□□ -2.1
MSL1YIR009W CHK1P38147 527 aa1.93□□□□□ -2.1
MSL1YIR009W SEC9P40357 651 aa1.93□□□□□ -2.1
MSL1YIR009W REE1P40893 198 aa1.93□□□□□ -2.1
MSL1YIR009W YFL067WP43537 175 aa1.93□□□□□ -2.1
MSL1YIR009W RRT5P43607 289 aa1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms