RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C YJR054WP47114 497 aa3.71□□□□□ -1.82
SDS3YIL084C FLC3P53121 802 aa3.71□□□□□ -1.82
SDS3YIL084C MZM1Q03429 123 aaPredicted RBP3.71□□□□□ -1.82
SDS3YIL084C YTH1Q06102 208 aaPredicted RBP3.71□□□□□ -1.82
SDS3YIL084C REX4Q08237 289 aa3.71□□□□□ -1.82
SDS3YIL084C NAG1Q8TGN9 163 aa3.71□□□□□ -1.82
SDS3YIL084C CLB1P24868 471 aa3.7□□□□□ -1.82
SDS3YIL084C SNT1P25357 1226 aa3.7□□□□□ -1.82
SDS3YIL084C CPR3P25719 182 aa3.7□□□□□ -1.82
SDS3YIL084C BEM1P29366 551 aa3.7□□□□□ -1.82
SDS3YIL084C HIR2P32480 875 aa3.7□□□□□ -1.82
SDS3YIL084C SWI3P32591 825 aa3.7□□□□□ -1.82
SDS3YIL084C MRP4P32902 394 aa3.7□□□□□ -1.82
SDS3YIL084C PXA2P34230 853 aa3.7□□□□□ -1.82
SDS3YIL084C URA8P38627 578 aaPredicted RBP3.7□□□□□ -1.82
SDS3YIL084C SRP72P38688 640 aaKnown RBP3.7□□□□□ -1.82
SDS3YIL084C DSE1P40077 573 aa3.7□□□□□ -1.82
SDS3YIL084C SAS2P40963 338 aa3.7□□□□□ -1.82
SDS3YIL084C GCD10P41814 478 aa3.7□□□□□ -1.82
SDS3YIL084C YFL067WP43537 175 aa3.7□□□□□ -1.82
SDS3YIL084C CAK1P43568 368 aaPredicted RBP3.7□□□□□ -1.82
SDS3YIL084C TRS85P46944 698 aa3.7□□□□□ -1.82
SDS3YIL084C MSO1P53604 210 aaKnown RBP3.7□□□□□ -1.82
SDS3YIL084C WSC2P53832 503 aa3.7□□□□□ -1.82
SDS3YIL084C SWS2P53937 143 aa3.7□□□□□ -1.82
SDS3YIL084C KTR5P53966 522 aaPredicted RBP3.7□□□□□ -1.82
SDS3YIL084C MRP51Q02950 344 aa3.7□□□□□ -1.82
SDS3YIL084C RTN1Q04947 295 aaKnown RBP3.7□□□□□ -1.82
SDS3YIL084C TLG2Q08144 397 aa3.7□□□□□ -1.82
SDS3YIL084C YPL199CQ08954 240 aa3.7□□□□□ -1.82
SDS3YIL084C MED2Q12124 431 aa3.7□□□□□ -1.82
SDS3YIL084C ISN1Q99312 450 aa3.7□□□□□ -1.82
SDS3YIL084C UBR1P19812 1950 aa3.69□□□□□ -1.82
SDS3YIL084C NAT1P12945 854 aaKnown RBP3.69□□□□□ -1.82
SDS3YIL084C URA4P20051 364 aa3.69□□□□□ -1.82
SDS3YIL084C RHB1P25378 209 aa3.69□□□□□ -1.82
SDS3YIL084C URA7P28274 579 aaKnown RBP3.69□□□□□ -1.82
SDS3YIL084C ECM13P38195 257 aa3.69□□□□□ -1.82
SDS3YIL084C TAE1P38340 232 aa3.69□□□□□ -1.82
SDS3YIL084C KRE9P39005 276 aa3.69□□□□□ -1.82
SDS3YIL084C DSN1P40568 576 aa3.69□□□□□ -1.82
SDS3YIL084C MKT1P40850 830 aaKnown RBP3.69□□□□□ -1.82
SDS3YIL084C TOS3P43637 560 aa3.69□□□□□ -1.82
SDS3YIL084C EMC4P53073 190 aa3.69□□□□□ -1.82
SDS3YIL084C HOT1Q03213 719 aa3.69□□□□□ -1.82
SDS3YIL084C TRM82Q03774 444 aa3.69□□□□□ -1.82
SDS3YIL084C YMR130WQ04223 302 aa3.69□□□□□ -1.82
SDS3YIL084C YML096WQ04489 525 aa3.69□□□□□ -1.82
SDS3YIL084C SGT1Q08446 395 aa3.69□□□□□ -1.82
SDS3YIL084C HNT3Q08702 217 aa3.69□□□□□ -1.82
SDS3YIL084C RPN8Q08723 338 aaKnown RBP3.69□□□□□ -1.82
SDS3YIL084C PAB1P04147 577 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
SDS3YIL084C SPT15P13393 240 aaKnown RBP3.68□□□□□ -1.82
SDS3YIL084C DAL82P21705 255 aa3.68□□□□□ -1.82
SDS3YIL084C RNA14P25298 677 aaKnown RBP3.68□□□□□ -1.82
SDS3YIL084C PSO2P30620 661 aa3.68□□□□□ -1.82
SDS3YIL084C KDX1P36005 433 aa3.68□□□□□ -1.82
SDS3YIL084C NAT2P37293 288 aa3.68□□□□□ -1.82
SDS3YIL084C RFC3P38629 340 aa3.68□□□□□ -1.82
SDS3YIL084C YHR218WP38899 603 aa3.68□□□□□ -1.82
SDS3YIL084C ZIM17P42844 174 aa3.68□□□□□ -1.82
SDS3YIL084C RRT5P43607 289 aa3.68□□□□□ -1.82
SDS3YIL084C CPR7P47103 393 aa3.68□□□□□ -1.82
SDS3YIL084C NUP84P52891 726 aa3.68□□□□□ -1.82
SDS3YIL084C IBD2P53892 351 aa3.68□□□□□ -1.82
SDS3YIL084C SAM4Q08985 325 aaKnown RBP3.68□□□□□ -1.82
SDS3YIL084C YPL278CQ08990 100 aa3.68□□□□□ -1.82
SDS3YIL084C SCEIP03882 235 aa3.67□□□□□ -1.82
SDS3YIL084C ARG4P04076 463 aaPredicted RBP3.67□□□□□ -1.82
SDS3YIL084C PMR1P13586 950 aa3.67□□□□□ -1.82
SDS3YIL084C CPR2P23285 205 aa3.67□□□□□ -1.82
SDS3YIL084C TIP1P27654 210 aaPredicted RBP3.67□□□□□ -1.82
SDS3YIL084C VMA8P32610 256 aaKnown RBP3.67□□□□□ -1.82
SDS3YIL084C PTI1P39927 425 aaPredicted RBP3.67□□□□□ -1.82
SDS3YIL084C YJR079WP47126 109 aa3.67□□□□□ -1.82
SDS3YIL084C HMS2P47175 358 aa3.67□□□□□ -1.82
SDS3YIL084C PRP24P49960 444 aaKnown RBP3.67□□□□□ -1.82
SDS3YIL084C COG7P53195 279 aa3.67□□□□□ -1.82
SDS3YIL084C ACL4Q03771 387 aa3.67□□□□□ -1.82
SDS3YIL084C MDM30Q05930 598 aa3.67□□□□□ -1.82
SDS3YIL084C DIS3Q08162 1001 aaKnown RBP3.67□□□□□ -1.82
SDS3YIL084C TIM18Q08749 192 aa3.67□□□□□ -1.82
SDS3YIL084C RKM1Q08961 583 aaPredicted RBP3.67□□□□□ -1.82
SDS3YIL084C VPS54Q12071 889 aa3.67□□□□□ -1.82
SDS3YIL084C PER33Q12144 273 aa3.67□□□□□ -1.82
SDS3YIL084C CDC42P19073 191 aa3.66□□□□□ -1.82
SDS3YIL084C CLN1P20437 546 aa3.66□□□□□ -1.82
SDS3YIL084C SPS22P25380 463 aa3.66□□□□□ -1.82
SDS3YIL084C ERV1P27882 189 aa3.66□□□□□ -1.82
SDS3YIL084C CIN8P27895 1000 aa3.66□□□□□ -1.82
SDS3YIL084C CWP1P28319 239 aa3.66□□□□□ -1.82
SDS3YIL084C RRT2P38332 387 aa3.66□□□□□ -1.82
SDS3YIL084C PCA1P38360 1216 aa3.66□□□□□ -1.82
SDS3YIL084C LYS1P38998 373 aaRIP-Chip data3.66□□□□□ -1.82not detected
SDS3YIL084C NBP35P52920 328 aa3.66□□□□□ -1.82
SDS3YIL084C FRE4P53746 719 aa3.66□□□□□ -1.82
SDS3YIL084C AIM32Q04689 311 aa3.66□□□□□ -1.82
SDS3YIL084C DCS1Q06151 350 aa3.66□□□□□ -1.82
SDS3YIL084C YOL075CQ08234 1294 aa3.66□□□□□ -1.82
SDS3YIL084C YPR022CQ12139 1133 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 395.8 ms